Basic Information

Insect: Calliphora vomitoria
Gene Symbol: -
Assembly: GCA_942486075.2
Location: CALNXM020000111.1:1261284-1267429[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0035 0.17 12.6 2.5 2 19 537 554 536 556 0.95

2 16 0.021 1 10.2 0.7 2 23 598 620 597 620 0.94

3 16 1.5 74 4.3 0.5 5 23 630 648 627 648 0.92

4 16 1.4e-05 0.00068 20.2 1.1 1 23 655 678 655 678 0.95

5 16 4.4e-05 0.0021 18.6 3.1 2 23 685 706 684 706 0.97

6 16 1.2 57 4.7 0.0 1 20 715 734 715 736 0.92

7 16 0.23 11 6.9 4.3 1 22 756 777 756 780 0.91

8 16 0.058 2.8 8.8 4.7 1 23 785 807 785 807 0.96

9 16 0.47 23 5.9 0.2 1 23 823 848 823 848 0.96

10 16 0.048 2.4 9.0 2.4 1 23 861 884 861 884 0.96

11 16 0.0013 0.064 13.9 2.7 2 23 890 912 889 912 0.95

12 16 0.00037 0.018 15.7 1.4 2 23 916 938 915 938 0.92

13 16 0.017 0.85 10.4 3.4 1 23 944 967 944 967 0.96

14 16 0.0013 0.062 14.0 0.2 1 23 972 994 972 994 0.98

15 16 1e-06 4.9e-05 23.8 1.8 1 23 1000 1022 1000 1022 0.99

16 16 0.029 1.4 9.7 0.3 1 23 1028 1057 1028 1057 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0035	0.17	12.6	2.5	2	19	537	554	536	556	0.95
2	16	0.021	1	10.2	0.7	2	23	598	620	597	620	0.94
3	16	1.5	74	4.3	0.5	5	23	630	648	627	648	0.92
4	16	1.4e-05	0.00068	20.2	1.1	1	23	655	678	655	678	0.95
5	16	4.4e-05	0.0021	18.6	3.1	2	23	685	706	684	706	0.97
6	16	1.2	57	4.7	0.0	1	20	715	734	715	736	0.92
7	16	0.23	11	6.9	4.3	1	22	756	777	756	780	0.91
8	16	0.058	2.8	8.8	4.7	1	23	785	807	785	807	0.96
9	16	0.47	23	5.9	0.2	1	23	823	848	823	848	0.96
10	16	0.048	2.4	9.0	2.4	1	23	861	884	861	884	0.96
11	16	0.0013	0.064	13.9	2.7	2	23	890	912	889	912	0.95
12	16	0.00037	0.018	15.7	1.4	2	23	916	938	915	938	0.92
13	16	0.017	0.85	10.4	3.4	1	23	944	967	944	967	0.96
14	16	0.0013	0.062	14.0	0.2	1	23	972	994	972	994	0.98
15	16	1e-06	4.9e-05	23.8	1.8	1	23	1000	1022	1000	1022	0.99
16	16	0.029	1.4	9.7	0.3	1	23	1028	1057	1028	1057	0.87

