Basic Information

Gene Symbol
-
Assembly
GCA_900659725.1
Location
CAACVG010010059.1:485454-486640[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-08 0.00011 22.4 0.2 1 45 84 139 84 140 0.89
2 2 1 2.5e+03 -1.2 0.1 1 12 216 227 216 228 0.82

Sequence Information

Coding Sequence
ATGAGTATGAATCAAGAGTTAATCCTGCAGAAGGGTATccattctgcagtagtggatgAAAACGGCGCTTTACAAACTGACGAATTGGGACGCTGTTTGATATACGACAACAGCCAGCAGAAAGTGTTAGCTGTGAACCCCACTGCAGAGGTTATGGAATTCCTTGGAGTAGTTAACCATGAAGAAATGGACATGCCTCAGCACGGGCAAGTGCAAGTAGATGAAATGGAACTGGAGAACAGAGACGTTCGACGTCCTTGGTCCAGGGCTGACATTGAATCATTGATTcatctatataaaaaatatgaaattcattttaaaagcACTACTGTGAAAAATGACAAAGTGTGGTCACTTATATCTGGCGATCTAAAAACACATACTTCTGAGCAGtgcaaaaacaaatttaagtATTTAAAGGCAAAATACTTGGAAAAAAAAGACAATATGTCTCCTAAAGCTTCAGGAGCAAAAGCCATAAGGTTTGAATATTTTGACCACTTAAATGATATTTTTGGCAAAGAACCCATTGTAACACCAGTGGCCATAGCATCATCCAGTAAAGGCctacaaaattttgaagcaCTGCCTGATGTAGACACAATGGACGAGAGTGAGGAAGAAACAATAaactataaaactaaaaaaagaaagTGGAGTGCCTTAGAGAATGAACTCATCAAATATGACTCCAACCTCCAACAAAGGGAGGAGAACACTGAAAGGCGACATAAAGAAACTCTAGAACGACAGGATAAAGCATTGAATATTTTGGAAAGAATGGtcactgtttttgaaaaaagtgtttCCAAATga
Protein Sequence
MSMNQELILQKGIHSAVVDENGALQTDELGRCLIYDNSQQKVLAVNPTAEVMEFLGVVNHEEMDMPQHGQVQVDEMELENRDVRRPWSRADIESLIHLYKKYEIHFKSTTVKNDKVWSLISGDLKTHTSEQCKNKFKYLKAKYLEKKDNMSPKASGAKAIRFEYFDHLNDIFGKEPIVTPVAIASSSKGLQNFEALPDVDTMDESEEETINYKTKKRKWSALENELIKYDSNLQQREENTERRHKETLERQDKALNILERMVTVFEKSVSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00260559;
90% Identity
iTF_00260559;
80% Identity
-