Cvom000727.1
Basic Information
- Insect
- Calliphora vomitoria
- Gene Symbol
- -
- Assembly
- GCA_942486075.2
- Location
- CALNXM020000013.1:595390-615136[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.13 6.2 7.7 0.7 1 23 1694 1717 1694 1717 0.91 2 11 9.1 4.5e+02 1.9 1.5 1 23 1880 1902 1880 1902 0.92 3 11 0.00092 0.045 14.4 2.8 2 23 1905 1926 1905 1926 0.97 4 11 4.4e-05 0.0022 18.6 0.2 3 23 1934 1954 1932 1954 0.98 5 11 9e-06 0.00044 20.8 5.8 2 23 1961 1982 1960 1982 0.97 6 11 0.044 2.2 9.1 0.1 2 23 2052 2072 2051 2072 0.96 7 11 0.00029 0.014 16.0 0.3 1 19 2078 2096 2078 2100 0.95 8 11 6.1e-06 0.0003 21.3 1.8 1 23 2108 2130 2108 2130 0.99 9 11 0.00022 0.011 16.4 6.5 1 23 2136 2158 2136 2159 0.96 10 11 0.0013 0.064 14.0 6.4 1 23 2164 2186 2164 2186 0.99 11 11 0.0033 0.16 12.7 6.0 1 23 2192 2214 2192 2215 0.96
Sequence Information
- Coding Sequence
- ATGACTGAGAATGTTCAGTGTCCAGTATGTACTCTATTCCTGCATGCAGGTATGAACCTTTCGGATCACTTGGAGACACATCCGAAAGAACAAGTGATTCGAGCCTTAGTACAAATGACCATATCTGGCACAGGAGTTGGGAGCAATAATACTTTGGCAGCTGTTTTAGCTGGTGAAAATGGCAACAAAAAACCAGTAGCTGAATTGGACGAGAAACCTTTGACGAACATAAAAGATAACGAGCTTAATATTGGCAGTACGGGCAATATTTCCAGCGCCAGCTCAAGCAATTCTGCCAGCAATTGTTCATTGTCAAACCAAAGTGTTAGTAGTAGTCAAAATTCTAATAACGTATTACATTTTTCCGGTACTAAAATTGAACATCATAATGAAAACGAGCTGGATAAAACGCAAATATCCCCATCACCCAAGCCGGTAAAAACGGTGGTTAAGTCGGAATCGAATACGGTGGCAATGGGAAAAGACAATGTGTCTGCGAATGAAAGTATGAATCAATGCTTTTCGAAGAAGAATTTCAATCAAACGAATTCATCCTCAAACTCTGCAACAAATCCAAATCATTCATATCATCCAAATACAGTAGAATTGACCAATACAAACAATGTTCATAATAGTTTTAATGTGTTTGGCGGGAATCCTCGCTATGAGCAGCATCACCGTAATGCTGTAAATAATCAAAATCAATTACTTACACCGCCGCATATGCCGCCACCACCACCTCCACCATCAGCGCAAAGTCAACATTCTGGTCAACATCAAGAAGCAGTCCGCGGAATTATACCAGCGGGATCTAATGGGACGTTTCATTCGATACAACAACAACAATTGACAGCTCCACCACCCCCACCGCAACATTCATCATCGCATTTAGGCAATACATCAAATAGTCAGCGTCAGGCTAACATGTTTGCAGCAGGTCAACATCAACCACCATCATCGAATTCTCATCATCAACAAAGTTTAAAGGTTATATATACGCCAAATTTGCCACCACCACCTCCGCTGCAGCTTTTCACTTATCAGCCGCAAACACATTTGCAACATCATCAGAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAACATAATCAGAATAAGCATCAAGTGACAGGGTCATTGCCAACGCAGCATCAAACATTGCAAACACATTCAGTTTTACAACAACAACAGCAGCAGCAACATCTTTTGCAGCAAACTTTGCAACACAATTTAAGGATTCAAGTACCACCGCAACCACAACCGATTCCAACAAAACATTCATATTCGCCAAAAAACAATGGTTTGCCAACTCAACATCACTCAACAACTTCTACAAGGAATAATCAACACCAACAACATCAGCAACTACCCAAAGCAGATATGTCACAACACCAGCAGCAGGAACAGCAACAATCACATGCTAACTCTGAAAATACACAAAATTCTAATAATCACATCTTCAATTCGAATGAAATTTTGAATAAATCAATAAAAGGAATATCGGCAACGACAGTGCAAAATACAAATTCCAATGTACCATCGTATCCACAAGTTTCAATAAGTCCATCTGCTGCTACAACATCAATGGCAGCTGTAGCTGCCTCAACATTAGGTAGACACACAAATTCACCATTTGCAGCGTTATTAGCTGCGGCTGCTGGTGCTCCATCGCCTTCTAATGCTTCGTCAGTTTTACGGTACGCTGAGTCGCCGGTTGCACATTATTTAGAACGGGAAAATGGTGATTTTATTGTACAAGAAACTCCCAAACATATTGTTGAATGTGTTGAAACAGACAATGGAGAGTTTTCTGTCATTGAACGTATATACCAATCACCACCCAGTGTTTTACATATTCATGACGATGATGATGATGATGACGACGACGATGACGATAACTGTGACGATCAGGCAGAAGATGAACAAAATGAATGTGTTGATAGTAAGTCTAAACAGCTTGAAATTAACCCCAGTGATAAAACTGAAGAAGAAATGGATGAAAAGCAAAGGACAACAAAATCGTCCTCTAATGACGATGAAAAGATATCTGTTGAAACGAAGGAATCTAAAAGGAAATCTAAACCTAAAGATGAGTCTTTGGAGGATAAAGAAATTGTTGATTTTGTTAGCATTTCGAGTGACAGCGGCGACGAAGAAGAATTCATATCTCAAGAACGAAAAGATTATAAAAGTACCACCGAAAATAATAAGATAATAAAGAATCAAACTTCCTCCACATCAACGCTCTCAATGTCTACAACGTCAGCGCTGTCCTTAACCACATCCTCATCTGTATCACCTTCATTAACAGCATCCAATGGTGGTGAAGACCAACAAATAAATTCTACACCATCCACTTCGTTACATTCTACTTCTTCTTCAGGCACGGCAAATACAAACCAAGCACAACTAAATTCCGGAGTCACCACCAATACCAGTAGTCGAAAGAAATCATCGAAAAACACAATCACAGTTTTAAGTGATGTTCAATTGAATTTAAATGAATACTTGGATTTGGTGGGTAATATAATTGCTTCGAGTAAAGTAGCAGCCCAGCGTAAAACATTTGCATCCATAGCTCCTATTCCTTTAGTTAAAATCGAAAAGGAAGAGCCTATGGATGAATACATAACAACAAACACAACAACATCAGCAACATCAACAACAACAACCAATTTTGAAACTCCACCACAACCACCAACACCTTTAAAGGCCAACAAACATGAGACTGAAGAAATAACTGATACCCCTAGCAGTAGTAATAGTAAACAAACAACAAATAATAGTAATCTAATTTTAACAAATGAACTAGAACACGATGAACAAGAAGAGAAAAAACCTCAGGTCATCGAAAGTGCTCCCGAAAATGAAACTGGAAATTCTAACGTCTTTTCAATTGCCTCATCTAGCCTAACGACTATAAATTCCAGTCACGTTACTAGTGTTATACGTATGGCCACAACTAGTCAACACCAATCCCAGCTGCAACAACAAATGCTGAATCCAGTAGAAAGCAATAAAAGCTCTATAGAAGCTGAAGATCTATCACAACCCCAACGTAATGTTCAATCTTTGACAAACTCCAAATCATTAGGCCAGACACCATTGACTCGCAAAGGTCCTAAAAAACTTGTTATTAAACCAAAATCTTCAAAGACAGAAGTTTTTCCACCAACCACAACCACTGAAAATAAACCAAACTCAAATCTAGTACATGACGATCAGGAAATGCCAACGACTTCTGCTAAGGCTAGGCAAGAATATACAAAACAAAGTTCTCTCGAAGAGGATGCGTTTAATGCAACAGATATAAAGGTTAAAAATGAACCCATCACGTCTATAACATATGAAAATCAACAGCAACATTCTCACTATCAACCAACTACGAGCTTCAGTATCTTGGAGCAACACCTCAATTCTAAAGAACCTATTCTCGAGTTTAAGGAAGAAAAACCATGCATAACAGAAGCTAGTGTGCCGCCAACATCGATCATAAAAGAAATGAAGGTAGAGAATAATGTTAACGATGATGCGCGTGTACTTTATGATTTTGCTAATTCGAAAAAATCTCAAAACGAAACACCGCCAATATTTCCATCTTCCACATCGCTTTTCGCAAGCAAACAAACTTCCATAGAATTGACATCAGTCGGAGAGGTTCAGCAGCAGCAACTAACTAAGGAAATGAATCATGAGCATGATACATCTTCTTCATCGTCATCAACATACTCATCACAATCAGCTATGGACGCAACAATGCCATCAGAAGAGCTGAATGAAAGTTCTGCTACAAATGCTTCTGCAGCAGTAACTGGGCAAATTCAACAACAACCGAATCAGGTGTACACTGATTTTCACTTCAGTTATCTGTATAATAGTAGTAATGCGACGGCGGTTACTTCTGCCGAACAACCTGACATAAAGCAACCACAGCAATTCCCAACATTTTATCAAAATTCCAGCAATAACAACAACAATACAACGTTGTTGGAAGATTCATCATCTAGTAAAAACTATACGGAATATCAGCAGCAACAACAGCATAATCATCATCCGGTACAGCATCAATCGGCTGTGACATCACACCATCAATGGTTTAATAATAGTAATAACTATCAAACGTCTGAACCTAACGTTACACCAATATCATCAAATCATTCAGTTTCCAACATGAACAATGCTTTAGATGGCAGTGAAGTTAGTAAATATTTGGATTTGGATTCGTGTAAACGAGAGCAAAATATTGATATAATTGTTGGCGATCGTGCAACTGTACCACCGCCACCACCACCATCTTCCTCTACGTCGTGTTCGTTTAATGGCGCAACTGACAACAGTATGGCTGGTATCTGTTCAACGGCAGCCACATTAAACATACGTACCGATGAGAAAATGCCTGCTAAAGGTGAAATTTCTGAACAGGAAAGCAATTGCGATATTGATAATTCGTGGAGTCAACCGATGTATGGCGATATATCGGCACGCTTTTTCAAGACAACATTTCCCGGCATCTTTCCACAAGACAACGGCTGGAATCATGAGGAATATTTTACTGTTCAGGATTTGAGTGCCTCCACAACTGCACAAGCTACTACTAGTGCCAGCAACAGACTGAAGAGCTTTGAGCCGACCAATAGCAGCAATAACAACAGCAATGTAATGCCAATATTTTCTCAAAATTCCAATGACAATTGTAATATTGATGTAATGCCATCAACATCGGCTAAAATCCGCAAGAGACGTAAACGTAGTTCTCAAGATGGAAAAACGTCACAAGCAAATGGCAAGCGTATGCAGCCAACATCGACAGTAACCTCACAACAAATGATGATGCAACATCAAACTGAGATACCGGGAGTTGAGTTTAATTTTCAACATCAGCATCAGTTACAGCAACAAAGTTTGCAACAACCCAGTACGTCGACAGCATTTTTGGCAGGACCATCAAATGCTAGTACTGCCTTAACATCTGGCTTTATGATGCAACAGCAACAGCTGCACCCGCAACAACAGCAAGCTCAGCCTCAACAACACCAAACCCAACAGAAACAACGCACAAAAGTTTATGAATGCGGCCATTGCAATGCAAAATATTCCAAACTTAAAGATCGTAATGCTCACATGGTTGATGTTCACAATTATATACGCCAAAATCGAAGATTAGTATGTCCCGCAACTGGCCTTGCCACGCCCCTGACGAATTCAGATATGCAAGATGTTGCTCTACCCACAACAAGTGCAGCTGGTAGCATATTGGTGACTGCTTTACAAACTGCTGACTGTGTAGGCGATTACAAACAGAGTATAGTAAAAATAGAAAATGAAAATATTCAACGGGATCTAACGGGCGTAGAACCAATCAATGCCAATATAAGTGCTAAAACTGAAATAATTGAAGACGACAAACTAAATTTAGCCCTAGTACCCATGAACGCAGCAAATGGTGATCCAAACCTTGAATACGATACAAAACCACCAACCAATAGTTTGCCATTGTCGCTGACAACTCCCACCAGTAAATTAACAACACTCTATCGCATGTTGGTATCGTTTAATATGACAACTTTAAAACAAAACCAAAGCCTTTCCGAATTCGATGAGAATCTTATAAAATCCTCGATATTCTTTTGTTACATCTGTCGCCAGAATTTCAATTCAGTCAAATTCTACGACGCCCATTTGACCGAACATCCTGCTGAATGTTTTACTTGCGGCAAAAAATTCCAGCGGTGGAAAAATTTCTCGTTACATTTAAAACGTCATTTGGGATGGAAGGAATTCGGTTGTACGGTGTGCGATAAAAAATTTGTGGTACGCAGTGCTCTCGTTGAGCATATGCGTATGCATTCTGGACTCTCGCCGTTGAAATGCAAAGTTTGTGGAAAACACTTTAAACGCTATTCAAACTTAACGCAACATCGCAAACGACATTCTAAACAAATCGTTCGTAGGAAAGAGTACGTTTGTTATTGTGGCGAAGTCCTACCATCCAAAGCACGCTTCTTATGGCATAAAGAAACGCATGATTCGAAACCGAAATGCTGCCCCCATTGTTGTGATCGTTTCGTACATGTCAACTCTTTGCGACGTCACATACGTCTAGCGCATTCAGATAAATTCGATTACACTGAGCCGATGGAGTGTCCCATCTGCAAGCAAATATTTGCCAAAGCCTCTATGAAAGCTCACATGGCAACGCATTCCACAGAAACGCAATATGATTGTGCTATTTGCAGCAAGTCCTTCTCAACAAAATGGAATTTGAAAATTCATTCTTGGGTACATGCAAATCGCACATCCAAACCCTTCAAGTGTGAACACTGCCCCAAGGCATTTGTGCGCGAGGTAGATTTCAAGAATCACATGAATTCCCATAAACAAATCAAACCATACACCTGCGAAGTGTGTGGCTGTAAGTTTATACGCAAATACAATTACATGCGCCATAGAAGGGAGCATCACGGCAATAAAAAGTACACCTGTGATTTATGTAAAAAGTCGTTCCATCGCCACTACTATCTCATCGAGCATAGACGCATACATACCGGCGAACGACCTTTTCAATGCACGATTTGTGGTAAAAGTTCAACTACCAAAACTAATCATAACAAACACCTAAAGATCCATCATTCACGAGATCCATTTACGGTAGAAGTATAA
- Protein Sequence
- MTENVQCPVCTLFLHAGMNLSDHLETHPKEQVIRALVQMTISGTGVGSNNTLAAVLAGENGNKKPVAELDEKPLTNIKDNELNIGSTGNISSASSSNSASNCSLSNQSVSSSQNSNNVLHFSGTKIEHHNENELDKTQISPSPKPVKTVVKSESNTVAMGKDNVSANESMNQCFSKKNFNQTNSSSNSATNPNHSYHPNTVELTNTNNVHNSFNVFGGNPRYEQHHRNAVNNQNQLLTPPHMPPPPPPPSAQSQHSGQHQEAVRGIIPAGSNGTFHSIQQQQLTAPPPPPQHSSSHLGNTSNSQRQANMFAAGQHQPPSSNSHHQQSLKVIYTPNLPPPPPLQLFTYQPQTHLQHHQKPPPAYGTAISQIRSQHNQNKHQVTGSLPTQHQTLQTHSVLQQQQQQQHLLQQTLQHNLRIQVPPQPQPIPTKHSYSPKNNGLPTQHHSTTSTRNNQHQQHQQLPKADMSQHQQQEQQQSHANSENTQNSNNHIFNSNEILNKSIKGISATTVQNTNSNVPSYPQVSISPSAATTSMAAVAASTLGRHTNSPFAALLAAAAGAPSPSNASSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDDDDDDDDDDDNCDDQAEDEQNECVDSKSKQLEINPSDKTEEEMDEKQRTTKSSSNDDEKISVETKESKRKSKPKDESLEDKEIVDFVSISSDSGDEEEFISQERKDYKSTTENNKIIKNQTSSTSTLSMSTTSALSLTTSSSVSPSLTASNGGEDQQINSTPSTSLHSTSSSGTANTNQAQLNSGVTTNTSSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRKTFASIAPIPLVKIEKEEPMDEYITTNTTTSATSTTTTNFETPPQPPTPLKANKHETEEITDTPSSSNSKQTTNNSNLILTNELEHDEQEEKKPQVIESAPENETGNSNVFSIASSSLTTINSSHVTSVIRMATTSQHQSQLQQQMLNPVESNKSSIEAEDLSQPQRNVQSLTNSKSLGQTPLTRKGPKKLVIKPKSSKTEVFPPTTTTENKPNSNLVHDDQEMPTTSAKARQEYTKQSSLEEDAFNATDIKVKNEPITSITYENQQQHSHYQPTTSFSILEQHLNSKEPILEFKEEKPCITEASVPPTSIIKEMKVENNVNDDARVLYDFANSKKSQNETPPIFPSSTSLFASKQTSIELTSVGEVQQQQLTKEMNHEHDTSSSSSSTYSSQSAMDATMPSEELNESSATNASAAVTGQIQQQPNQVYTDFHFSYLYNSSNATAVTSAEQPDIKQPQQFPTFYQNSSNNNNNTTLLEDSSSSKNYTEYQQQQQHNHHPVQHQSAVTSHHQWFNNSNNYQTSEPNVTPISSNHSVSNMNNALDGSEVSKYLDLDSCKREQNIDIIVGDRATVPPPPPPSSSTSCSFNGATDNSMAGICSTAATLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNHEEYFTVQDLSASTTAQATTSASNRLKSFEPTNSSNNNSNVMPIFSQNSNDNCNIDVMPSTSAKIRKRRKRSSQDGKTSQANGKRMQPTSTVTSQQMMMQHQTEIPGVEFNFQHQHQLQQQSLQQPSTSTAFLAGPSNASTALTSGFMMQQQQLHPQQQQAQPQQHQTQQKQRTKVYECGHCNAKYSKLKDRNAHMVDVHNYIRQNRRLVCPATGLATPLTNSDMQDVALPTTSAAGSILVTALQTADCVGDYKQSIVKIENENIQRDLTGVEPINANISAKTEIIEDDKLNLALVPMNAANGDPNLEYDTKPPTNSLPLSLTTPTSKLTTLYRMLVSFNMTTLKQNQSLSEFDENLIKSSIFFCYICRQNFNSVKFYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHSKQIVRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCAICSKSFSTKWNLKIHSWVHANRTSKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922372;
- 90% Identity
- -
- 80% Identity
- -