Sequence Information

Coding Sequence: ATGGCGGTTAATGTTTCCACATCTGCCAGTGTCTGTTTATATTGCAAAACAACGTCGGAGAGAGAGGCTGAAAAGGAATTTCATGAAATCTTCGATGAAGTGGGAGTGGAATTACAATTGCCCACATTGGTTGAAAAGTTTTTCCACATTAAAGTAGAAAATAAAAACAAGCATACTCTATGTGATGATTGTGTTAACCGTTTAATAGAATTATATGATTTGGAAGAACACGCCAAAGAGGAAAAAGACAAGGTAGATGATTTTACGGAATTGCAAAGTCCCGTAGTCTCGATTATTGAGCCGGAAAGTGTAAATGAAGAAAAAAGTAAAAAAGTCTCAAAACATATTTATGAGAAATTTACTAAGGAGGTTGTAGGTGACCAAAATAATTTAAAATGTACAAATAATCAGCAGCAAGATGAACCAGAAATATTTTTACAAAATAGAATTGGTATTCAACATGCAGGTCTTGAAATTGTTGCTCAACCTATTGATGCAGCTAATGTTGAAGAAAATGAATTTACAGATGTAGAAGCTCTTATTAGTAAAGATAAATCTGCTATATTTACTAGCCAAGATATTCAAACTAACAATACTAATGCTGAACATTTTACCCCAGAAAATTTTGAAATCGGTTTGGACCAATGCTATAATAATGTTATATGTAACAGTCCTGTAAGTGTAACAAACGCAAGCGAACAGGATTCCACTGAAGATATTGTATTTGTAGAAGATCAAGGAGACCATAATTCAGACATAGAAAATGATGATAACTCTAATAAAACTGACATTCAAATTTTCCCAGAAGAACTTGAAGTAATAAATGAGAGTCAAATGCATGCAATTATAGAAGATGAACAAGTATCTGAAGTAAAAAATGAAACATTTGAGAATAATTGTATATATATTGAACAAAATAATATTATCGAAGAACATGTCTATGAAGATGAAGTAGAAAATGAAGCTTTATCGGATTTTAGTACAAATAACTCTCAAAACGAAGACATACAACTTGAAGAACATGAACTTGTATATTATGAGGAAGATATGTCATGTGACAATGAAAAAGAATCCCTAAATGAAATATTGGATGAGTTAGATAATGATAATATAGAATTGAATTCATTACATGTAGAAACAGAAAATTCGGTAGACATAGAAACTGAATCATTAAATTCTAATGATACTGGAAACAAAATAATTTATAGAGACGATATTGATGTTGCTAACATTATTGAAAATGATGAGGATGATGTGGATGATCCCCAGGACGATACATATTCAATAGAAGAGGAATATTTAATGGAAGAAATATCTTGCTCTCAGGAATTTGATTGTGTTGATATTAATGAGTATTTGGAAAAGGTTATAGTAACAAAATTTCAAGATTTACAATTGGATTGGGAAGTGGAATGTAAATTGTGCCATGACAAATACAATACATTTCAAGAAGTATTAAATCATGACTGTATAACACAATTCGAAGAGGAACAACAGTTTAGCTGCATTATTAAAGATTGTGACGAAACTATAAACAATTTGCAGATTTTATCAAGACATTTAATACTACAACATTATGATAAATTGGAGAGCATCCCCATTTATGGCAAATGTCCAGATTGTCAGAAAACATTTTCGAATTTTATAGATTTTAATAAACACTCTTGTTGCCGTACTATAAAGAGAAAAACCGGATCACCTAATTATTGTCAATCCTGTGATTTGGACTTTCAGTCTTTAAAGAGATTTGTATTTCATATGCAATTTCATTTAACAAACCATCGGCCAAAGGTTTGTTTATTATGTGGCAAATTATTTAATAATTCCAATGATTTCTTTGAACATACTCAATATGAACATAATCCAAATGCTGATATGGCTTGCATAAAATGTGATCGCTTCTTTAAGGAAAAAGATGTCTTTGACAGTCATATGGATTTACACGAAGATTTAAAATATCAATTTGCCTGTAAATATTGTCCCAAAAAGTATACTAGTAAATACGGTTTAAATCAACACATGGATGTTTATCATAATAAATCCAAGGCCTTAAAATGCGATCATTGTGAAAAAGAATTTGTAAATAACTCATCATATCGTAATCACTTGAAATCTCATGCCGCTGATGTCCAAGTAGAAACCTTTATTTGTGCTACATGTGGTTTAATAACTAGTAATTTGGAATTGATTAAGAAGCATACTGAATCAAATGAAGAATCGCCTTGTTATTCTTCCCAAATAGAAGAGAAAATATTGGGTTTGGGTTATACATGCGAAAACTGTTCACTAGATTTTCATACAATTAAACATCTTAAACAACATCGTTTAAGTGATAAACATAGTGATGATTTATTTCATTGCGGTGTGTGTCGTCGTGCCTTCAAGACACTACGTCATATGCGTAACCATTCTATAAGTCATAAAGATTTCGAAAAATGGCAGCAATCATTTCCAATAACACGTTATTTTGTGTGCAATGTAGGCGATTGTCAAGAGTTCTATCCAATTTGGACTTCATTATATTACCACAAAAAACGTCCTCATAAAACTAAGGACAATCCGGATACGGCTCCTTCCGATTTTAAATGCCAATTTTGCCAACAACAATGCTCTTCGAAAATGTCATTGGCCGTCCACGTAGCTAGGAGTCATAATAATTCCAATATTAGTTGTTCTCACTGCAAACAAACATATAAATCTCAAAAGTTGTTACAAGACCACATTGATAAATACCATGTATCCATAAAATGTAACATTTGTTTTAAATCCTTTAAAAATCGACGAAACCTTGATTCACACAGTAATTTGGTACACCTTAATGTAAAGCGGTATTTTTGTCGATACTGCAATAAGGGCTATTTCCACAAAAGTGAAATGGAAATACACGAAAAGAAAGTTCATCCTGAATTTGCATATAAATGTGAAATTTGCGATTTTATAACTAATTATGCACAATCTTTAGAGATTCATATGGACAAACATAATAATAAGCAGAAATTCAAATGTACAATTTGTAATAAGGCATTCGGACGGAAACAACTATTAAAAGTACATATGAAAAGGCATCAAAACAAAAAAGATTACGTTTGCAACAAATATTTAACTGAAAACGGCTGTGACGCTGCATTCTTTACTTACAATCTATTGAAAATCCATATTCAAACTAAACATAAAAAAGACAGCAACAACAAGCGACAAATATTGTTATCCAAAAAATATGTTGTAGAAATTGAAGATAAATCTTATGAAATATTTGATATTGATGAAGACAGTAGTACACAAGCAAAACGCCCTAGAGCCACTTCGGTAATGCGCATAAACAATGATGAATTTGAACAAGATGCTTTAGAGCTGGCATTGGAAAAGGAGCTGGAATCGCAAGAGTTAAAAAGTGAAAATGAATATGAAACAATGTGTGATTGA
Protein Sequence: MAVNVSTSASVCLYCKTTSEREAEKEFHEIFDEVGVELQLPTLVEKFFHIKVENKNKHTLCDDCVNRLIELYDLEEHAKEEKDKVDDFTELQSPVVSIIEPESVNEEKSKKVSKHIYEKFTKEVVGDQNNLKCTNNQQQDEPEIFLQNRIGIQHAGLEIVAQPIDAANVEENEFTDVEALISKDKSAIFTSQDIQTNNTNAEHFTPENFEIGLDQCYNNVICNSPVSVTNASEQDSTEDIVFVEDQGDHNSDIENDDNSNKTDIQIFPEELEVINESQMHAIIEDEQVSEVKNETFENNCIYIEQNNIIEEHVYEDEVENEALSDFSTNNSQNEDIQLEEHELVYYEEDMSCDNEKESLNEILDELDNDNIELNSLHVETENSVDIETESLNSNDTGNKIIYRDDIDVANIIENDEDDVDDPQDDTYSIEEEYLMEEISCSQEFDCVDINEYLEKVIVTKFQDLQLDWEVECKLCHDKYNTFQEVLNHDCITQFEEEQQFSCIIKDCDETINNLQILSRHLILQHYDKLESIPIYGKCPDCQKTFSNFIDFNKHSCCRTIKRKTGSPNYCQSCDLDFQSLKRFVFHMQFHLTNHRPKVCLLCGKLFNNSNDFFEHTQYEHNPNADMACIKCDRFFKEKDVFDSHMDLHEDLKYQFACKYCPKKYTSKYGLNQHMDVYHNKSKALKCDHCEKEFVNNSSYRNHLKSHAADVQVETFICATCGLITSNLELIKKHTESNEESPCYSSQIEEKILGLGYTCENCSLDFHTIKHLKQHRLSDKHSDDLFHCGVCRRAFKTLRHMRNHSISHKDFEKWQQSFPITRYFVCNVGDCQEFYPIWTSLYYHKKRPHKTKDNPDTAPSDFKCQFCQQQCSSKMSLAVHVARSHNNSNISCSHCKQTYKSQKLLQDHIDKYHVSIKCNICFKSFKNRRNLDSHSNLVHLNVKRYFCRYCNKGYFHKSEMEIHEKKVHPEFAYKCEICDFITNYAQSLEIHMDKHNNKQKFKCTICNKAFGRKQLLKVHMKRHQNKKDYVCNKYLTENGCDAAFFTYNLLKIHIQTKHKKDSNNKRQILLSKKYVVEIEDKSYEIFDIDEDSSTQAKRPRATSVMRINNDEFEQDALELALEKELESQELKSENEYETMCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259191;
90% Identity: -
80% Identity: -