Basic Information

Insect: Calliphora vomitoria
Gene Symbol: -
Assembly: GCA_942486075.2
Location: CALNXM020000307.1:972094-977588[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0019 0.095 13.4 1.0 1 23 120 142 120 142 0.98

2 14 6 2.9e+02 2.4 3.8 1 23 148 171 148 171 0.94

3 14 6.7e-07 3.3e-05 24.3 0.9 3 23 385 405 383 405 0.97

4 14 0.074 3.6 8.4 1.0 1 23 456 479 456 479 0.96

5 14 1.8 88 4.1 2.0 2 23 543 564 542 564 0.94

6 14 0.098 4.8 8.0 4.6 2 23 743 764 742 764 0.96

7 14 0.19 9.4 7.1 3.2 1 23 770 793 770 793 0.96

8 14 0.046 2.3 9.1 0.4 1 23 867 890 867 890 0.97

9 14 1.7 82 4.2 2.8 1 21 1049 1069 1049 1070 0.93

10 14 0.088 4.3 8.2 8.9 1 23 1087 1109 1087 1109 0.98

11 14 0.00045 0.022 15.4 0.5 1 23 1114 1136 1114 1136 0.94

12 14 0.0034 0.17 12.6 7.4 1 23 1142 1165 1142 1165 0.94

13 14 0.0015 0.075 13.7 0.4 2 22 1171 1193 1170 1194 0.87

14 14 0.14 6.7 7.6 3.3 1 19 1200 1218 1200 1223 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0019	0.095	13.4	1.0	1	23	120	142	120	142	0.98
2	14	6	2.9e+02	2.4	3.8	1	23	148	171	148	171	0.94
3	14	6.7e-07	3.3e-05	24.3	0.9	3	23	385	405	383	405	0.97
4	14	0.074	3.6	8.4	1.0	1	23	456	479	456	479	0.96
5	14	1.8	88	4.1	2.0	2	23	543	564	542	564	0.94
6	14	0.098	4.8	8.0	4.6	2	23	743	764	742	764	0.96
7	14	0.19	9.4	7.1	3.2	1	23	770	793	770	793	0.96
8	14	0.046	2.3	9.1	0.4	1	23	867	890	867	890	0.97
9	14	1.7	82	4.2	2.8	1	21	1049	1069	1049	1070	0.93
10	14	0.088	4.3	8.2	8.9	1	23	1087	1109	1087	1109	0.98
11	14	0.00045	0.022	15.4	0.5	1	23	1114	1136	1114	1136	0.94
12	14	0.0034	0.17	12.6	7.4	1	23	1142	1165	1142	1165	0.94
13	14	0.0015	0.075	13.7	0.4	2	22	1171	1193	1170	1194	0.87
14	14	0.14	6.7	7.6	3.3	1	19	1200	1218	1200	1223	0.88

