Basic Information

Insect: Calliphora vicina
Gene Symbol: -
Assembly: GCA_958450345.1
Location: OY288232.1:120538677-120547182[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.15 13 7.4 1.0 1 23 1700 1723 1700 1723 0.91

2 12 8.7 7.6e+02 1.9 1.5 1 23 1886 1908 1886 1908 0.92

3 12 0.00088 0.077 14.4 2.8 2 23 1911 1932 1911 1932 0.97

4 12 4.3e-05 0.0037 18.6 0.2 3 23 1940 1960 1938 1960 0.98

5 12 8.7e-06 0.00076 20.8 5.8 2 23 1967 1988 1966 1988 0.97

6 12 9.9 8.6e+02 1.7 0.1 5 23 2001 2019 2000 2019 0.96

7 12 0.043 3.7 9.1 0.1 2 23 2058 2078 2057 2078 0.96

8 12 0.00027 0.024 16.0 0.3 1 19 2084 2102 2084 2106 0.95

9 12 5.9e-06 0.00052 21.3 1.8 1 23 2114 2136 2114 2136 0.99

10 12 0.00021 0.018 16.4 6.5 1 23 2142 2164 2142 2165 0.96

11 12 0.0012 0.11 14.0 6.4 1 23 2170 2192 2170 2192 0.99

12 12 0.0032 0.28 12.7 6.0 1 23 2198 2220 2198 2221 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.15	13	7.4	1.0	1	23	1700	1723	1700	1723	0.91
2	12	8.7	7.6e+02	1.9	1.5	1	23	1886	1908	1886	1908	0.92
3	12	0.00088	0.077	14.4	2.8	2	23	1911	1932	1911	1932	0.97
4	12	4.3e-05	0.0037	18.6	0.2	3	23	1940	1960	1938	1960	0.98
5	12	8.7e-06	0.00076	20.8	5.8	2	23	1967	1988	1966	1988	0.97
6	12	9.9	8.6e+02	1.7	0.1	5	23	2001	2019	2000	2019	0.96
7	12	0.043	3.7	9.1	0.1	2	23	2058	2078	2057	2078	0.96
8	12	0.00027	0.024	16.0	0.3	1	19	2084	2102	2084	2106	0.95
9	12	5.9e-06	0.00052	21.3	1.8	1	23	2114	2136	2114	2136	0.99
10	12	0.00021	0.018	16.4	6.5	1	23	2142	2164	2142	2165	0.96
11	12	0.0012	0.11	14.0	6.4	1	23	2170	2192	2170	2192	0.99
12	12	0.0032	0.28	12.7	6.0	1	23	2198	2220	2198	2221	0.96

Sequence Information

Coding Sequence: atgacTGAAAATGTTCAGTGTCCAGTATGTACTCTATACCTGCATGCAGGCATGAACCTTTCGGATCACTTGGAGACACATCCGAAAGAACAAGTGATTCGAGCCCTAGTACAAATGACCATATCTGGCACAGGAGTTGGGAGCAATAATACATTGGCAGCTGTTTTAGCTGGTGATAATGGTAACAAAAAACCAGCAGTAGAATTGGACGAGAAACCTTTGCCAAACATAAAAGATAACGAGCTTAATATTATCAGTACGGGCAATAGTTGCAGCGCCAGCACAAGCAATTCTGCCAGCAATTGTTCATTGTCAAACCAAAGTGTTAGTAGTAGTCAAAATTCTAATAACGTATTAAATTTTTCCGGTACTAAAATTGAACGTCATAATGAAAACGAGCAGGATAAAACGCAAATATGCCCACCACCCAAGCCGATCAAAACGGTGGTTAAGTCGGAATCGAATACTGTGTCAATGGGAAAAGATAATGTGTCTGCGAATGAAAGTATGAATCAATGCTTTTCGAAGAAGAATTTCGATCAATCGAATTCATCCTCAAACACTACAACAAATCCAAGTCATTCATATCATCCAAATGCTTTAGAATTGACCAATACAAACAATgttcataataattttaatgtgtTTGGCGGGAATCCTCGCTATGAGCAGCATCAGCGTAATGGAGTAAGTAATCAAAATCCGTTACATACACCACCACATATGCCGCCACCACCACCTCCATCATCAGCCCTAAGTCATTCTGGTCAACATCAAGAAGTAGTCCGCGGAATTGTACCAGCGGGATCTAATGGGACGTTTAATtctatacaacaacaacaattgacAGCTCCACCACCCCCACCGCATCATTCATCATCGCATTTAGGCAATACATCAAATAGTCAGCGTCAGGCTCACATGTTTGCAGCAGGTCAACATCAACCGCCACCATCGAATTCTCAACATCAACAAAGTTTAAAGGTTATATATACGCCAAATTTGCCACCACCGCCTCCGCTccagCTTTTCACTTATCAGCCGCAAACACATTTGCAACATCATCAGAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAACATAATCAGAATAAGCAACAAGTGACAGCGTCATTGCCAACGCAGCATCAAACATTGCAAACCCATTCagttttacaacaacaacagcagcaacatctTTTGCAGCAAACGTTGCCACACAATTTAAGGATTCAAGTACCACCGCAACCGATTCCATCAAAACATTCATATTCGCCAAAAAACAATGGTTTGCCAACTCAGCATCATTCAACATCTTCTACAAGGAGTAATCAACaccaacaacatcagcaactaCCCAAAACAGATGTGTCACAACACCTGCAGCAGGAACAGCAACAATCACAAGCTAACTctgaaaatacacaaaattctaaTAATCACATTTTCAATTcgaatgaaattttgaataaatcaataaaaggaACATCTTCAACGGCAGTGCAAAATACAAATTCCAATATACTATCGTACCCACAAGTTTCAATAAGTCCATCTGCTGCTTCAACATCAATGGCTGCTGTAGCTGCCTCAACATTAGGTAGACACACAAATTCACCATTTGCAGCGTTATTAGCTGCGGCTGCTGGTGCTCCATCGCCTTCTAATGCTTCGTCAGTTTTACGGTACGCAGAGTCGCCGGTTGCACATTATTTAGAACGGGAAAATGGCGATTTCATTGTACAAGAAACTCCCAAACATATTGTTGAATGTGTTGAGACAGATAATGGAGAGTTTTCCGTCATTGAACGTATATACCAATCACCACCCAGTGTTTTACATATTCATGACGACGATGATGACGACGACGATGATGACGATAATTGTGACGACCAGGCTGAAGATGACCAAAACGAATGTGTTGATAGTAAGTCTAAGTCTAAGCTTGATATTGACCCCAGTGATAAAACTGAAGATGAAATAGATGAAAAGCAAAGGACAACAAAATCGTTCTCTAATGACGATGCAAAGATGTCTATAGAAACGAACGATTCTAAAAGGAAACCTAAATCTAAAGATGAGTCTTTGGAGGATAAAGAAATTGTTGATTTTGTAAGCATTTCGAGTGACAGCGGCGACGAAGAAGAATTCATATCTCAAGAACGAaaagattataaaaataccaccgaaatgaataaaattataaagaatcAAACTTCCTCCACATCAACGCTCTCAATGTCTACAACGTCACCGCTCTCCTTATCGACATCCTCATCTGTATCACCTTCATTAAATGGTGCATCCAATGGTGGTGACGATCAACAAATAAATTCTACACCATCCACTTCAATACATTCTACTTCTTCTTCAGCCACGGCAAATACAAACCAAACACAACCCAATTCTGGAGTCACCACCAATACAAGTAGTCGAAAGAAATCATCGAAAAACACAATCACAGTTTTAAGTGATGTacaattgaatttaaatgaatatttggATTTAGTGGGTAATATAATTGCTTCGAGTAAAGTAGCGGCACAGCGTAAGACATTTGCGTCGATAGCTCCTATTCCTTTGGTTAAAATCGAAAAGGAAGAGCCTATGGATGAATACataacaacaaacacaacaacatcagcaacattAACAACGTCAACAACAACATCTAATTTTGAGACTCCACCACAACCACCAACACCTTTAAAGGCCAACAAACATGAGACTGAAGAAATAACTGATACCCCTAGCAGTAGTAATagtaaacaaacaacaaataatagtaatgtaattttaacaaatgAACTAGAACATGATGAACAAGAAGAGAAAAAACCTCAGGTCTTCGAAAGTGCTACCGAAAATGAAATTGGAAATTCAAACGTCTTTTCGAATGCCTCATCTAGCCAAACGACTATAAATTCCAGTCACGTTACCAGTGTTATACGTATGGCCACAACTAGTCAACACCAATCCCAGCTGCAACAACATCTGCTGAATGCTGTAGAAAGCAATAAAAGCTCTATAGAAGCTGAAGATCTGTCGCAACCCCAACGTAATGTTCAATCTTTGTCAAACTCCAAATCAGTAGGCCAGACACCATTGGCTCGCAAAGGTCCCAAAAAACTTGTTATTAAGCCTAAATCTTCAAAGACTGAAGTTTTGCCACCAACCACAACCACTGCAAATAAACCAAACTCAAATCTAGTACATGAAGATCTGGAAATGCCAACGACTTCCGCTAAGGCTAGGCAAGAGTTTACCAAACAAAGTTCTCTCGAAGAGGATGCGTTTAATGCCACAGATATAAAGGTTAAAAATGAACCCATTACGTCTATAACATatgaaaatcaacaacaacattctCTCTATCAACCAACTACGAGCTTCAGTATCTTGGAGCAACATCTAAATTCTAAAGAACCTATTCTCGAGTTTAAGGAGGAAAAACCATGCATAACAGAAGCTAGTGTGCCGCCAACGTCTATCATAAAAGAAATGAAGttagaaaataatgttaatgATGATGCACGTGTACTTTATGATTTTGCTAATTCtaaaaaatctcaaaacgaaACACCGCCAACATTTCCATCTTCCACATCGCTTTTTGCAAGCAAACAAACTTCCATAGAGATCACATCAGCCGGAGAGATTCAGCAGCAGCAATTAACTAAGGAAATGAATCATGAGCATGATACATCTTCTTCATCGTCATCAACATACTCATCACAATCAGCTATGGACGCAACAATGCCATCAGAAGAGCTGAACGAAAGTTCTGCTACAAATACTTCTGCTGCAGTAATTGGCCaaattcaacaacaacaacaaccaaatcAGGCTTATACTGATTTTCACTTCAATTATCTGTATAATAATGGTGGTACTAATGTGATGGCGGTTACTTCTGCTGAACAAGCTGACATAAAACAACCACAGCAATTTCcaacattttatcaaaattccaacaataacaacaacaataacgatACAACGTTGTTGGAAGATTCATCATCTAGTAAACACTATACGGAAtatcagcagcaacaacagcataaTCATCATCCGGTACAGCATCAATCGGCTGTGTCACACCATCAATGgtttaataatagtaataactATCAAACGTCTGAACCTAACGTTACACCACTATCTTCAAATCATTCAGTTTCCAACATGAACAATGCTTTAGATGGAAGTGAAGTTAGTAAATATTTGGATTTGGATTCGTGTAAACGCGAGCAAAATATTGATATAATTGTTGCCGATCGTGTAACTGTACCACCGCCGCCACCACCATCTTCCTCGACTTCGTGTTCGTTTAATGGCGCAACTGACAACAGTATGGCTGGTATCTGTTCAACGGCAGCCACCTTAAATATACGTACCGATGAGAAAATGCCAGCTAAAGGTGAAATTTCTGAACAGGAAAGCAATTGCGATATTGATAATTCGTGGAGTCAACCGATGTATGGCGATATATCGGCACGCTTTTTCAAGACAACATTTCCCGGCATCTTTCCGCAAGACAACGGTTGGAATCATGAGGAATATTTTACTGTTCAGGATTTGAGTGCCTCCACAACTGCACAGGCTGCTACTAGTGCCAGCAACAGACTGAAGAGCTTTGAGCCGACcaatagcagcagcaacaacaacagcaatggAATGCCAATATTTTCCCAAAATTCTAATGACAATTGTAATATCGATGTAATGCCGTCAACATCTGCTAAAATCCGCAAGAGACGTAAACGTAGTTCTCAAGATGGAAAAACGTCACAAACAAATGGCAAGCGTATGCAGCCAACATCAACAGTAACCTCACAACAAATGTTGATGCAACATCAAAGTGAGATACCGGAAGTtgagtttaattttcaacatcagCATCATTTACAGCAACAAAGTTTGCAACACCCCAGTACGTCAACAGCATTTTTGGCAGGACCATCAAATGCTAGTACTGCCTTAACGTCTGGCTTTATGGTGCAACAGCAACAGCTGCACACGCAACAGCAGCAAGCGCAGCCTCAGCAACACCAAACCCAACAGAAACAACGCACAAAAGTTTATGAATGCGGCCATTGCAATGCAAAATATTCCAAACTTAAAGATCGTAATGCCCACATGGTTGATTCCCACAATTATATACGCCAAAATAGAAGATTAGTATGTCCCGCAACTGGCCTTGCCACACCCCTGACGAATTCAGATATGCAAGATGTTGCTCTACCCACGACAAGTGCAGCTGGTAGCATGTTAATGACTCCTTTGCAAACTACTGACTGTGTGGGCGATTACAAACAGAGTATagtaaaaatagaaaatgaaaatattcaacGGGATCTAACGGGCGTAGAACCAATCAATGCCAACATAAGTGCTAAAACTGAAATTATGGAAGACGACAAACTAAATGTAGCCCTAGTACCCATGAACGCACCAAATGGTGATGCAAACCTTGAATACGATACAAAACCACCAACCAATAGTTTGCCATTGTCGCTGACAACCCCCACCAGTAAATTAACAACACTCTATCGCATGTTGGTATCGTTTAATATGACAACATTAAAACAAAACCAAAGCCTTTCCGAATTCGATGAGAATCTTATAAAATCCTCGATATTCTTTTGTTACATCTGTCGTCAGAATTTCAATTCAGTTAAATTCTACGACGCCCATTTGACCGAACATCCTGCTGAATGTTTTACTTGCGGCAAAAAATTCCAGCGGTGGAAAAATTTCTCGTTACATTTAAAACGTCATTTGGGTTGGAAGGAATTCGGTTGTACAGTATGCGATAAGAAATTTGTGGTACGCAGCGCTCTCGTTGAACATATGCGTATGCATTCTGGACTTTCGCCGTTGAAATGTAAAGTTTGTGGTAAACACTTTAAACGCTATTCGAACTTAACGCAACATCGTAAGCGACATTCGAAACAAATCATTCGTAGGAAAGAGTACGTTTGTTATTGTGGCGAAGTCCTACCATCCAAAGCACGCTTCTTATGGCATAAAGAAACGCATGATTCGAAACCGAAATGTTGTCCCCATTGTTGTGATCGTTTCGTACATGTCAACTCTTTGCGACGTCACATACGTCTCGCCCATTCAGATAAATTCGATTACACTGAACCGATGGAGTGTCCCATCTGcaagcaaatatttgccaaagCCTCTATGAAAGCTCACATGGCAACGCATTCCACAGAAACGCATTATGATTGTGCTATTTGCAGCAAGTCCTTCTCAACAAAATGGAATTTGAAAATTCATTCTTGGGTACATGCAAATCGCACCGCCAAACCCTTCAAGTGTGAACACTGCCCCAAGGCATTTGTGCGCGAGGTAGATTTCAAGAATCACATGAATTCCCATAAACAAATCAAACCATACACCTGCGAAGTGTGTGGCTGTAAGTTTATACGCAAATACAATTACATGCGCCATAGAAGGGAGCATCATGGCAATAAAAAGTACACCTGTGATTTATGTAAAAAGTCGTTCCATCGCCACTACTATCTCATCGAGCATAGACGCATACATACCGGCGAACGACCTTTTCAATGCACGATTTGTGGTAAAAGTTCAACTACCAAAACTAATCATAACAAACACCTAAAGATCCATCATTCACGGGATCCATTTACGGTGGAAGTATAA
