Basic Information

Insect: Calliphora vicina
Gene Symbol: znf711
Assembly: GCA_958450345.1
Location: OY288235.1:47850434-47852248[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.091 8 8.1 1.2 3 23 263 284 261 284 0.95

2 10 0.026 2.3 9.8 0.1 6 23 293 310 293 310 0.99

3 10 0.011 0.99 10.9 1.5 1 23 316 338 316 338 0.96

4 10 0.00061 0.053 14.9 1.5 1 23 349 371 349 371 0.98

5 10 0.0061 0.53 11.8 0.3 1 21 379 399 379 402 0.87

6 10 1.9e-05 0.0017 19.7 0.6 3 23 410 430 409 430 0.96

7 10 0.00046 0.04 15.3 0.2 2 23 439 461 438 461 0.96

8 10 0.81 71 5.1 1.2 3 23 471 492 469 492 0.89

9 10 5e-05 0.0044 18.3 1.9 1 23 498 520 498 520 0.96

10 10 6.6e-05 0.0058 18.0 3.3 1 23 526 549 526 549 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.091	8	8.1	1.2	3	23	263	284	261	284	0.95
2	10	0.026	2.3	9.8	0.1	6	23	293	310	293	310	0.99
3	10	0.011	0.99	10.9	1.5	1	23	316	338	316	338	0.96
4	10	0.00061	0.053	14.9	1.5	1	23	349	371	349	371	0.98
5	10	0.0061	0.53	11.8	0.3	1	21	379	399	379	402	0.87
6	10	1.9e-05	0.0017	19.7	0.6	3	23	410	430	409	430	0.96
7	10	0.00046	0.04	15.3	0.2	2	23	439	461	438	461	0.96
8	10	0.81	71	5.1	1.2	3	23	471	492	469	492	0.89
9	10	5e-05	0.0044	18.3	1.9	1	23	498	520	498	520	0.96
10	10	6.6e-05	0.0058	18.0	3.3	1	23	526	549	526	549	0.96

Sequence Information

Coding Sequence: aTGGACAATTGTGTGGTTTGTTTGTCAACAAATGCCGATATATTTTCCCGTATAAATTTTCAGTCCAGTGAGTGGCAAGAATGCAGCATCCAGCGTATTATAGAGAAACACTTGTGGTGGTGGTATATGAAGCAAACCCCACCTCAGAGCTTACCATGGATTTGTCGTCAATGCTGGCAGGAGTTGTCAtcttttcatacattttatatGAAGGTAGAAAAAGTGCATAAACAATATAACCTCAAGAAGTGGCCGGTTTTTATAGGACTTACTGAGGAAAGAGAATGTATTGCTGATACAAGGATATTAATAAAAGAAGAATTTAAGACAATAGACAGCAGTCTAGAAACACTGAATGAAGACCTGGTGCCTTTAGTCAAATTTACAAGAAGTGAGAAAAATTTGCAATCATTAGTAATATctgaaaatatagaaataaatgttaaagatgAACATTTACTTAGTAGTACCGATGGTGTACAGCAGAATGCTAAAGATGAGCTATTAATGGAAGAAATTAGCAATTGTGGTGATAGCAACTCGATAGATATTTGGGAGACCTTTAACAATTTGGATCAGAATGATGTTAAGAACTATAAAAAGTCAACTAATGCGAAAAAAGAAAAGTCTAAAAAAGTCCCAATTAAAGCAAGGAAAGTTCAAAGAGAATGTGCTAAAATCCCAAAGAACCAAACAACTGAATCTAAAAATGCTGATTCTTCAGCAAAACTAGAAATTACCCGAAAAAACGATGAATATTTGGCACAGAGtgaatataaacttttttgtcATCTTTGCAACATTCCCCTCAACGATTTTTTAAATCTCAAAACACATTACCGATTGGAGCACAAAATACCTGGCTATGCCATgtgttgtaataaaaaattttacaatcgAGGACCACTGGCCGATCATTTAAGGGTACACGAGAatccaaattattttaaatgtacgCTTTGTGGTCGAATTTTAGCTCATCGCATGAGTTACGAAAATCATCTTGAATTTCACAAACAATCTAATGAAACGCGCGAAAGAATCTTTAGCTGTGAGAAATGTGATAAATCGTTTTTCAAAAAAGCCGTCTATGATCGTCACATTTTGTCACATGTACCTGATGAAGAACGAAAATTTCAATGTGATGAATGCGATAAAAAATTTGCTGCCGAATATTTGGTTACCCAGCATAAAGCGTTTGCTCATCTAAACAAATATGGGAAGATATGCGATATTTGTGGTAAATCATTTCGTGAACGTTTCTCCTTTATGCGCCATATGGATGAACACAGCGGTGCACCACCTTCGAAAGTACCCTGTGATATATGCGGCGTTGAATTGACCAGTAAATATCTGTTGAATCGTCACAAGAAAAAAATGCATACCAAGGAAAATCAACAAGAACAAATATGCCCTTACTGTTCGAAGGTATCACCCAATATGCATGCTCACCGTCAACATATAAACTATGCCCATACCATGGAGCGTAAACATGCTTGCAACATGTGCGAGAAGAAATTCAAACGTCCGCTAGAATTGAAGGAGCACTTAAGTACGCATACCGGGGAGCCATTGTATACTTGTTCCCACTGTCCCCGCACATTTATATCCAGTGCGAATATGCATAAACACCGCAAAGCAGCGCATCCCAAGGAATGGAAGGAAGcaagattaaaaaaattaaccgcTCAAAAATTAAGAGAATTATCGATCAAAGAACATTTAAATGCTAGCACTAAATCAATTGCAATAGCATCTAACCTGCAAAGTTCACAGGATAATTCTATGTTAACACAATTAAAGgtgttgaattaa
Protein Sequence: MDNCVVCLSTNADIFSRINFQSSEWQECSIQRIIEKHLWWWYMKQTPPQSLPWICRQCWQELSSFHTFYMKVEKVHKQYNLKKWPVFIGLTEERECIADTRILIKEEFKTIDSSLETLNEDLVPLVKFTRSEKNLQSLVISENIEINVKDEHLLSSTDGVQQNAKDELLMEEISNCGDSNSIDIWETFNNLDQNDVKNYKKSTNAKKEKSKKVPIKARKVQRECAKIPKNQTTESKNADSSAKLEITRKNDEYLAQSEYKLFCHLCNIPLNDFLNLKTHYRLEHKIPGYAMCCNKKFYNRGPLADHLRVHENPNYFKCTLCGRILAHRMSYENHLEFHKQSNETRERIFSCEKCDKSFFKKAVYDRHILSHVPDEERKFQCDECDKKFAAEYLVTQHKAFAHLNKYGKICDICGKSFRERFSFMRHMDEHSGAPPSKVPCDICGVELTSKYLLNRHKKKMHTKENQQEQICPYCSKVSPNMHAHRQHINYAHTMERKHACNMCEKKFKRPLELKEHLSTHTGEPLYTCSHCPRTFISSANMHKHRKAAHPKEWKEARLKKLTAQKLRELSIKEHLNASTKSIAIASNLQSSQDNSMLTQLKVLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260063;
90% Identity: iTF_00260063;
80% Identity: -