Sequence Information

Coding Sequence: ATGGGCGACAAGAAATTCGTACAGGATTACACCATGGTGTGTCGGACATGTCTGCAATCAAATGTGGAGATGCTAAATTTAAGCGCGCTTATCAATGATAATGTACAGGAAGAACATTCGAAAATATCATATATGGAATGTTTACAAATGTGCATACAAGTCGAGGAGGCGGTGGACATTGAGATGCCACACAATATTTGTTTAGAATGTGCGTCTGCCTTGCAAGTAGCTTACTGGTTCATGAAAAATGCTAGCCAAGCACAGGAGTTGTTGAAACTAAAATTGAGAGAAATTAAACGTAAAAAACAACAAATTATAGTTGAGATGGCGGCGGAAGAAATAAGAAAACCTAAAAGATATCGTTGCAAAATTTGCAATGTAAAGGTGGAAACAAAGAGATCTCTTAAAGACCACGTTAAACTACATTTAGATATTATTATATATAGCTGTCAAATATGTTCCTTTGAAAGTCACAATCGAAACAGTTTATGTGACCATTATATACAAATTCATGGTATAGAAGCCTCAAAGGAACAATTGAAACCAAAAACCAAGACATCAACGACTTCCTTTTCATCACCCGCTACGATAACATCCCAGGATCAAATGATGGGAGCCATAACAAATGAACATTTTCAAATATTACCCGAAGATACAACACAACAAACATCTTATGAAACATTTACCACAAATACGGGTTGCAGTAGTGGACCTCTCCAAGTGTCTACGATCATAACAACAGCACATCCTAATTACAGCACAATAACTGCACCATTCACGGCCTTGGAGGGTGATCTAAATAGTGTTTCAACTAATGATCTAAGCATGGCTAATGAATTTATGGTTATGGCTGATGGCAGTTTAGAAAAAGTTATAAACAAAGGGGTTGTTATAGAGTATATAAATGCTCCTAATAATACGAGCAATATTACTTTGGATAATGGCATTATTTTAGATAATATAATACAGGTGCAGAATATAGATAACTCGGTCATGCTGGAACCGCAAAATAATATTGTGCAAATGGATGTTGATGACATGATTATAGAAGATCAAGGCGATGTAATAGAAGAAACACAAGAACCAATCCCTCCGCCTCTTGAAGAGGAGATAATACCAGTTACGATTATTGAGCAGCCTAAGAAGATTATTTGTAAAATTTGTACCAAAGACTTCACGACACAAGAAAATTTAAAGAACCATATGCTAACTCACAATGAAATTCCCCACTTCTTTTGTGATCAATGTAAATTTTATACATTTTTTAAAATCGATTTACATCAACACTATAAAAGTAAACATAATTTACAACCGACCAACAAACAGTTACAACCCAAAAACAAACAAAGAGCCGCTAATGAGTTCTATGCCTGTGATTTGTGTTTTTATGAGTCCGAGACAAAGTCAGATATAAAAAGACATTACAAAGTTAAACATAATATAGAAGCCAACGAAATACATTTAAAGCCGACCAAAGCACAAATGTTGAATTCCAAATTGTCTCCGCTCTCTGCCAAGGCAAAGGCAGCCGCTATAGTAAGCAAAGCAACAACAGCAGCAGCATCATCTAAAAATGTTAAAATACGTTCCATCGAACAAACAACACCAGATTATCCAAATGGCCTAAATTGTCGCAAGTGTCATGAAGTGTTCTATTGGCGCAATGAACTGTACGAACATTATAAGTTGCATAATGCCGAAGAAGCGGCTCTCAAGCAAGAGAAACAAATTATTAAGGTTCAAGACAAGCCAACTTCAAATCTATATCAAAACAAGGCGAAAACCTCTAAGACGCCATCAGTTCAAACTCAAACAGTTACACATGCTCAGTTGGAAACAACGAACTCACCAACCTATTCTAGCTTAGATTCGTTGACGGCCTTAAATGTTACAACACCAAACAATACGACACACAATTTAATAGCTCCGTTGACACCATCTTCCAGTTCGACCTATACTTTACCCTCGGATGCCATACCGCAAATTGTGGAAACCGAACAAACCATAGAAAATGACATGGACTTCGATTTTAATGGTGACGATGATGCCTTGTTCGGCGATTTTGATGACGATGTTGATGTAGAAAACGATTCCGATGATAATGATACTGAATTTCGTAATGTTTTGTTAACGTCCGATGATGATTTAGAAGACATTTTACAGGAACAAAATAGTCTGAATAATGCTACCGACGAGGCGGCGACAGCGGCAACCACACGTGAATCTTATTGTGCCCATTGTCAGAAGTCTTTCTTAAGTCACTATCAATTTGAAAATCATATGTTTGTTCATAGAGGGCTGGCTCCTTATCGCTGTGAAATGTGCACAAATCTCTACAACACGAAACGTTGTTTGATACGCCACTACAAAGCTGTACATAAAAGTGTACCTACCCGAGATATGATCCAAGCCAAAGGTGATAAAGTGTGTGAAGATAAAACTCCAGTGGAACATTTAAAACTAGAAGAAACAACTTCAATTGCAGCTCATATGTGTGCTAAATGTCCTTATGAATCTTCAGAATTAAGCGATATTAAATTTCATCTCAATTCTAGTCATAATATAAGTGATGAATCCTATATAATGAAAAAACTTCCTTATGAGTGCCCGCGTTGTATACGATCATTCGCAAGTAATGTGAAAATTCTAAGGCATTTACAACGTAACCATAGTTCGAACCCAATTAATCAGCATCAAATACGATTCGAAAGTGCAGACAATGCATCCACGTCAATGGCAATAGCAACAAGCTCATCCGCAACATCAATTACAACAACAGTAAATAACCACGTAAATATGATGAATACAGAAACTAGTGAAACAAACGCAAGTTGCGGATACAATGATATATTCATTAAACAAGAACAAGGACAACATCAATGTCAACAACAACAACAACAGCACTCTTATCCAGACTCAACCAGAAAAAAACTGTCAATTGAAGATGCCGTAGCACCCAATGCTATTATGGCCCGCTTCCCAGCAGAATCTACCAGTTCAACAACATCTTTGGCTTATAATGAAACCATTACCAACAGCAGCGATAACTGCCCCATTACCAACATGCCTTCCAGCTCAACCAACTTTACCGCGGACTCGGTCGCACCAACCGCCCTAGACGAAACTGAGCTTGACCAACCCCTATTTAAATGTAAAATATGCCTTTTGACCTGCTACAATCTCGAATCTTTTAATGAACATAGCAAACGTATTGACTGCCGTAAATTTAGTTTTAATAGTCCCGGCGACCGAATGCTATTCGAGTGCGAAATATGCCATTGCTATTATAAAACCATGTATTTATTAAAACATCATCTCAAACGACACATAGGTAGGAAATTTCTCTGTGCCAATTGCCCTAAAACATTTATAAACAAAGTGGAATTGGAGGCCCACAAACATGTGCACAGCGGAGAGAGGCCACATAAATGTGATGTGTGTACGAAATCGTTTCGTTATGTCCATCATTTGAAACGTCACAAGGACAGTGTGCACTTTGGCAAACGTCACGCTTGTACCGTACCCAATTGTGGTCGAAAATTTACAACACTGGCTCAATTGAAAGTGCACATATGGACTCACAATGGCATTGTGCCCTACAAGTGTCCATATTGTAATCGTTTATTTAAAAAGAGATTGCTTCTGCGTGGACATTGCTTAAAAGTCCATAAAGTCATCTTGAGTGAAGAGGAAATGGCTGAAATATTCCGCAATAGTTTGGGCTATACAAATCCTCATGATTTTACTGTGACCATTGGCAATGGTAAAATGTTGCGTCGTGGTGATTTAGAAACAATGGGTGCTTCTGGCGTTATCAAATCTTCATTTAAGTAG
Protein Sequence: MGDKKFVQDYTMVCRTCLQSNVEMLNLSALINDNVQEEHSKISYMECLQMCIQVEEAVDIEMPHNICLECASALQVAYWFMKNASQAQELLKLKLREIKRKKQQIIVEMAAEEIRKPKRYRCKICNVKVETKRSLKDHVKLHLDIIIYSCQICSFESHNRNSLCDHYIQIHGIEASKEQLKPKTKTSTTSFSSPATITSQDQMMGAITNEHFQILPEDTTQQTSYETFTTNTGCSSGPLQVSTIITTAHPNYSTITAPFTALEGDLNSVSTNDLSMANEFMVMADGSLEKVINKGVVIEYINAPNNTSNITLDNGIILDNIIQVQNIDNSVMLEPQNNIVQMDVDDMIIEDQGDVIEETQEPIPPPLEEEIIPVTIIEQPKKIICKICTKDFTTQENLKNHMLTHNEIPHFFCDQCKFYTFFKIDLHQHYKSKHNLQPTNKQLQPKNKQRAANEFYACDLCFYESETKSDIKRHYKVKHNIEANEIHLKPTKAQMLNSKLSPLSAKAKAAAIVSKATTAAASSKNVKIRSIEQTTPDYPNGLNCRKCHEVFYWRNELYEHYKLHNAEEAALKQEKQIIKVQDKPTSNLYQNKAKTSKTPSVQTQTVTHAQLETTNSPTYSSLDSLTALNVTTPNNTTHNLIAPLTPSSSSTYTLPSDAIPQIVETEQTIENDMDFDFNGDDDALFGDFDDDVDVENDSDDNDTEFRNVLLTSDDDLEDILQEQNSLNNATDEAATAATTRESYCAHCQKSFLSHYQFENHMFVHRGLAPYRCEMCTNLYNTKRCLIRHYKAVHKSVPTRDMIQAKGDKVCEDKTPVEHLKLEETTSIAAHMCAKCPYESSELSDIKFHLNSSHNISDESYIMKKLPYECPRCIRSFASNVKILRHLQRNHSSNPINQHQIRFESADNASTSMAIATSSSATSITTTVNNHVNMMNTETSETNASCGYNDIFIKQEQGQHQCQQQQQQHSYPDSTRKKLSIEDAVAPNAIMARFPAESTSSTTSLAYNETITNSSDNCPITNMPSSSTNFTADSVAPTALDETELDQPLFKCKICLLTCYNLESFNEHSKRIDCRKFSFNSPGDRMLFECEICHCYYKTMYLLKHHLKRHIGRKFLCANCPKTFINKVELEAHKHVHSGERPHKCDVCTKSFRYVHHLKRHKDSVHFGKRHACTVPNCGRKFTTLAQLKVHIWTHNGIVPYKCPYCNRLFKKRLLLRGHCLKVHKVILSEEEMAEIFRNSLGYTNPHDFTVTIGNGKMLRRGDLETMGASGVIKSSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045734;
90% Identity: iTF_00045734;
80% Identity: -