Basic Information

Gene Symbol
osa
Assembly
GCA_900659725.1
Location
CAACVG010011128.1:7808-44648[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-26 3.6e-22 78.7 0.0 2 89 7 91 6 91 0.95

Sequence Information

Coding Sequence
ATGGATGATAATCCAGACAGGAAAGCTTGGTTAGACAAGCTGCTAGCTTTCATGGAAGACGTACGGACACCAATAACCACGTGTCCGACCATTTCAAAGAATCCGCTCGATTTGTTCCGCTTGTATATATATGTTAAGGAGCGTGGGGGCTTTATGGAGgtgacaaaaaataaaacgtGGAAAGATATCGCTGGTATGCTGGGTATTGGTGCATCGTCTTCTGCCGCTTACACGCTGAGGAAACACTACACTAAGAATCTGTTAGCGTACGAATGTCAGTTTGACAGGGGCGGTATTGATCCTCAGCCCATCATAAACCAGGTGGAGGCGACATCGAAGAAAAAGGGAGCTAAGGCAACATCTGTACCGTCACCGGGATCTTCCAATTCGCAAGACTCGTTCCCTCCAGGGTCCGGCGGTGGGTCCATGGATGGGTATGGGTATGGTGGATATCCTCCTTCTGGCAATCCAGACTATCCGCAGCGACCTTCCTCTCAATCAGCGCCATCCCCGCATGGAGGTTCAGGGAGCGCTAACCACCTGCCGGGGTCTGGGGGCGGTCCGAGCCCTGGGGGCGGCGTGGGCGGCGACAATGTGAGCGTCTCGAACCCGTTCGACGACGTGTCGCCCAATAGCGGGGGCGGAGGCGGTCCGGGAGGTCGCGCGGGCGCGTACGCGAGCGCCGCCTCCGCGTATGGCTCGGGGGGCGGGCCCACCGCAGGGGGCGGGCCACAGTCGCAGCGGGCGCAGCAGGGGCAGCCCTATCAGGGACAAGCCCAGCCTGGGTACCAGTATCCCGGGCCGGGGCCGGGGCCGGGGCCTGGACAGCCCCCCGACCAGTACTACGCCGCCGCCGGTGGGTACGGGCCTGCTGGTAGGCCCGTATACCCACCTTATTCAGGAGACTCAGGTGGGCCACCACCAAGTCCAGGCAGCACCCAGGGTCCACCATCTTCTGGTGCTCAGGATCCGTACAATAGGTATAACGCGAATCCAGCTTCCGGTTATAATCCAAGACCTGGATATGGACAGACGCAAAACAGTGCAGGACCACCTACTTCTCAGCAACCGGCTGGGCCCGGAAACTATCCTCCACACCAGGATTACTACCGACCAGACCAAGTTCAGGGTGGAGGAAATGGAACAGGATATACTGGACAACCAGGTAATAAAACGATGCCACCACCAGGACCACAACCACCTAGGAGACATCCTGATTTTGCCAAAGATCAGCAGTATCCTTATAACCAACCTCGTGCCCCTATGTATGGAGGGTGGCCCAACAACAACCAGTATCGGCCGCCCCAATACGGAGGCACCCCCGGTGGTCCTCAAGTGACCCCGCAGCAGTGGAACCAGGGTTCGAGGACTAGCGGCCCTTGGCAAGGAAACCAAGGCTACCAACAGGCTCAACCTGGCCAACCTCCATGGCCGGGAATGAGCCAACCTGGAGGACAGAACGCGAACATGAGACCTGTCCACAGGCCAGGCAAACCCTATCCCAACATCATGCCACCAGGGGGCGCCAAGGGGACGCAACAACAACCACCTGTGAATTCGTATAGTCATAGCCAAATGCCGAAAAGGGAAATCACCTTCCCTCCTGATAGCGTCGAAGCTACGGTGCCGGTTTTGTACAGAAGAAAAAGGTTATGTAGGGCGGATTTGGGGCCAGTGGACGCGTGGCGAATCATAATGTGCCTGAGGTCAGGACTGTTGTCTGAAAGCACCTACGCGCTGGACATGCTGAACGTACTTCTGTTCGACGACACCTCCGTGGGGTACTTCGGGCTGAGCCAATGGCCAGGCCTGCTGGACCTCCTGCTCGAGCATTTCAAGCGGAACCTGGCGGACATGTTCGACGGGCCGTATCCTCGCGAGGACAACGACGAGAACCAAGAGGTCGACCTTGGGAGCGTCGTCAAACCCATCGATCCGAGTCTGAAGACCGTCGTGTTAAACAACACCACCAACTACTCGTTGGTCACGCGGAAGGGCCACCCAGTGAAGCTGATCGATCGACCTGAGGATATCTTTGTACAGGACAACCTCAAGGATTGGGATACGAAAGGAGATACCACCGACGCCAGTATTTTGGCAGAGATACCATCGGATCCGTGGCACACGTCCTCCGACCATATTCTGCCCCCTTTCCAGGCAGAGTTTGGCCGCATCCCGTTCCACATGCGCCTGCAGGACAAACCCGACAAAGAGCGGGAGGAGCAGGAGGACCAGGGGGAGGAGGTGGAGAGGAGGGCGAAGACTCCACCCCCGGACGAGGCGCCGCCTCCCACCAACACCACGAAAAACGGCGACAAGCGGCGGAGGATGAAGACCCTAAGTGATGTGATATCTCGAATTAAGAAGGACTCTTCTGAAGCTACCGAGACAACAGTCAAGACTGAAGTAGTGAGTGAAATGAACTGTGAGGAGCAGTCGAGTATAGATCTGAATATAAGTGTAAATGGAGAGTGTGGCGAATCAAAAGAACAGGAGttgCAGGAAGTGATCAAGGATCCAGCTGGCAATCTAAAACGACGGCGGATCTCTGACTACGAAGACGAGGCTTACACACGAGACGAAGCCAGTTTAGTTTTGATAACGGAGAGCCAGGACAACTTGGGTAAAAGGTGTGTCTGCATATCGAACATACTGCGAAGTCTCACCTTCATACCCGGCAACGAGACCGAGTTCTCGAAAAGCGCCTCCTTTCTGGCGCTGGTTGGGAAGCTGCTCTTATTGCACCACGAACACCCTCCTAGGACGCAAAAGACGAGAAATTACGATAGGGAGGAGGATGCCGACTTCGCAGATTCATGCAGCAGCTTGCAGGGCGAGAGCGAATGGTGGTGGGATTTCCTGGTCCAGATTCGAGAGAACATTCTGGTATCTCTAGCTAACATAGCGGGCCAGATAGACGTATCGATATTCGACGAAGACGTAGCGAGGCCATTGTTGGACGGGCTGCTCCACTGGGCCATCTGTCCCTCGGCTGCAGGACAAGACCCCTTCGCCTCCGTAGGGCCTTCGTCCTTGCTTTCTCCGCAGCGCTTGGCCCTCGAAGCGTTGTGCAAGCTGTGCGTCACCAACAGCAACGTAGATCTGGTGATCGCCACACCACCGTTTTCCAGGCTAGAAAGGCTTTGCGCTGTCCTTACGAAACATTTGTGCAGGTCAGAGGATCAGGTGCTTCGAGAATTCTCCATAAATCTACTGCATTATTTAGCAGCAGCAGATAGCAGTATGGCGAGAGTAGTTGCTTCACAGACACCTTGTGTATCGTTATTAGTAGCATTTATTGAACAGGCTGAAGTCAGTGCTCTAGGGGTGGCTAATCAACACGGTATAAGTGCGTTGAGGGAGAACCCAGATTCGATGGGAACCAGTTTGGACATGCTACGGCGAGCGGCAGCCACGTTGGTCTTCCTGGCAAGGCATCCGGAGAACAAAGCGTTGATGGTGCAACAAGAGTCGAGGTTACTCAATCTGGTCATGAGCCAGATACTCGATCAACAGGTGGCGCTTCTACTCTCCAAAGTGCTGTTCCAGATATCTCGCAGCTAA
Protein Sequence
MDDNPDRKAWLDKLLAFMEDVRTPITTCPTISKNPLDLFRLYIYVKERGGFMEVTKNKTWKDIAGMLGIGASSSAAYTLRKHYTKNLLAYECQFDRGGIDPQPIINQVEATSKKKGAKATSVPSPGSSNSQDSFPPGSGGGSMDGYGYGGYPPSGNPDYPQRPSSQSAPSPHGGSGSANHLPGSGGGPSPGGGVGGDNVSVSNPFDDVSPNSGGGGGPGGRAGAYASAASAYGSGGGPTAGGGPQSQRAQQGQPYQGQAQPGYQYPGPGPGPGPGQPPDQYYAAAGGYGPAGRPVYPPYSGDSGGPPPSPGSTQGPPSSGAQDPYNRYNANPASGYNPRPGYGQTQNSAGPPTSQQPAGPGNYPPHQDYYRPDQVQGGGNGTGYTGQPGNKTMPPPGPQPPRRHPDFAKDQQYPYNQPRAPMYGGWPNNNQYRPPQYGGTPGGPQVTPQQWNQGSRTSGPWQGNQGYQQAQPGQPPWPGMSQPGGQNANMRPVHRPGKPYPNIMPPGGAKGTQQQPPVNSYSHSQMPKREITFPPDSVEATVPVLYRRKRLCRADLGPVDAWRIIMCLRSGLLSESTYALDMLNVLLFDDTSVGYFGLSQWPGLLDLLLEHFKRNLADMFDGPYPREDNDENQEVDLGSVVKPIDPSLKTVVLNNTTNYSLVTRKGHPVKLIDRPEDIFVQDNLKDWDTKGDTTDASILAEIPSDPWHTSSDHILPPFQAEFGRIPFHMRLQDKPDKEREEQEDQGEEVERRAKTPPPDEAPPPTNTTKNGDKRRRMKTLSDVISRIKKDSSEATETTVKTEVVSEMNCEEQSSIDLNISVNGECGESKEQELQEVIKDPAGNLKRRRISDYEDEAYTRDEASLVLITESQDNLGKRCVCISNILRSLTFIPGNETEFSKSASFLALVGKLLLLHHEHPPRTQKTRNYDREEDADFADSCSSLQGESEWWWDFLVQIRENILVSLANIAGQIDVSIFDEDVARPLLDGLLHWAICPSAAGQDPFASVGPSSLLSPQRLALEALCKLCVTNSNVDLVIATPPFSRLERLCAVLTKHLCRSEDQVLREFSINLLHYLAAADSSMARVVASQTPCVSLLVAFIEQAEVSALGVANQHGISALRENPDSMGTSLDMLRRAAATLVFLARHPENKALMVQQESRLLNLVMSQILDQQVALLLSKVLFQISRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-