Basic Information

Insect: Calliphora vomitoria
Gene Symbol: -
Assembly: GCA_942486075.2
Location: CALNXM020000059.1:125271-134923[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.007 0.34 11.7 0.4 1 21 980 1000 980 1004 0.92

2 8 0.0009 0.044 14.5 4.0 1 23 1503 1526 1503 1526 0.97

3 8 2.2e-05 0.0011 19.5 3.4 2 23 1553 1574 1553 1574 0.97

4 8 0.0001 0.0049 17.5 2.3 1 23 1580 1602 1580 1602 0.99

5 8 4e-06 0.0002 21.9 0.7 1 23 1608 1630 1608 1630 0.99

6 8 0.028 1.4 9.8 2.2 1 23 1636 1658 1636 1658 0.96

7 8 0.0018 0.089 13.5 0.1 2 23 1665 1686 1664 1686 0.96

8 8 0.0064 0.31 11.8 3.6 1 23 1692 1714 1692 1715 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.007	0.34	11.7	0.4	1	21	980	1000	980	1004	0.92
2	8	0.0009	0.044	14.5	4.0	1	23	1503	1526	1503	1526	0.97
3	8	2.2e-05	0.0011	19.5	3.4	2	23	1553	1574	1553	1574	0.97
4	8	0.0001	0.0049	17.5	2.3	1	23	1580	1602	1580	1602	0.99
5	8	4e-06	0.0002	21.9	0.7	1	23	1608	1630	1608	1630	0.99
6	8	0.028	1.4	9.8	2.2	1	23	1636	1658	1636	1658	0.96
7	8	0.0018	0.089	13.5	0.1	2	23	1665	1686	1664	1686	0.96
8	8	0.0064	0.31	11.8	3.6	1	23	1692	1714	1692	1715	0.96