Protein Sequence: MTENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGTGVGSNNTLAAVLAGDNGNKKPAVELDEKPLPNIKDNELNIISTGNSCSASTSNSASNCSLSNQSVSSSQNSNNVLNFSGTKIERHNENEQDKTQICPPPKPIKTVVKSESNTVSMGKDNVSANESMNQCFSKKNFDQSNSSSNTTTNPSHSYHPNALELTNTNNVHNNFNVFGGNPRYEQHQRNGVSNQNPLHTPPHMPPPPPPSSALSHSGQHQEVVRGIVPAGSNGTFNSIQQQQLTAPPPPPHHSSSHLGNTSNSQRQAHMFAAGQHQPPPSNSQHQQSLKVIYTPNLPPPPPLQLFTYQPQTHLQHHQKPPPAYGTAISQIRSQHNQNKQQVTASLPTQHQTLQTHSVLQQQQQQHLLQQTLPHNLRIQVPPQPIPSKHSYSPKNNGLPTQHHSTSSTRSNQHQQHQQLPKTDVSQHLQQEQQQSQANSENTQNSNNHIFNSNEILNKSIKGTSSTAVQNTNSNILSYPQVSISPSAASTSMAAVAASTLGRHTNSPFAALLAAAAGAPSPSNASSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDDDDDDDDDDNCDDQAEDDQNECVDSKSKSKLDIDPSDKTEDEIDEKQRTTKSFSNDDAKMSIETNDSKRKPKSKDESLEDKEIVDFVSISSDSGDEEEFISQERKDYKNTTEMNKIIKNQTSSTSTLSMSTTSPLSLSTSSSVSPSLNGASNGGDDQQINSTPSTSIHSTSSSATANTNQTQPNSGVTTNTSSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRKTFASIAPIPLVKIEKEEPMDEYITTNTTTSATLTTSTTTSNFETPPQPPTPLKANKHETEEITDTPSSSNSKQTTNNSNVILTNELEHDEQEEKKPQVFESATENEIGNSNVFSNASSSQTTINSSHVTSVIRMATTSQHQSQLQQHLLNAVESNKSSIEAEDLSQPQRNVQSLSNSKSVGQTPLARKGPKKLVIKPKSSKTEVLPPTTTTANKPNSNLVHEDLEMPTTSAKARQEFTKQSSLEEDAFNATDIKVKNEPITSITYENQQQHSLYQPTTSFSILEQHLNSKEPILEFKEEKPCITEASVPPTSIIKEMKLENNVNDDARVLYDFANSKKSQNETPPTFPSSTSLFASKQTSIEITSAGEIQQQQLTKEMNHEHDTSSSSSSTYSSQSAMDATMPSEELNESSATNTSAAVIGQIQQQQQPNQAYTDFHFNYLYNNGGTNVMAVTSAEQADIKQPQQFPTFYQNSNNNNNNNDTTLLEDSSSSKHYTEYQQQQQHNHHPVQHQSAVSHHQWFNNSNNYQTSEPNVTPLSSNHSVSNMNNALDGSEVSKYLDLDSCKREQNIDIIVADRVTVPPPPPPSSSTSCSFNGATDNSMAGICSTAATLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNHEEYFTVQDLSASTTAQAATSASNRLKSFEPTNSSSNNNSNGMPIFSQNSNDNCNIDVMPSTSAKIRKRRKRSSQDGKTSQTNGKRMQPTSTVTSQQMLMQHQSEIPEVEFNFQHQHHLQQQSLQHPSTSTAFLAGPSNASTALTSGFMVQQQQLHTQQQQAQPQQHQTQQKQRTKVYECGHCNAKYSKLKDRNAHMVDSHNYIRQNRRLVCPATGLATPLTNSDMQDVALPTTSAAGSMLMTPLQTTDCVGDYKQSIVKIENENIQRDLTGVEPINANISAKTEIMEDDKLNVALVPMNAPNGDANLEYDTKPPTNSLPLSLTTPTSKLTTLYRMLVSFNMTTLKQNQSLSEFDENLIKSSIFFCYICRQNFNSVKFYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHSKQIIRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETHYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00922372;
90% Identity: -
80% Identity: -