Cmac007317.1
Basic Information
- Insect
- Callosobruchus maculatus
- Gene Symbol
- -
- Assembly
- GCA_900659725.1
- Location
- CAACVG010007269.1:92819-105889[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 8.6 7.6e+03 -2.8 0.7 19 28 192 201 190 216 0.59 2 8 9.5 8.3e+03 -3.0 5.3 12 34 214 238 203 241 0.75 3 8 0.0014 1.2 9.3 0.9 22 44 302 324 291 324 0.75 4 8 1.8e-05 0.016 15.3 0.4 18 44 334 357 329 357 0.95 5 8 0.047 41 4.4 3.1 14 44 365 392 359 392 0.86 6 8 0.00011 0.097 12.8 0.9 18 43 402 424 397 425 0.93 7 8 0.0062 5.4 7.2 2.4 16 44 435 460 427 460 0.73 8 8 0.00027 0.24 11.6 0.1 18 40 470 489 466 491 0.84
Sequence Information
- Coding Sequence
- ATGGATGAAATGGTTAAGATTGAAGAATCTGTGCTGGAGTTAGTTGAAGAAGAGTTAGATGTCAAGCAGTCTACTGAAGAATCTGATGTGAAAACTGAAATGAAGACAAGTCCAAGGCCTATAGATATTAAAAATGAGATTAATGcagatggaaagataaaaagAATAAAACGTGAAAATCAGGGCTGTGATGAATTACCAATATTTACAAACAACATTGTCAAGATTGAAAAAGATGAACCAGGAATGCAAGTTGAAGCCAAAGTACGTTATATGGATACTGTACAGTTAAATGAAGAATTGATTATCAAAGATGAAATTTGCGCAGAATCAGAATGTCCAGCTATCAAGAGGATAAAAACTGAACATGACACTGCAAAATGGAATGGATCGGATTTGACTATGGCAAGTATGGCAGTTAAAGCTGATCTAGATGTCAGCTTGCCTCATACTGAGTTTGATATCAAGGATGAAAGCTATTCAGACACAACGGCCAGTGTCACGAAAAATGGATTACCGAGAAAAAGTCAAGAAGTACTAGCTGATAAAGAGACTGATGGGGACACATTTTTTTGCTATCACTGCGAATACGCCGCTAGAAGTAAATGCCATTTAATTGATCACATGAAAGTGCATAGGAGCaggaaatatatttacagctgtTGTTATTGTGATTTCCAAACAAATTCAGGAAGATTGTTTACTACCCACAATAAGACACATTCATCAGAAAGTGCGGAATATGAGGTGTTACATATGAAAGACAAACATGTGGATGACAAATTCAGTCGAGGGAATACCATGTTGATCGATTCACAAACTCATGTACTCAATAAAAGTTCCAGTAGAGGCAGAAAAAGACATCCTACTTTTAGAGCGTCCGTTAGTAAAACAGTCCTCGGGTGTACTAAGTGCACCTACGAATCTACGAATGTTAAATGTCTCAGGGAACATTTAATGATAAAACATCCCGAAATATCTGGTAATCGCATTCTTACtagatgtatctactgtaaTAAGACGTTTAAAAGTAAACAAGGACTGGATGATCACATAGTGAAAAGACATCCGGATTTTATAGCATCAGTTAGCAGGAAGATTCACGAATGTACtcagtgcacttataaaactacgTATGTTAGATGTCTCAGGGAACATTTAATGATAAAACATCCCGAAATATCTGGTAATCGTATTCTTACtagatgtatctactgtaaTAAGACGTTTAAAAGTAAACAAGGACTGGATGATCACATCGTGAAAAGACATCTGGATTTTATAGCATCAGTTAGCAGCAAGATTCACGAATGTACTCAGTGCACATATAAAACTACGAATGTTAAATGTCTTAGGGAACATTTAATGATAAGACATCCCGAATTATCTGGTAATCGCATTCTTACtagatgtatctactgtaaTAAGACGTTTAAAGGTAAATCAGGACTGGATGATCACATAGTGAAAGACATCCGGATTTTATAG
- Protein Sequence
- MDEMVKIEESVLELVEEELDVKQSTEESDVKTEMKTSPRPIDIKNEINADGKIKRIKRENQGCDELPIFTNNIVKIEKDEPGMQVEAKVRYMDTVQLNEELIIKDEICAESECPAIKRIKTEHDTAKWNGSDLTMASMAVKADLDVSLPHTEFDIKDESYSDTTASVTKNGLPRKSQEVLADKETDGDTFFCYHCEYAARSKCHLIDHMKVHRSRKYIYSCCYCDFQTNSGRLFTTHNKTHSSESAEYEVLHMKDKHVDDKFSRGNTMLIDSQTHVLNKSSSRGRKRHPTFRASVSKTVLGCTKCTYESTNVKCLREHLMIKHPEISGNRILTRCIYCNKTFKSKQGLDDHIVKRHPDFIASVSRKIHECTQCTYKTTYVRCLREHLMIKHPEISGNRILTRCIYCNKTFKSKQGLDDHIVKRHLDFIASVSSKIHECTQCTYKTTNVKCLREHLMIRHPELSGNRILTRCIYCNKTFKGKSGLDDHIVKDIRIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -