Basic Information

Insect: Calliphora vomitoria
Gene Symbol: -
Assembly: GCA_942486075.2
Location: CALNXM020000742.1:11738-15567[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00085 0.042 14.5 2.3 1 23 448 470 448 470 0.96

2 10 1.7 84 4.1 5.2 1 23 476 498 476 498 0.98

3 10 2.3e-05 0.0011 19.5 2.6 1 23 504 526 504 526 0.98

4 10 0.00092 0.045 14.4 2.1 1 23 531 553 531 553 0.98

5 10 5e-07 2.5e-05 24.7 2.0 1 23 559 581 559 581 0.98

6 10 0.0047 0.23 12.2 1.2 2 23 587 609 586 609 0.93

7 10 1.1 55 4.7 0.7 1 23 623 645 623 645 0.90

8 10 0.0002 0.01 16.5 3.5 1 23 655 677 655 677 0.98

9 10 2.8e-05 0.0014 19.2 0.3 2 23 684 705 683 705 0.96

10 10 0.0039 0.19 12.5 2.6 1 23 710 733 710 733 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00085	0.042	14.5	2.3	1	23	448	470	448	470	0.96
2	10	1.7	84	4.1	5.2	1	23	476	498	476	498	0.98
3	10	2.3e-05	0.0011	19.5	2.6	1	23	504	526	504	526	0.98
4	10	0.00092	0.045	14.4	2.1	1	23	531	553	531	553	0.98
5	10	5e-07	2.5e-05	24.7	2.0	1	23	559	581	559	581	0.98
6	10	0.0047	0.23	12.2	1.2	2	23	587	609	586	609	0.93
7	10	1.1	55	4.7	0.7	1	23	623	645	623	645	0.90
8	10	0.0002	0.01	16.5	3.5	1	23	655	677	655	677	0.98
9	10	2.8e-05	0.0014	19.2	0.3	2	23	684	705	683	705	0.96
10	10	0.0039	0.19	12.5	2.6	1	23	710	733	710	733	0.96

Sequence Information

Coding Sequence: ATGGATTTAAAGTCCATAAAAGGATCCATATCCTTTGATAAATTTCAAAAATGTGGTGAAGTTTATAGATCTCCAATAATAAGTGAAAAACAATACAGGTTTCTATCATGTATTTATTGTAAAGATATTTCTTGGGAGCTGGACACATTCTTGCAACATCTGGATAATGCTCATCATCCAATAGATGATATATGTTCAAATCTATATAAAGAAGAGGATCCCATCGAAGAAAATGTAGCAAACAATGAAAATGTCACTGAATCAAAAATGGTGCAGAGTTCATCAAAGCCGATTGCAGAACCTAGGAATAATGAAAATGACCCTTTGGATGAAACCCGTTGCGATTATAGTGATTTCCTACCGGTGACTATCAAAGAGGAAGCATCTGAATCGATTGAGAACAATGATGTTAATTTAAACCGGGATAGCAATAGTAATAGCAATGCTAGTCATAACAATGAAATTTTGGAAATATACCAATTCGAATATGATGACAATAGTAGTGATGAAGATTATGAGCCAGATAAGGTCACCACTGACGATGAAAATTATGAAAATGCTGGTGAATATCTTAATGAGGAATATGATAAAGATGATGAGGATAATAATGATGATGATGAAGGCGATGACGATATTGAATTATTTGACATGAAATTTGAAAATAAGAAAACAAATCTTAAACGTTTTACCAAAAATCGTGAATTTATTAAAGCAGTTATAAATGCATATGAAAAGCAAAATATACTATGGGACATTGCTCATAAAAACAAAAAAAGAAGTTCACCAGAAAAGCAAACAGCACTTAAAATTATATTAAAAGAAATTAATGAAAAATTTGATATCAGTGCAACTTTGCAACAAATAGAGCGTATAATAAAACGTCTTAAGTTGAGATTTATACATCATTCACGATTAAGAGATAAAGGAGAATCCTATAAACCTTTATGGTTCTATGATTTATTAACATTTTTAGAACCACATTTAAAGGAAAATAAATTGCGAAGTGGTATTTATAAACAATTAAATGATAAACAATTCCTTTCATTGCTCAAACTATTAAAGGAAAATGAATGTTTTTGGAATGAAAACAATATTTATCATACTTCGGTAATAAATAAGCAAGACATTTTAAAATCTATGACCAATGATTTTTCTAAAATGTGTGAATATAAAGAATTTAATGCTGATATTATGCAAAATACAATAGACGAAATAATCGAAATGGCTAGAGAAGAGAATGCAAATAAGATGAGTCATATTGCCAGTAATAAGAATGTGGAATATCAGTCCAGCAATAAATTCTATAAAGACATACAATTTCTGTTGCCACACGTTGGTCCTTTTAAATGCAATTATTGCCCAAAAACTTTTACTGACATATACGCCTACAAATTTCATATATCAAGACATGAAGGCACCAAACCCTTCCAATGTATGCTATGCCCACGCGAATTAACACACAAAAAAGAATTTGTGTGTCATTTAAGGCGACATACGAAGGAGTGTCCTTTTCAGTGCGAGAAATGTGACAAATCATTTCCCAGCAAAAAGGAATGGCATCGACATGTTATAAAACATGGCTCCAAACCGTATGTCTGTGAACTGTGTGCCGATAGTTTTTATACCCAACATCAGTTAACCAATCACATGAAAAATCACAACAATATACGGGATCATGTTTGTCCTGAATGCGGCAAAGGCTTCACACATCGTGGCTTGCTAAGACAACATTTGCAGACTCATAATAAAACTAAATGTGTATGCTCACTATGCGATAATATATATTCAAATCCACGCAGTTTGCGCAAACATTATGTTAGAGTGCACGAGTCAGGACAGGAACCTTCAACCGCATCTATGGCTCAGTATAATTGTCAAATATGTAAAATAACATTTCTTTCTATACAAGATGCCAAGCAGCATCGCAAAGAGCACAAACAAAGTAATCCTGCAGAACGTAAACATGTTTGTGATATATGTGGTCATCATTTTGCTTATCCCAGAAATTTGGCTGATCACAAAAAGACCCATTCAAATATACGTGACCAAGTATGTGATGTGTGTGGAAAGGCTTTTACAAATACCAACCTATTGAATCAACACAAAAATGTTCACACAGGTGAGAAATTTGTGTGTAAGGCGTGCGGAAAAGATTATGCCCACTATCGGGGACTATGCCGACATATTACAAAAGCACACGGTACTAACATAAGAGATTTGGACGCTTTATTGGAAAAGCAAAAATTGGCGCCAACACCACAGTAA
Protein Sequence: MDLKSIKGSISFDKFQKCGEVYRSPIISEKQYRFLSCIYCKDISWELDTFLQHLDNAHHPIDDICSNLYKEEDPIEENVANNENVTESKMVQSSSKPIAEPRNNENDPLDETRCDYSDFLPVTIKEEASESIENNDVNLNRDSNSNSNASHNNEILEIYQFEYDDNSSDEDYEPDKVTTDDENYENAGEYLNEEYDKDDEDNNDDDEGDDDIELFDMKFENKKTNLKRFTKNREFIKAVINAYEKQNILWDIAHKNKKRSSPEKQTALKIILKEINEKFDISATLQQIERIIKRLKLRFIHHSRLRDKGESYKPLWFYDLLTFLEPHLKENKLRSGIYKQLNDKQFLSLLKLLKENECFWNENNIYHTSVINKQDILKSMTNDFSKMCEYKEFNADIMQNTIDEIIEMAREENANKMSHIASNKNVEYQSSNKFYKDIQFLLPHVGPFKCNYCPKTFTDIYAYKFHISRHEGTKPFQCMLCPRELTHKKEFVCHLRRHTKECPFQCEKCDKSFPSKKEWHRHVIKHGSKPYVCELCADSFYTQHQLTNHMKNHNNIRDHVCPECGKGFTHRGLLRQHLQTHNKTKCVCSLCDNIYSNPRSLRKHYVRVHESGQEPSTASMAQYNCQICKITFLSIQDAKQHRKEHKQSNPAERKHVCDICGHHFAYPRNLADHKKTHSNIRDQVCDVCGKAFTNTNLLNQHKNVHTGEKFVCKACGKDYAHYRGLCRHITKAHGTNIRDLDALLEKQKLAPTPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259185;
90% Identity: iTF_00045586;
80% Identity: -