Sequence Information

Coding Sequence: ATGAGTAGTGTTTTAAATCATAGTAATTACAATGACAAACAACAATTTGTTGTGGAAAATCAACAGCCACAATTGCCCGATCATTTGAAATGTGGCGAAGTGTATACTTGGCTATGTGCGGGAGAATCGTATGCAGTGGAATGTAAATTATGTGAAGATCATCCTTTATGTCCACTATCGGAATTTCCCCAGCATATGCAAGTGTGGCATACAGATTGGGAGCATACACACAACGATCATGATCATGATGATCATGAAGATCTTCAAGATTCAGAAGATGATGTTAACGAAGAAGATCATTATGAAGAACATAATGATGAGCATGCTTTATCATTTACCACCGAAGACAGTGGCTTATTTGAGCCAGACGATTTATTACATAGCGAAAGAGTATCTAACCAAGTTTTTCTATACAATGAAGAACTGTTAGAACCTTTTGAACAGGTATTAATAGAACACGACAATACCATAGATTCCATACAAATTAGCGGAGATGTTAATGAAGAAGAAGGTTTAGAAGAAGTAAACAAACAGGTAGCAGAGGCGGCAGAAGGTGTAACTGAGAAAGAGCATGAGAAAAACAATGACTTTAGCATAAACATGACCTCTAAAGACAGAAAAGGTAAACAAATAGCGGTCTCTAATGAACTAACAGATAATGAGAGAGAATTACCGTATTTACAAGAAATAACAGAGAGTCAAAGAGAAATAACAGAAACTGAAAATGTAAAGAAAAAATCAAAGAAAATTACGAAATCAACAACTAATTTACAGAATGCAAAAGAAATCAAAGAAAAAACAAGAGAATTAAAAGAAAATGAAACAAATGAAGAGGAAAATGAAACCAAAACTAAAAATATTGCAAGGAAAACAAATGAAACTAGTGAAATTGAAAGTGAGACAAGTGAAATTGAAAGTAAAATCGGTGAAAATGAAACAAAGGCTTTAAAATATTTGAAGAAAGCTACAAATAATTTGGATCCTGTTAAGAAAACCAGGAAATCCCTAAGAAATGATAAAGAAAATAAAGATAAAGGAGATTTAAAAGAAATGACAGCAAATGAAACAAAAAATAAAAATTATAAAAGAAATTCGAAAGAACCCAGAGATTCAAAGGAACTAAGAGAAAAAGAAACTGAAACAAGTGATAATGAAACAATAACAAGTGATGAAACAGAAATTAAACAAAATATAACAAATACCTTTAAATATGATGAAATCCCCGTTCAGATACCAAGTGCTAAACAAAATATAACAAACATTAGAAAATCTTCAAGAAATTTGAGAAAAAGAAATAGAGAAATTGAAACAACTTTTCAAGATGCTGTAAACAGCAAATTGGAAGAAGAGGAACCAGAGGAAATGAAGCAACAAGAATTAAATGAAAGTGAAACACCTTACCTGGAAAACCTCCAAACATTTGCCAGTACTCCAAGAAATAAGGCAACAACCACTTCTAAAACAAGAACAATCAGAAGGAGTCTAAGAAAATTGTCCAGAGAGTTCAGCGAAGAGGAATTGGAATCAAATATACACGAACACTTAGAAGATTCTCCAAAATCTTCACTTTCTTGCCCCAGAAATAGAAAATCTAAAAATAATTTAAGAGAGACAGCAAAAGATTTAAACGAAGATAAAGTGGAAGAAATCCTCGAAAAAGAATTAAATATTGAAGAGAATGTAATTGAAAACGAATTTGAGCAACAAAACTCTCCTAAAACTAGGCAATCAAAGAGAAAACCTAGATATTCCGGAAGTGAAGCTGAAAATCAAGAATTAAGCCCACTTAAATGCCCTTTGGTTCCCCTTGAAAAGTCTACAAGACTGAGTGTAAGATCAAGTAAAAGAAAAACTAGCTCCAGAACAAATATTCTACCATTAAATGCTAATCTTAAACCTCTTAAAAGAACCAGAAGAGAAAGTTCCTGTGAAACTTCGAATATTTTAGGAAAAAAAGAAGAGATCAGTAAAACTACAAAACAGACTTTAGTTACGCACTTTTTTGAGAATAAAAGTAATAAAACTAAAGCACCACATTCCGCAGATTTGGAAACTTTAATACAATCCTCAAGAATTTCACCAAATTTTGAGGAAAACTCTGTTAGCAATGCTTTAATGGAAGAAACAGATACTTGCTCTCTTAATTCTTATATTTCATCAAATCCTTCCTCTCCAGCCAAACTTTCCTCCCAAGGTTACTATTCTGGCGGCAAAGACAGCTGTTCACCCCTCCGCAGTGAACCCTTGTCTCCACTCTCCCCCAACACCGAAGAGGAACATTTTGAATTCTATGCAGCCAAAGAGAAACTAAACAAACATCATGTTAGCTATTTAATACAGTTGTACCAGCAGCATAGCCACCTATGGGATCAATCTCATGCCAATTTCTGTGAACCCCAAGAATGTCGGAAATCCTGGCAACAGATTACCGATCAATGGAACGAGTTTTGCAAACGTAAGTTCTCTACAGCCGAAATACGCATACGTTTGGTTACACTCTGTCAACGTTATGTCCAGGAGAGAGAACGTCTCGCATTGCAGGGAGAACTTGATGAATTTGCTAAATTCCCCTACTACGAACAAATGCAGTTCCTGGAGCAGCAAAAGTCTTTGCAACAGAGACGTGAGCAGCAAGAACAACAAAATGAAAAGATTTTGGAAGTTTATCAAAATTTCCCTTTACTGTGGCATATCAGCAATTATAAAGTGCGTCAGGCCAAGCAAAGGGCCGGGGCTTTCGAAAGCATTAGCAAGACTTTGAAATTGTCGGGTTTACACTTGTCCTCTATGGCTGTGCAAAAGCGCATACGTTCTCTAAGGAAATGTTATCGTTTGGAGAAAATACGCTTTTTGAATGCCCAAGTGGAGCAGACGCAATTTCAGCCTACATTTAGGCATTTTGAGAGAATGCAATTTCTGGATAAACATATAGATCCCTTCAGGTGTCGTATTTGTGGGAAAATATTTGAAAATTTTCAGGGTTTCCGGGAGCATTTGGAGGCGGAAAATCATGGCAATGTGCTGCAAGGAGATAATGAAAATGAGCTGAAAGTTGAGGAAAAAGTAACAGGAAGTTGTAACGAGACTATGGATACAGTTAATGGAGATGCATTGAAAATGTTAGCTCATGAAAAGCAAGACTCTGTTCAGGTTAATGAAGTACTAAACAAACCTATTGAAAATGTGACCGATTTTCAGAATCCTCCTACTATATTCATTAATAATATGGATTATTATAACGAAGCCGATAATAGTTCTGACATTTTGCAAACATTTACCCCCTTGGCCTGTACCCCCAACCCTGCCTTGGATCCTGTTACTAATTTCAACCTGCAGTCTTTAGAAAATCATAAAGTCATTATCCAGGAGGTGTTAATCTTTCCCTGCAATACCCCCGCTGAACCCATTATAGATTCTTTGCATATAGAAGATCAATTAATGGAGGAAATTATGGAAAATGTCACCAATGATGATAGTTTCAGCAAGCAATCTTTGGATCATTTCATTAACTCGGTCACTAATTGTGAGGAATTGGAAGGAAATAATATAATAAACGAGGAAATTTTTACTTCTGTTGATATGTCAACGGAAAATTCAATTATTTTGGCTCAACCAGATCAAACTTTGGATGCTCCAAATCCAGAAGCAAATGTTGAAGAAATTACACCTAAAATGGTAACACAGATAAAGGAAATTGAGCCACACTCCACAGAAAATCCCTCTTCAACTTCTCCCCAGCTGGCCAGCGTTCAATGTACCAACTTTTCTGAGGATCTTAAGTTAAATTCTGAACCCCTGGAAATCCCCAAGCCAGTCTGTAACGATTCGGATCCTGAATTTCACTCATCTGCTGATATCTCTACCATCCCTTTGCCCGATGAAGAAATCCACAAAATGATCGAACTATATCGTAAATATCCGCAAATCTGGAACCCCAATCATTTGGATTATAATTCACGGATTTTAAGGCGACAGGCCTGGTGTACCCTCACAAAGGAATTTAACTCTGTAGTGGGTAAACAATTCTCCTGGCGTACCTTGCATCGCAAGTTGACAGACTATGCCAAGTACTATAAGAAATTGATAACGGAACAGAAGGACTATGAGGAGCTGGAGAATAAATGGACATTTTATGAGGATTTCAAGTTTTTGGATGATGTGATTGCCGTCCATGACGAACTACAGCGCAGTGTCCATCATCGTGATAACAATTTCAAAATCATTAAGATCTACGAAACTCTACCCCAGCTGTGGGATATTAAGCATCCCGACTATAATAAACACTCCGTTAAACAGCGCAATATCGAACTAATGTGCAATCGTTTGCAAGAGGAAAACAATCTCCAACTAACCACGGAACGTTTAAAAAATCGCCTCATTGAGCTTAGAACCCAATATCGGGCAGCCAAAAGGCAACGCTTGAAATGTGAAAGAAATCAACAAACGTTTAAAACCGATTTTGTGTTCTATGAAGCCTTTAAATTTCTCGATCCCCACATAGATCCCTTTATATGTGAACAATGTCATAAAGAATTCAAAAAATTAACCGACTACAATCGTCATCTAAAGCGGGAACATAAAAAGAAAGCTGTAATAAAACTAGGTCCGTTTTCGGTATTACCTCTGGAGCCGGGTGTGGATATAGCATTGCAAAATGTTTGCCACATCTGCGGCATTAAGTTTACCAGCCGCAGCAATTTGGTTCATCATGTTAAGCGTCACGAGGGCATACGAAATTACGAATGTACCATGTGTCCGAAAAAGTTTTTCGCCTCGCACTCTCTCAAAGTGCACATAAGATCACACACAAAGGAGTGTCCCTATACATGTGAAAAATGCGGCATGTCTTTTGTTAGTGCCAGCAAATTGAATCAACATGTTAAGCGGCATTTGGATAAAAAAGATTTTCAGTGTGATTACTGTCCGAAGAGATTCTACTCGGGTTTTGAGAAGGATCGTCATGAGAGGAGACATTTAAATATCAGGGATAAGGTGTGTGATATTTGTGGTAAAACATTTGTGGCGGGCTCCTCGTACTACACGCACATGATGTTGCACAGTGATACGAAACGTTTTGAATGCGATAAATGTCAGATGAAATTTGCCCAATATGCCGGGTTGTATAAGCATAAAAAGAGACATCATCCGGCATAA
Protein Sequence: MSSVLNHSNYNDKQQFVVENQQPQLPDHLKCGEVYTWLCAGESYAVECKLCEDHPLCPLSEFPQHMQVWHTDWEHTHNDHDHDDHEDLQDSEDDVNEEDHYEEHNDEHALSFTTEDSGLFEPDDLLHSERVSNQVFLYNEELLEPFEQVLIEHDNTIDSIQISGDVNEEEGLEEVNKQVAEAAEGVTEKEHEKNNDFSINMTSKDRKGKQIAVSNELTDNERELPYLQEITESQREITETENVKKKSKKITKSTTNLQNAKEIKEKTRELKENETNEEENETKTKNIARKTNETSEIESETSEIESKIGENETKALKYLKKATNNLDPVKKTRKSLRNDKENKDKGDLKEMTANETKNKNYKRNSKEPRDSKELREKETETSDNETITSDETEIKQNITNTFKYDEIPVQIPSAKQNITNIRKSSRNLRKRNREIETTFQDAVNSKLEEEEPEEMKQQELNESETPYLENLQTFASTPRNKATTTSKTRTIRRSLRKLSREFSEEELESNIHEHLEDSPKSSLSCPRNRKSKNNLRETAKDLNEDKVEEILEKELNIEENVIENEFEQQNSPKTRQSKRKPRYSGSEAENQELSPLKCPLVPLEKSTRLSVRSSKRKTSSRTNILPLNANLKPLKRTRRESSCETSNILGKKEEISKTTKQTLVTHFFENKSNKTKAPHSADLETLIQSSRISPNFEENSVSNALMEETDTCSLNSYISSNPSSPAKLSSQGYYSGGKDSCSPLRSEPLSPLSPNTEEEHFEFYAAKEKLNKHHVSYLIQLYQQHSHLWDQSHANFCEPQECRKSWQQITDQWNEFCKRKFSTAEIRIRLVTLCQRYVQERERLALQGELDEFAKFPYYEQMQFLEQQKSLQQRREQQEQQNEKILEVYQNFPLLWHISNYKVRQAKQRAGAFESISKTLKLSGLHLSSMAVQKRIRSLRKCYRLEKIRFLNAQVEQTQFQPTFRHFERMQFLDKHIDPFRCRICGKIFENFQGFREHLEAENHGNVLQGDNENELKVEEKVTGSCNETMDTVNGDALKMLAHEKQDSVQVNEVLNKPIENVTDFQNPPTIFINNMDYYNEADNSSDILQTFTPLACTPNPALDPVTNFNLQSLENHKVIIQEVLIFPCNTPAEPIIDSLHIEDQLMEEIMENVTNDDSFSKQSLDHFINSVTNCEELEGNNIINEEIFTSVDMSTENSIILAQPDQTLDAPNPEANVEEITPKMVTQIKEIEPHSTENPSSTSPQLASVQCTNFSEDLKLNSEPLEIPKPVCNDSDPEFHSSADISTIPLPDEEIHKMIELYRKYPQIWNPNHLDYNSRILRRQAWCTLTKEFNSVVGKQFSWRTLHRKLTDYAKYYKKLITEQKDYEELENKWTFYEDFKFLDDVIAVHDELQRSVHHRDNNFKIIKIYETLPQLWDIKHPDYNKHSVKQRNIELMCNRLQEENNLQLTTERLKNRLIELRTQYRAAKRQRLKCERNQQTFKTDFVFYEAFKFLDPHIDPFICEQCHKEFKKLTDYNRHLKREHKKKAVIKLGPFSVLPLEPGVDIALQNVCHICGIKFTSRSNLVHHVKRHEGIRNYECTMCPKKFFASHSLKVHIRSHTKECPYTCEKCGMSFVSASKLNQHVKRHLDKKDFQCDYCPKRFYSGFEKDRHERRHLNIRDKVCDICGKTFVAGSSYYTHMMLHSDTKRFECDKCQMKFAQYAGLYKHKKRHHPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -