Basic Information

Insect: Calliphora vomitoria
Gene Symbol: -
Assembly: GCA_942486075.2
Location: CALNXM020000107.1:649485-659308[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 8.4 4.1e+02 2.0 2.2 1 23 45 68 45 68 0.92

2 24 0.13 6.2 7.7 3.7 1 23 205 227 205 227 0.98

3 24 0.0026 0.13 13.0 0.1 1 23 260 282 260 282 0.98

4 24 0.00061 0.03 15.0 4.8 1 23 288 310 288 310 0.97

5 24 0.00019 0.0094 16.6 0.4 1 23 467 489 467 489 0.98

6 24 0.0015 0.075 13.7 4.1 3 23 499 520 498 520 0.94

7 24 0.0012 0.06 14.1 1.4 1 23 524 546 524 546 0.98

8 24 0.062 3 8.7 3.8 1 23 657 680 657 680 0.95

9 24 0.0053 0.26 12.0 1.0 2 23 691 712 690 712 0.97

10 24 0.57 28 5.6 0.7 1 23 745 767 745 767 0.96

11 24 0.00088 0.043 14.5 7.3 1 23 773 795 773 795 0.98

12 24 3.8 1.8e+02 3.1 0.7 1 12 798 809 798 812 0.90

13 24 0.003 0.15 12.8 4.2 1 23 949 972 949 972 0.97

14 24 0.01 0.49 11.2 2.3 1 23 982 1004 982 1004 0.97

15 24 0.4 20 6.1 1.6 1 23 1011 1033 1011 1033 0.96

16 24 0.00091 0.045 14.4 0.3 1 23 1039 1061 1039 1061 0.98

17 24 0.05 2.5 9.0 4.3 3 23 1069 1089 1067 1089 0.98

18 24 0.0068 0.33 11.7 0.7 2 23 1276 1298 1275 1298 0.96

19 24 0.82 40 5.2 2.1 2 23 1305 1326 1304 1326 0.95

20 24 0.0045 0.22 12.3 0.3 1 23 1359 1381 1359 1381 0.98

21 24 0.0013 0.064 13.9 2.5 1 23 1387 1409 1387 1409 0.97

22 24 0.00045 0.022 15.4 3.2 1 23 1583 1605 1583 1605 0.98

23 24 0.0018 0.087 13.5 0.2 1 23 1639 1661 1639 1661 0.98

24 24 0.00075 0.037 14.7 1.2 1 23 1667 1689 1667 1689 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	8.4	4.1e+02	2.0	2.2	1	23	45	68	45	68	0.92
2	24	0.13	6.2	7.7	3.7	1	23	205	227	205	227	0.98
3	24	0.0026	0.13	13.0	0.1	1	23	260	282	260	282	0.98
4	24	0.00061	0.03	15.0	4.8	1	23	288	310	288	310	0.97
5	24	0.00019	0.0094	16.6	0.4	1	23	467	489	467	489	0.98
6	24	0.0015	0.075	13.7	4.1	3	23	499	520	498	520	0.94
7	24	0.0012	0.06	14.1	1.4	1	23	524	546	524	546	0.98
8	24	0.062	3	8.7	3.8	1	23	657	680	657	680	0.95
9	24	0.0053	0.26	12.0	1.0	2	23	691	712	690	712	0.97
10	24	0.57	28	5.6	0.7	1	23	745	767	745	767	0.96
11	24	0.00088	0.043	14.5	7.3	1	23	773	795	773	795	0.98
12	24	3.8	1.8e+02	3.1	0.7	1	12	798	809	798	812	0.90
13	24	0.003	0.15	12.8	4.2	1	23	949	972	949	972	0.97
14	24	0.01	0.49	11.2	2.3	1	23	982	1004	982	1004	0.97
15	24	0.4	20	6.1	1.6	1	23	1011	1033	1011	1033	0.96
16	24	0.00091	0.045	14.4	0.3	1	23	1039	1061	1039	1061	0.98
17	24	0.05	2.5	9.0	4.3	3	23	1069	1089	1067	1089	0.98
18	24	0.0068	0.33	11.7	0.7	2	23	1276	1298	1275	1298	0.96
19	24	0.82	40	5.2	2.1	2	23	1305	1326	1304	1326	0.95
20	24	0.0045	0.22	12.3	0.3	1	23	1359	1381	1359	1381	0.98
21	24	0.0013	0.064	13.9	2.5	1	23	1387	1409	1387	1409	0.97
22	24	0.00045	0.022	15.4	3.2	1	23	1583	1605	1583	1605	0.98
23	24	0.0018	0.087	13.5	0.2	1	23	1639	1661	1639	1661	0.98
24	24	0.00075	0.037	14.7	1.2	1	23	1667	1689	1667	1689	0.98

Sequence Information

Coding Sequence: atgtcggtggaaattatacagtcatttcctccgccgcctttgaaaagagcacgtgaaacaatatcgttgtcaaacgatggagcctctaaatgcgcggaaatatttgttacaaacaatgccgacaaatggacttttttctgtgcctattgccaaaaggctacctgtgatataggcgctttcatttgtcacatcagattagaacatttgaatagtcagagcgatcagacacctgaactggaaaacaatgttcctACAAATACAAATGCCGAGGCATCTACACAAACCACACAAGCAGTAGACGAACTTAGGATAGACGGTCCACAACAGTCACCGCAAAATGATATAATTAAAGAAGAACTAACTATTATGGACAATGAAGAACATGTACAAACGATTTGTTCTAAAGTTTCGCAAATAACagacattacttcattggagcagcctgaaagtgttgatattgctaataagAATCCTTTGACAGCATCAAATCCTGCAGACAATAGCCAACAGGAATATTTTCTCATAACACAGATAGATGAGTCAGCAAAAACTCATAATACTGAAAGTATAGAAGACAGAACGAACAATTTAGGATGCCACACGAAATTACCCTTTAGTTGCAAAGAATGTCTTAGAAATTTTCCCACAATAAGATGTTTAAATGAGCACAAAAAATCGCATGACAATAAGAGGCATTTGCCATGTCCCCTGTGTCCGACAAAACACAAAGAAAGAATGCTTATTACACATATTTTGACGCACGAAAGCGCAAACTGCTTTCCATGTCAGGTCTGTGGCATAGTATATAACAGTCAAGACGAACGTCTGACACATTGGAAGACACACGCCAATGAGCAACCGTTTGATTGTAAAATTTGCTATCGTCGTTTTTCTAAACTAGAATATCTAACGCATCACTTAAAAACGCACAAACAATATCAGTGTAATTACTGTGCGTGTGCAGTCTATTCCAATAAAGTTCTAACAGATCCTTATGTTTGTAGCGAATGTGAAAAGTTGCATGTTATAAAGCAAAAAGAAGAACCAGAAAGTTCATTTAATCAAACGTCTCTTGAATATGATTCGAATGAGGAAACCATAGCAATATGCAACGAGGCAGACCAGGAATTTATTGAATTGCCTGCAACCTCTAATAGAAACGATGAAGTAATTGATGATCTTAACAATGATTCAAATAAGCGTACATCTTTTTCTCCAAAAAAGGAATTTCTTAACGATGATGAATTATCAAATGAATTTGACTCATCAAGTGTAGAATTTATTGCTGAAACATACCACATTGATTGTGACGTTGATGATGATGATGATGTACCCAGTGGTAGTGTTTCCAAAATATCGACCCCAGTTAGAGTCGGTTTAGAGGGGGATTTATTAACGTATATATGTACATATTGTGAACAAGTTTTTACATCTGAAAAGGCCTTAATGCTCCACACAAAAGTTCACATCAATAATAATGACATTCCAAATATATGTCCTTATTGCCATAAATGTTTCCAAAGTAAATCGGTCTTAAAATCTCACATTGTATCAAAACACAAAAAGAAGTACACATGTCCCCTGTGTCCGACGACTTATAGAAAGGAACACAATTACATTAGTCATGTCTTGTCGCACGAAAACGATTCGTGCTTTCCTTGTCAGaattccattgcctcatcaaatcggccacacaatatacaagaggaatATTTTGTGGTAACACTAGTGGATAAGGAAGACTCACAACAATCCCAACTCAATGAGGAAATTACTGAAGACAATTTACACAACACAAGGGATGACACTGACACAGatgaatcggacacagtttcctgttattctgccaatgagactaatgacacacatttagaaagtcagcaggacaatagtgccacttacagcaaaccgcatacaaaaagaaggaaaaaaaatctcggagtagaagaagacactgagttattacaccacaaatgtccgtattgcaaattgggatacaaaactaaacaggcggtatttcaacatatattacataatcatgacgaaaaTTATCACCAGAAATTACCATGGAAATGTGACGAGTGCCATAGAGGTTTTCTGACCACCAGTGGTTTGAATGCGCACCTAAAATCCCACGACAAAGACAGACATTTACAATGTCCCGTGTGTTTGTCAAAACACAAAGATAACTATTTTATTACACATGTTATGACGCACGAAAGCGACACCTGCTTTCCATGTCAAGTCTGTGGCCAACTGTATAACAGCCACAAGGAACGTATGCAACATTGGGAAATACACGCCGAAGAGAAACCATTTTATTGTAAAATTTGTTATCGCCGTTTTCGCAAACAACAATATCTAACACATCATTTAAAAACGCACAATAATTATCAGTGTAACTTTTGTCCACAACAATTTAATTCAACTGTAACTCAACGACCACCCTATGTTTGTGCCAGTTGTAAAGATTTGCCCGATATAATGCAACATATAAAACATCTAAGATCATTGGCTTACAATAGTCATGTATTCGAATCGGATGAGGAGACTTTTACAACATTTCCAAAACCAGCTGCTCAACACAATGAGGAATTTATTGACAACAAACAAATCCCTCAAAGAAACGAGGAGTCAAGCAATGAACCTAACAATGATTCAATGGCTAATGCTGCAGTATCCGTAAACGAGGAAATAGACAACGAAGAAGCATTTTCATATGAAGATGGCTCAGATTTAGAATTTATTGATGATAGTGTTGATAATGACGACAATGTACCCAGTGGTAGTGGCCACAATAAATCGCCCTCACACCAACAAACAATACAGTCAGAAGAAGGCTTGTACAATTGCCTACATTGCAAAAGAGCCTTTAATACACAAAGGGCTTTAAGTACCCATACAAAACGAACTCATATTAATCAATCGGACCCCAATTGTCCCTACAATTGTTCTTATTGCAATAGGGGGTTCCAAACAAAATCGGGCCTAAATTTTCACGAAAAAACCCATGATAAAAATAAGTACGAATTTAAATGTCCTTTGTGCTCGATAACTACTTTCAGAGAATGCGATTTCATAACACATGTTTTGTTACACGAAAGCCCCACCTGCTATCCTTGCCAAGTGTGTGGTAAAATGTGTTCCACCTCTGAAGAACGTATGGCACATTGGGCGACACACGTTCAAGAGCGACCATATGGCTGTAAATTTTGTTATAGGCGTTTTGCTCGAAAACAGATACTACACCGTCACATGAGAAGTCATAAACACAATAAATCTATCAACAATACAAATCCCAAACGACCTGAGGAAATATCTACAAATGCTCAACAGCAGTCAGCTTTAAGTGATATCATTAAAGATGAACCAACTAATAACAGCAATCAAGAGGACTTACAAGCCATTTCGCTGACCGAAAATAATGAATCAATGAATCTCATTGCTTGTAAGAATTCCACACAAACATCTCAAGATCCTGGGCCTGAAATGAACCAGTCTGTTTTTACGATAATACCAATAGATAGACAACAAACTCAAAAACAATTAATATCTGAGCCTGGTGCAGCAGCAAGCACTGAATTCGTTTATATACAGAATGCAGCAGCTGGAAAAAGTGAAAACGATGAATTCGATAAGGATGATCACATTGAAGATGATGTTCTTGATTTCGATAATGTTTCTTATTATTCACCAAATGAAGATGATGATGAtggtgatgacttggattatgaaagtaacgatgataatgaagccagtggtagtaagacgaaaataatgagaaagagcaaagccctagcggaagacagtaacttatcgcccgtcaagtgtccatattgtactgctgtatttaaaactaaacatagcgctgccggacatatacaacgtaaccatgacaaagaATTACCCATAAAATGTGAAAAGTGCCAAAGAGGTTTTCTCTCCACAAATGGCTTAAAAAGACACTTCAAATTTCATGATGCAAATAACCAAACAGAGTGTCCCGTGTGTAAAACACAACACTTAGAAGGCTACTTTATTACACATGTTCTGACGCACGAAGGCGACAAGTGTTTTCCTTGTCAAGTCTGTGGCGAAATATATACCAGCTATTACGAACGTCTAAAACATTGGAATACTCATGCGAAAGAGAAACCATTTGCCTGCAGTATTTGTTATCGGCGCTATAGTAAACTACAGTATCTAAGGCGTCATTTGAAAAGTCACAATCAATATGAATGTAATTTCTGTTCATCAAAATTCAATTCATCTAAAGCTCAACGATATCCCTATGTTTGTACGAAATGTGAAGAATTGCCCGATATAAAGCAGAAGATAGATCATTTAAATTCATTGCTTAATCACAATGATGCACTCGATTTGGAAAAGAATGTTAATATAACATCAAATCCTGTAGACAAATTTGTTGTAGCCCAAGAAACACAAGAAAATAAGCAACCCATAACACAAGAAGCCTTGGCAGAAATTAAACAAAAATCGCACAGCAACAGTTCTTTTGTCGATGACGATAATAATGGCTCAAATATGAATTTCTCTTGTTATAAGTATGCCAGCGATAATGATGATGTTTTAAATGAAGATAACTCAAATTTAGAATGTACTGAGGATACACTTGATAAAACCCAACCATCAACAGAAGTCTTGCCAAAGAAACGTAAATATATCAGAAAAGCGTTACACTCTGGAAAGCTCTTAAAAACTCACATGAGTCAAATTGGTTTTAAATACAAGTGTCCGCAATGCCAACGAGAATTCCAATCCAGATCGACCCTTTGTCAGCACGTAAAAGCCCATGATAAAAAGAATTTACTCAAATGTCCTGTGTGTCCTAGCAGCAAATTCGGCGAAGGTTTATTTATTGCTCATGTCATGTCACACGAAAATGACACCTGCTTTCCCTGTCAGGTGTGTGGTAAAATATTTGAATTCAATGAGGAACGTATCACACATTGGAAAACTCACATCAAAGAGAGGCCATACGATTGTAAAATTTGTTATCGCCGTTTTGCCCAAAAACCTATACTCACGCGTCACATGAAATCGCACAAGTAA
Protein Sequence: MSVEIIQSFPPPPLKRARETISLSNDGASKCAEIFVTNNADKWTFFCAYCQKATCDIGAFICHIRLEHLNSQSDQTPELENNVPTNTNAEASTQTTQAVDELRIDGPQQSPQNDIIKEELTIMDNEEHVQTICSKVSQITDITSLEQPESVDIANKNPLTASNPADNSQQEYFLITQIDESAKTHNTESIEDRTNNLGCHTKLPFSCKECLRNFPTIRCLNEHKKSHDNKRHLPCPLCPTKHKERMLITHILTHESANCFPCQVCGIVYNSQDERLTHWKTHANEQPFDCKICYRRFSKLEYLTHHLKTHKQYQCNYCACAVYSNKVLTDPYVCSECEKLHVIKQKEEPESSFNQTSLEYDSNEETIAICNEADQEFIELPATSNRNDEVIDDLNNDSNKRTSFSPKKEFLNDDELSNEFDSSSVEFIAETYHIDCDVDDDDDVPSGSVSKISTPVRVGLEGDLLTYICTYCEQVFTSEKALMLHTKVHINNNDIPNICPYCHKCFQSKSVLKSHIVSKHKKKYTCPLCPTTYRKEHNYISHVLSHENDSCFPCQNSIASSNRPHNIQEEYFVVTLVDKEDSQQSQLNEEITEDNLHNTRDDTDTDESDTVSCYSANETNDTHLESQQDNSATYSKPHTKRRKKNLGVEEDTELLHHKCPYCKLGYKTKQAVFQHILHNHDENYHQKLPWKCDECHRGFLTTSGLNAHLKSHDKDRHLQCPVCLSKHKDNYFITHVMTHESDTCFPCQVCGQLYNSHKERMQHWEIHAEEKPFYCKICYRRFRKQQYLTHHLKTHNNYQCNFCPQQFNSTVTQRPPYVCASCKDLPDIMQHIKHLRSLAYNSHVFESDEETFTTFPKPAAQHNEEFIDNKQIPQRNEESSNEPNNDSMANAAVSVNEEIDNEEAFSYEDGSDLEFIDDSVDNDDNVPSGSGHNKSPSHQQTIQSEEGLYNCLHCKRAFNTQRALSTHTKRTHINQSDPNCPYNCSYCNRGFQTKSGLNFHEKTHDKNKYEFKCPLCSITTFRECDFITHVLLHESPTCYPCQVCGKMCSTSEERMAHWATHVQERPYGCKFCYRRFARKQILHRHMRSHKHNKSINNTNPKRPEEISTNAQQQSALSDIIKDEPTNNSNQEDLQAISLTENNESMNLIACKNSTQTSQDPGPEMNQSVFTIIPIDRQQTQKQLISEPGAAASTEFVYIQNAAAGKSENDEFDKDDHIEDDVLDFDNVSYYSPNEDDDDGDDLDYESNDDNEASGSKTKIMRKSKALAEDSNLSPVKCPYCTAVFKTKHSAAGHIQRNHDKELPIKCEKCQRGFLSTNGLKRHFKFHDANNQTECPVCKTQHLEGYFITHVLTHEGDKCFPCQVCGEIYTSYYERLKHWNTHAKEKPFACSICYRRYSKLQYLRRHLKSHNQYECNFCSSKFNSSKAQRYPYVCTKCEELPDIKQKIDHLNSLLNHNDALDLEKNVNITSNPVDKFVVAQETQENKQPITQEALAEIKQKSHSNSSFVDDDNNGSNMNFSCYKYASDNDDVLNEDNSNLECTEDTLDKTQPSTEVLPKKRKYIRKALHSGKLLKTHMSQIGFKYKCPQCQREFQSRSTLCQHVKAHDKKNLLKCPVCPSSKFGEGLFIAHVMSHENDTCFPCQVCGKIFEFNEERITHWKTHIKERPYDCKICYRRFAQKPILTRHMKSHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -