Basic Information

Insect: Calliphora vicina
Gene Symbol: -
Assembly: GCA_958450345.1
Location: OY288235.1:110447469-110454974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0098 0.85 11.1 0.1 1 21 1069 1089 1069 1093 0.91

2 8 0.00026 0.023 16.1 2.0 1 23 1579 1602 1579 1602 0.97

3 8 2.2e-05 0.0019 19.5 3.4 2 23 1629 1650 1629 1650 0.97

4 8 7.4e-05 0.0064 17.8 2.2 1 23 1656 1678 1656 1678 0.99

5 8 7.5e-06 0.00066 20.9 0.6 1 23 1684 1706 1684 1706 0.98

6 8 0.028 2.5 9.7 2.2 1 23 1712 1734 1712 1734 0.96

7 8 0.0018 0.16 13.4 0.1 2 23 1741 1762 1740 1762 0.96

8 8 0.038 3.3 9.3 2.2 3 23 1770 1790 1768 1791 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0098	0.85	11.1	0.1	1	21	1069	1089	1069	1093	0.91
2	8	0.00026	0.023	16.1	2.0	1	23	1579	1602	1579	1602	0.97
3	8	2.2e-05	0.0019	19.5	3.4	2	23	1629	1650	1629	1650	0.97
4	8	7.4e-05	0.0064	17.8	2.2	1	23	1656	1678	1656	1678	0.99
5	8	7.5e-06	0.00066	20.9	0.6	1	23	1684	1706	1684	1706	0.98
6	8	0.028	2.5	9.7	2.2	1	23	1712	1734	1712	1734	0.96
7	8	0.0018	0.16	13.4	0.1	2	23	1741	1762	1740	1762	0.96
8	8	0.038	3.3	9.3	2.2	3	23	1770	1790	1768	1791	0.95

Sequence Information

Coding Sequence: ATGAGTAGTGTTTTAAATCATGACAATCAACAATTTGTTGTGGAAAATCAAAAGCAGCCTCAATTGCCCGATCATTTGAAATGTGGCGAAGTGTTTACTTGGCTATGTGCTGGAGAATTGTATGCAGTGGAATGTAAATTATGTGAAGATCATCCTTTGTGTCCACTATCGGAATTTCCTCAGCATATGCAAGTGTGGCATACTGATTGGGAGCAAACACACAACGATCATGATCATGATGATAATGAAGATCTGCAAGATTCAGAAGATGATGTTAACGATGAAGATCATTATGAGGAACATAATGATGAGCATGCTTTATCATTTACCACCGAAGACAGTGGCTTATTTGAGCCAGACGATTTATTACAAAGCGAAAGAGTTTCTAACCAAGTTTTTCTATACAATGATGAATTGTTAGAACCCTTTGAACAGGTATTAATAGAACACGACAATACCATAGACTCTATACAAATTAGCGGAGATGTTAATGAAGAAGAATGTTTGGAAGAAGTAAACAAACAGGTAGCAGAGGCGGCAGAAGTTGTAGCTGAGAGAGAGCCTGAGAAAAACAATGACTTTAGCATAAATATGACCTCTAAAAAcagaaaaagtaaacaaataaagGTCTCTAACGAAGTAACAGAGAATGAGAGAGAATTACGGTATTTACAAGAAATAACAGAGAGTCAAAGAGAATTAAATGTAATGGAAACGAATTCTTTAACAGAAACTGAAAATGTGaaggaaaaatcaaaaacaaatttaaagaatacAAAAGAATCAAGAGAATTAAGTGAAAATGAAACAAGTGAAGAGGAAAATTCTAAAACTAAtaatattgaaagaaaaaccAATGAAACAAGTGAAAATGAAAGTGAGACCAGTGAAATTGAAAGTAAAAAcggggaaaaatattttgaaaaggcTAAAAATAATGTTGAGCCTGCAAAGAAAACCAGAAAAtccttaagaaatttaaaagaaactaaagaacagttaaaagatttaaaagaaATGTCAGAAAATGAaacagaaataaatgaaaatgaaacaaaaaataaaaattataaagaaaaattgaaaGAACCCAGAGAGTCACAGGAACTAAGAGAAAAAGAAACTGAAACGAgtgaaaatgaaacaaaaaataaaaattataaaggaaaattgAAAGAACCCAGAGATTCACAGGAACTAAGAGAAAAAGAAACTGAAACAAGTGAAAATGAAACAATAACAAGTGACAAtgaaaaggaaataaaagaaaatataacaaatacatttaaatatgataaaattCCCGTTCAAATACCAAATTCTcctgatttatataaaaattctaaacaaaatttaacaaaaactagaaaatcttcaagaaatttgagaaataataaagaaattgaattaaatttctttggaaattccaaaaaacctcaaaattttataaacagcAAGAGAAAAATGTCGGAAAATCAAGAGCAATTGGAAGAAGAGGAACAAGAGGAAATGAAACAACCGGAATTGAATGAAAATGAAACACCTGACCTAGAAAAACTTCCAAAATTTGCCAGTACTCCAAGGAATGAAATACCAAGGGCTTCTAAAACAAGAACCACCAGAAGAAGTCTAAGAAAATTGTCCAGAAAGTTCAGCGAAGAGGAATTGGAACATTTGGAAGATGCTGCCAAATCTTCTCTTCATTCAAATTACCCgagaaataaaaaatctaaaaataaattagaaaagcCAGCAAAAGAATTAAACGAAGAGGAAGAGATTCACGAAAAAGAACTAAATATTGAAGAGAATATAAATGACAATGAATTTGAGCAACAAAACTCCGAACATTTTGAAGATTCTCCAAAATCTTTATTTTCTTCAGTCATAAATTGCCCAGCAAAAGAATTAAACCAAGAGAAAGAAGAAGAAATCCACGAAATAGAATTAACTATCGAAGAGAATATAATTGAAATCGAAATTGAGCAACAAAACTCTCCTAAAACTAGACAATCAAGGAGAAAACCTAGATATTCGGGAAGTGAAGCTGAAAATGATGAATTAAGCCCGCCTAAATCCCCTTTGGTTCCCCTTGAAAAGTCTACAAGACTGAGTAAAAGATcaagtaaaagaaaaaatacatcCCGAACAAATATGCTTCCATTAAATGATAATCTTACACCTACCAAAAGAATCAGAAGAAAAAGTTCCTGTGGAACCTcggatattttagaaaaaactacaaaacaaactTTGGTTACTcacttttttgtgaataaaagcaATAAAACTAAATCTCCACATTCCGAAGATTTGGAAACTTTAATTCAATCCTCCAGAATTTCGCCACAATTTGAGGAAAACTCTATTAACACTCCTTTAATGGAAGAAACAGACACATGCTCTCTTAATTCTTATATTTCTTCAAATCCTTCCTCCCCAGCCAAACTTTCCTCTCAGGGCTACTACTCTTGCGGCAAAGACAGCTGTTCACCCCTGCCCAGTGAACCCTTGTCTCCACTCTCCCCCATTACAGAAGAGGAACATTTTGAATTCTATGCAGCCAAAGAGAAACTAAACAAACATCATATTAGCTATTTAATACAACTGTACCAGGAACATAGCCACCTATGGGATCAATCCCATTCCAAATTCTGTGAACCTCAAGAATGTCGGAAATCCTGGCAATTGATTACCGATCAATGGAATGAGTTTTGCAAACGTCAGTTCTCTACAGCCGAAATACGCATACGTTTGGTTACGCTCTGTCAACGTTATGTGCAGGAAAGAGAACGTCTTGCATTGCAGGGAGAACTAGATGAATTTGCCAAATTCCCCTACTACGAACAAATGCAGTTCCTGGAGCAGCAAAAGTCTTTGCAACAGCGACGTGAGCAGCAGgaacaacaaaatgaaaagatTTTGGAAGTTTATCAAAATTTTCCGCTACTGTGGCATGTCAGCCAATATAAAGTGCGTCAGGCCAAGCAGAGGGCCGAGGCTTTCGAGAACATTAGCAAGACTTTGAAAATGGTGGGTTTAAAATTGTCCTCTATGGCGGTGCAAAAGCGCATACGTTCTCTAAGGAAATGTTATCGTTTGGAGAAAATACGCTTTTTGCATGCCCAAGTGGAGCAGACGCAATTTCAGCCTAACTTCAGGCATTATGAGAGAATGAAATTTCTGGATAAACATATAGATCCCTTCAGCTGTCGTATTTGcgggaaaatatttgaaaatttaccgGGTTTCCGGGAGCATTTGGAGGAGGAAAATCATGGTAATGTGCTGCAAGGAGATAATGAAAATGATGTAAAAGGAGAGGATAAAGAAACAGGAACATGTAAAGAGACTATGGATACAGAAAAGCAAGACTCTTTTCAGGTTAATGAAGTACTAAACAAACCTATTGAAAATGTGGCCGATTATCAGAATTCTGCTACTATATTCATTAATAACATGGATTATTATACCGAAGCCGATAATAGTTGTGACATTTTGCAAACATTTACCCCTTTGGCCTGTACCCCCAATCCGAACTTGGATCCTGTTACTAATTTGAACCTggattctttagaaaataataaagccATTATCCAGGAGGTGTTAATATTTCCCTGCAACACTCCCGCTGAACCCATTATAGATTCTTTGCATATAGAAGATCAATTAATGGAGGAAATTATGGAAAATGTTACTAATGATGATACATTCAGCAAGCAATCTTTGGATCATTTCATTAACTCGGTCACTAATTGTGAGGAATTGggagaaaataatgttataaatGAGGAGATTTTTACTGCTGTTGATATGTCAACGGAAAATGTCATTATTTTGGATCAACCAGATGTAATAACAGATCAAACTTTGGATGTTCCAAGTCCTCAAGCAAATGATGAAGAAATGATATCTAAAATGATACCAGAGATCAAGGAAACTGAGCAGAGTTCCTTAGAAAATGCCTCTTTAACTTCTCAATGTACCGACTTTTCTGAGGATCTGAAGTTAAATCCTGAACCCCTAGAAATCCCCCAGCCAGCCTGTAACGACTCGGATCCTGAATTTCACTCATCTGCTGATATCTCTACCATACCCTTGCCCGATCAAGAAATACACAAAATGATCGAACTATATCGTAAATATCCGCAAATCTGGAATCCAAATCATTTGGATTATAATTCAAGGATTTTAAGGCGACAGGCCTGGTGTACCCTCACAATGGAATTTAACTCGGTAGTGGGTAAACAATTCTCCTGGCGTACATTGCACCGCAAGTTGACAGACTATTCCAAGTACTATAAGAAATTGATAACGGAACAAAAGGACTACGAGGAGTTGGAGAATAAGTGGACTTTTTATGAGGATTTCAAGTTTTTGGATGATGTGCTTGCCGTCCATGACGAACTACAGCGCAGTGTCCATCATCGTgataacaatttcaaaatcattAATATCTACGAAACTCTGCCCCAGCTGTGGGACATTAAACATCCCGACTATAATAAACACTCCATTAAACAGCGCAATATCGAACTAATGTGCAACCGTTTGCAAGAGGAAAACAATCTTCAACTAACCACCGAACGTTTAAAAAATCGCCTGATCGAGCTTAGAACCCAATATCGGGCAGCCAAAAGGCAACGTTTGAAATGCGAAAGAAATCAACAAAAGTTTGAAACCGATTTTGTGTTCTATGAAGCCTTTAAATTTCTCGATCCCCACATAGACCCCTTTATATGTGAACAATGtaataaagaattcaaaaaattaaccGACTACAATCGGCATCTAAAGCGGGaacataaaaagaaaactatAGTGAAACTAGGCCCATTTTCGGTATTACCTCTGGAGCCGGGTGTCGACATGGCATTGCAAAATGTTTGCCATATCTGCGGCATTAAGTTTACCAGCCGCAGCAATTTGGTGCACCATGTTAAGCGTCACGAGGGCATACGAAATTACGAATGCAACATGtgtccaaaaaagtttttcgcCTCTCACTCCCTCAAAGTACACATAAGATCCCACACCAAGGAGTGTCCTTACACATGTGAAAAATGCGGCATGTCTTTTGTTAGTGCCAGCAAATTGAATCAGCATGCTAAGAggcattttgataaaaaagatTTCCAGTGTGATTACTGTCCCAAGAGATTCTATTCGGGTTTTGAAAAGGATCGTCATGAGAGGAGACATTTAAATATCAGAGATAAGGTGTGTGATATTTGTGGTAAGACATTTGTGGCGGGCTCCTCGTACTATACGCACATGATGTTGCACAGTGATACGAAACGTTTTGGATGCGATAAATGTGAGATGAAATTTGCCCAATATGCCGGGTTGTATAAGCATAAAAAGAGACATCATCCGGCATAA
Protein Sequence: MSSVLNHDNQQFVVENQKQPQLPDHLKCGEVFTWLCAGELYAVECKLCEDHPLCPLSEFPQHMQVWHTDWEQTHNDHDHDDNEDLQDSEDDVNDEDHYEEHNDEHALSFTTEDSGLFEPDDLLQSERVSNQVFLYNDELLEPFEQVLIEHDNTIDSIQISGDVNEEECLEEVNKQVAEAAEVVAEREPEKNNDFSINMTSKNRKSKQIKVSNEVTENERELRYLQEITESQRELNVMETNSLTETENVKEKSKTNLKNTKESRELSENETSEEENSKTNNIERKTNETSENESETSEIESKNGEKYFEKAKNNVEPAKKTRKSLRNLKETKEQLKDLKEMSENETEINENETKNKNYKEKLKEPRESQELREKETETSENETKNKNYKGKLKEPRDSQELREKETETSENETITSDNEKEIKENITNTFKYDKIPVQIPNSPDLYKNSKQNLTKTRKSSRNLRNNKEIELNFFGNSKKPQNFINSKRKMSENQEQLEEEEQEEMKQPELNENETPDLEKLPKFASTPRNEIPRASKTRTTRRSLRKLSRKFSEEELEHLEDAAKSSLHSNYPRNKKSKNKLEKPAKELNEEEEIHEKELNIEENINDNEFEQQNSEHFEDSPKSLFSSVINCPAKELNQEKEEEIHEIELTIEENIIEIEIEQQNSPKTRQSRRKPRYSGSEAENDELSPPKSPLVPLEKSTRLSKRSSKRKNTSRTNMLPLNDNLTPTKRIRRKSSCGTSDILEKTTKQTLVTHFFVNKSNKTKSPHSEDLETLIQSSRISPQFEENSINTPLMEETDTCSLNSYISSNPSSPAKLSSQGYYSCGKDSCSPLPSEPLSPLSPITEEEHFEFYAAKEKLNKHHISYLIQLYQEHSHLWDQSHSKFCEPQECRKSWQLITDQWNEFCKRQFSTAEIRIRLVTLCQRYVQERERLALQGELDEFAKFPYYEQMQFLEQQKSLQQRREQQEQQNEKILEVYQNFPLLWHVSQYKVRQAKQRAEAFENISKTLKMVGLKLSSMAVQKRIRSLRKCYRLEKIRFLHAQVEQTQFQPNFRHYERMKFLDKHIDPFSCRICGKIFENLPGFREHLEEENHGNVLQGDNENDVKGEDKETGTCKETMDTEKQDSFQVNEVLNKPIENVADYQNSATIFINNMDYYTEADNSCDILQTFTPLACTPNPNLDPVTNLNLDSLENNKAIIQEVLIFPCNTPAEPIIDSLHIEDQLMEEIMENVTNDDTFSKQSLDHFINSVTNCEELGENNVINEEIFTAVDMSTENVIILDQPDVITDQTLDVPSPQANDEEMISKMIPEIKETEQSSLENASLTSQCTDFSEDLKLNPEPLEIPQPACNDSDPEFHSSADISTIPLPDQEIHKMIELYRKYPQIWNPNHLDYNSRILRRQAWCTLTMEFNSVVGKQFSWRTLHRKLTDYSKYYKKLITEQKDYEELENKWTFYEDFKFLDDVLAVHDELQRSVHHRDNNFKIINIYETLPQLWDIKHPDYNKHSIKQRNIELMCNRLQEENNLQLTTERLKNRLIELRTQYRAAKRQRLKCERNQQKFETDFVFYEAFKFLDPHIDPFICEQCNKEFKKLTDYNRHLKREHKKKTIVKLGPFSVLPLEPGVDMALQNVCHICGIKFTSRSNLVHHVKRHEGIRNYECNMCPKKFFASHSLKVHIRSHTKECPYTCEKCGMSFVSASKLNQHAKRHFDKKDFQCDYCPKRFYSGFEKDRHERRHLNIRDKVCDICGKTFVAGSSYYTHMMLHSDTKRFGCDKCEMKFAQYAGLYKHKKRHHPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -