Cmac013102.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Callosobruchus maculatus
Gene Symbol
-
Assembly
GCA_900659725.1
Location
CAACVG010009433.1:139457-140735[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-08 2.4e-05 24.1 0.0 1 40 18 56 18 60 0.93

Sequence Information

Coding Sequence
aTGCCACGAATACATAAGCGCAAACTTGGGAGTCGGAAATACCATGACTATACACAAGAGACTCTAGAAAGGGCATTAAATAGTTTGAGAAGAGGACGACCTATACGACAGGTGGCTGAAGAATTTGGAATCTCCAAGTCTACACTGAGCCGTCATCGACGTGGACAACAAACAGGCAAAATTGGCAGACCGTGTGTATTCACTGAAGCGCAAGAAAATGTCATTGTTGATTGCATAGCATTGGCCGGCGAGTGGGGATTTCCTTTAGTCCCCTATGATATACGACTTATAGTAAAATCCTACCTAGATAGACAAGGAAAAAGTGAAAGGAGATTTAAGGCAAACCTCCCAGGAATAGAATGGCTACGAGCATTTTTGAAAAGACATAGTAATACATTAACTCAAAAACTATGTCAAAATGTAAAACGTGCCAGAGCCAGTGTTACTCGTGAGGTTATTCTCGATTATTTCACCGAGCTTTCAGTATCATTGGAACATGTAGACCCTGCTATGATAATAAATTATGATGAGACGAATATGACAGACGACCCAAAGCGTCAGAATGTCATAGTACGCAGAGGCTGTCGGCATCCACAAAGGATTGTTGACTCGACAAAAAGTAGTGTATCAGTTATGTTTTCAGCGACAGCCACAGGGCACTTATTACCTCCATACATAGTATATAGATCAGAGCACCTTTACAACACATGGACCGAAAATGGACCAAAAGGTGCAGTCTATAATAGATCTAAAAATGGTTGGTTTAATATGGAGCTATTCGAAGACTGGTTTATCGTGATAGTTCTCccatatttccaaaaatttgaaaaagaacTCCCCAAAGTTATGATTGGAGATAACTTGGCCAGCCATGTT
Protein Sequence
MPRIHKRKLGSRKYHDYTQETLERALNSLRRGRPIRQVAEEFGISKSTLSRHRRGQQTGKIGRPCVFTEAQENVIVDCIALAGEWGFPLVPYDIRLIVKSYLDRQGKSERRFKANLPGIEWLRAFLKRHSNTLTQKLCQNVKRARASVTREVILDYFTELSVSLEHVDPAMIINYDETNMTDDPKRQNVIVRRGCRHPQRIVDSTKSSVSVMFSATATGHLLPPYIVYRSEHLYNTWTENGPKGAVYNRSKNGWFNMELFEDWFIVIVLPYFQKFEKELPKVMIGDNLASHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00260549;
90% Identity
iTF_00260549;
80% Identity
iTF_00260549;