Basic Information

Gene Symbol
TRERF1
Assembly
GCA_958450345.1
Location
OY288232.1:155452192-155470987[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-10 4.9e-07 30.7 0.3 3 45 1772 1814 1772 1815 0.94

Sequence Information

Coding Sequence
ATGTGTAGTGCGTCGGTGGGCACAGAAGCTTCGGTAACATTACAATTGCGCGATGTTAATTCCAATGACTCAATACAATCCAATCAATCATCATCAGAAGCAGCCGCCGCAGCAGCAACAATTATTACAACGTCTACGAACAGCCATCACCATACAGGCGGAACAGGAACAACAGCCACAACGACGACGACGACAACAACATTGGATAATGCATTAACCATTGGTTATCCAGATCCAGAAATGTTGGCTGATGTTTTAGGTACATTACAAACAGCATctcttaaaaatacaaatcccAGTGGTGAGAGTACAAAACATAATTCCTCCAAATTAACAAATACCAGCgatataataaataacaatttaaatggTACGATTAAAAATCGTATAACAATTAGTAAACGATCCTCGAATATAATCAACAATTCCCAAAATACCAGCAGCAataaccacaacaacaacaacattatcaatcacaataataacaacagccACATTAGCAATAACAACATCAACAATTGTCTTCGTGATATTTCCAAAACGACAAGCACATCAGCGGTACAAACGGTAACGACATCAACGAATACTACAACCGCTGTTAATAAAACCAATAGTTATATTAAGAATTGTCTAATACGTAGCAGCAGTTGCAGCAATACTACCAACATAACATCACTGGCTCAGATAATGAGCAATAGTAGTAATAGCAGCAACACCACCAACAATGCCCATAGCAACAATAgcaatattaataataacaataacaataatcaaATCAATAATAGCTCAACTATCAGCTGCAAcggtattaataataataataacaataacaacggTAGCAATACAAATTTAAGCCAACTTAACACTAACAACACaaccagcagcagcaacaatagtTGCAATAGCAATTTCAGCTCAAGCAGTAACGACAGTTGTTTCAGTTATAGCAGCAATAGCAGTAGCGGCAACTCGGTTGCCCGTAGCATAACATCGTTGAGTCACGGTAGCCGCAAAGTTCCTGGTCCATTAACAACAAATCCaccgaaaatattaaaaaagagcCGTTCAAAAATATCATCGCCCAGTCGTCACGGACCCCAGCAGTGTCAGatttgtaataaaatttttggaaatgcaTCAGCGCTGGCCAAACATAAACTGACGCACAGTGACGAACGGAAATACGTGTGTGTTATGTGCTCAAAGGCATTTAAGCGACAAGATCATTTAAATGGACATATGATGACACATAGAAATAAAAAACCATATGAATGTAAAGCTGAAGGTTGTGGCAAATCGTATTGTGATGCTCGTTCATTAAGAAGACATACGGAAAATCATCACGCCGGTATAATTGCACCACACAATCATCAACTGTTAATATCCAATAACAATTCCAATTCAAATTTAAGTTTATCCCCAGCCACAGCAAATGGAGACGCCAGTTCACCAGATGGTGCCACCTGTTTAGGCACATATCTTTCAAATGGCGGTACAGTCGTAGATGCAGCCACTGGTTTAGCTTTGACAGAAGAAGAACTTAAAGCCTTGAATGTGCCCCTTAAGACAGGCGTAACTTTGTTATCACCCACCTCGACTACATCCTCCATGTCGTCCTCTAGTACAATGTCGAACGGTCCGGGTGCAACCATAACTTTGACCGACAATAGTGGTAATTTGGAAGGAGAAGGTTTGACACGCGAACAATTGGATTTGATAAGTAAAATAATGAGACAAACTAAACAAACCACAGCTCAAGTGACAGTATCTTCGCCTACCAGTAGTCAATCATATAAAATTGATACCAATCCCCCAGCAACGGCCCAGacacaaacacaaacaaattccCGACCCAGAACCTGGAATATGCAATTGCTAAATTCCTCTCAAAATGTTGCCATTACCGTTGATGAGCTCAATGCCGAAAATATCAATGATTCCCCCAACAATGCTCAATCAAAACTTAAGGAGGATGAAATTGAAATAGATTTATCCAATAGCATGAATTCCAATCTCTTCAATTTGGTTAAAATTGATCAGAAACCAGTAGAGTGTAATTTATGCCAtcgcaaatttaaaaatgtacccGCCCTTAATGGTCATATGCGTTTACATGGCGGCTATTTCAAAAAGGATCCGGAAACCAAAAAGAGTGAGAAGAAGGAGAATAGTGGTCCCCCCTTGCAGACGGCCAGTATTGGTGTAAGAGCCTTGATTGAGGAGAAGATTATAAACAAACGAAGTAAAGATTTGAATAAGGGTGCCTTTGTAGTCCCCGCACCGCCCACAAATAGTACCCAAAATAATACAACTACCATACGTAGATCCATTAGTGATTTGGATAGTTTCCTTAATCCCAAGACACAACCGAACAGTACAACTAcaacaaatcaacaaaattccacacaacaacaacagcagcaacaacaattacCTGCGGCTACAACTATTAAACATAATCCAAAGTCCAATATCAATGTACAAGACATTAACTTGCCACAAAGTATCGAAATCTATAGTACtaagcaacagcagcagcatcagcatcagcaacagcaacaaaagaCAATGAATAATATTGGGGTGGGTACCACAACCAACACCCTAAATGCCGAACGTATTGCAAcgaaaacaactacaacaacagcagcaacgaTTAATACAACGACAACACGAAGCACATCAACCGATCCAAAAGATTCGACTCTGATCGAATTACTAAAACGGGGCACTCGCATAGCAGTCACCCAGAAACCGCCAAACAACAACACACCCTTGGGTGGTGTAACCCGCCAgattataacaaataaaaataattgtagtGTCATTATACCCTCGGAAGTCCAGGTGCTGTCGACCAAGGGAAAGCTTAAGAAAGACGAACACATACAAATGTCAAATTCCACTAATGTTACCCTGCCCGATGGCACTCCTTTATCGTTGACTATTGCCCAAGGGGCTGATAGTAACAGTGAAGTATATACGGTCACCTACACGAGTGATGGTTCGGCTTTATTTGGTGAAAACGAGGTTTATAATGTTAGTGAAGCCGAGATGTTGTTACAAACTGTCGATACCATGCAATTATTGAGTGATGCTGGAGACAATTTAAAACCTGAACATTCCGAACAATTTGAGGTCATGgataataaaatgaatgatATTGAGCAGCAAAATTGTGTGGATCAGCAGCAACACCAACAGCAGCTTCATCAGCAGCACCAGCAACATCAGCAGCAACACCACCACCAACAGTTGCAACAGAACTCAAATCAGTGTCAAACTACACAAACTTTACCAAACTTCCAACATTTCCATTCCAAAGAATTAATCATACAAAATCCAACTTTGATCAACCACCAGCAGATTAGAACAAATACCTTGTCCTTGCCACaagatataaaaaatcaattcacCTCCAGCCTCAATTCACCCATACATTCACCTCTAGCTTATCCCACACCACCTTCAAGCCACGAAAATGTTACACAGACTTCCCCCTACATAGAGGACAATCATCACTTCAACGATGCACCAAATATCTTCTTCAGTGAGTCATTAATTTCCAACAATCATGCGGGAGAAACCGATAatgagaaaataatgaaattgaaaaGTGTGCTCGAAGATAATTCCTTCGATTCCAATATTAAAGTGGAAGATTTGCTAAATGGCACAGATCCCGATACGGAGTGTGATTTGCGTGAATTCGCAGAGGCAAATCTTTCCTTCCTCGATGAAGATCAAGAATTTCTAAACGACTCCCGTAATGCCACATCACCGCTATCCGAATCATTTTTCACTAGCGGTATAGGCACAGCCGAAGAGGTCAAAGAAGTGTTGCGTGAAGTTTTAACCGAAGATCAACTCAATTTGAATTGTGAAAATCAGGGGGAGAATATAAttgatttatattatttacccGGTCTAAGTTTACAATCACAAATGATGCCCAATTCCGAAGATCCTCTATTGTCGTCTTCACCACGAGATTTTGGgcagcaacaaaaaatacaaaatcccTTGccccaacagcaacaacagacTCAGCAGCCACAACAGCAgctgcagcaacaacaacaaatccaACACATTCCTCATCAACAACCACAACAGCAACATCAAAATCAACAGCATAATATTCAATACAACAATCAGCAGCAGCTGGCACATCCAAACCAAACAGTTAAAATATCCTTGGATTCGAATACACAAACATCTTCTGGTTCAGCTACTTCCTCCTCCGAAATAAATCAATTGATTTTGAATATACCCTCAAATGTAATACAGAATTCCTGCAATCCAACCTCTGCAAATTCCTCCTCTACAACAACTACTATACACTATAATGTACAAAATTTACCACAAGTACAAAATCAATCTAATAGTCAGctacagcaacagcagcagtcGCATCTtatgcaacagcagcagcaacaacaacatcagtcACAATTTCTGACATCCACAACCATAAACTCACTTAATGAGGCCTTAATGCAGCCTATAATATACACTAGTGGTACCACCGATAAAATGGAACTAAAATTAGACAACAACCCCAACTCTACTAACCcacaattacaaaatattattcatCTCAATAAACCCCTGGAGATGGTGAAAAatacaacatcatcatcatcgagCCATATAATATTTCCACAGCAAAGTCACTCCTCGAATTCCATTGCCTCGAACCCAACTGTAACCACCTCTCTACAGCCGCTGTCAAATCAAACTAACTCTATTTTGAAAAGACGTTTGAAAGGTCATTCCTCGTTAGACTCTACGTCTTCACATTCTTCTTATTCCAAATATCAAGCATTGTCGCCCTACAAATCAAAACTACGCAAACCTTCACGTACCCATTACACACCAGCTCCCATACTGAATCCCGAACGCAAAGGTCACGGTTTGTACTGCAATGTTTTGAAGCAATTGGGCTGTTCTCTCTTGACCTTCGATAATTTCGATGATGATTTCGACGATCCCGTGGGTTTGGTCGATTTCTCCGATGAATCAAAAGTAAATTTAGGTTCAGCCTACCAAGCCGCTATACCTGCATTTAATGAAAACGCCTGTTCCAGTTCGGCTATAGAGGAAACGATTGGTTGTGATCTGATGTGGGATCCGGAAGTCCAAAAGGATGATAAGATTTTAATGAGATTCATCGACTTGAGTAAATCTTCAGCCGTACCCTTGGGCAGTCATTCTGAGGAGGTTGCCTTACAGGCCTTGCTAAAGGCCCAGGGTAACACAGCAACAGCTGTTTTGAGTTTATTACAGACCCAATCGAACTCATTCCAAATAAAATGGTCTTCACATGAGTTGGAGATATTTCTGAAGGGTTTGGAGAAGCACGGGAAGGAGTTTAGTAAAATTTCAAAAGAGCTCGGTTCAAAAACCACTGGAGAATGTGTACAAATGTATTATTTCTGGAAGAAATTATGTGTAGACTACAAGGTAACCCACCTAAAAACAGAAACACCACCACAAAATCATGCCAATGATCCCAAACCTTATGTATGCGAAATACCAGATTGTTCAGCgAGCTTTTCTTCTAAAGCAGCTCTGCATGGTCATACTCGCATCCATACTTATGGCCGCAACAGCCACAATAATCAACACAGTAATAATAATACGAATGCAACTGCAACAACTACTAATACTACCAATGCAAATTCCTCGCAAGGTTCTGCTACCAATAGTAATAATCATCCAATGCATAATAACACCCAGTCTATCCATACCAACACGGCGAATCCAAATCAAAAAGATACCAATGCCAATAAAGACAATACCGAATTCCCCTGCAAGGTGTGCGGCAAagTATTCAATAAAATTAAGAGTCGTAGTGCCCATATGAAGACCCATCGTGCAACAGATAATGAAACAACTGTacaaattacaaataatcaaaatcaaataatacaacaacaacaacaacagcagcagcagcagcagcaaccacaacagcaacaaacacaacaattataa
Protein Sequence
MCSASVGTEASVTLQLRDVNSNDSIQSNQSSSEAAAAAATIITTSTNSHHHTGGTGTTATTTTTTTTLDNALTIGYPDPEMLADVLGTLQTASLKNTNPSGESTKHNSSKLTNTSDIINNNLNGTIKNRITISKRSSNIINNSQNTSSNNHNNNNIINHNNNNSHISNNNINNCLRDISKTTSTSAVQTVTTSTNTTTAVNKTNSYIKNCLIRSSSCSNTTNITSLAQIMSNSSNSSNTTNNAHSNNSNINNNNNNNQINNSSTISCNGINNNNNNNNGSNTNLSQLNTNNTTSSSNNSCNSNFSSSSNDSCFSYSSNSSSGNSVARSITSLSHGSRKVPGPLTTNPPKILKKSRSKISSPSRHGPQQCQICNKIFGNASALAKHKLTHSDERKYVCVMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHAGIIAPHNHQLLISNNNSNSNLSLSPATANGDASSPDGATCLGTYLSNGGTVVDAATGLALTEEELKALNVPLKTGVTLLSPTSTTSSMSSSSTMSNGPGATITLTDNSGNLEGEGLTREQLDLISKIMRQTKQTTAQVTVSSPTSSQSYKIDTNPPATAQTQTQTNSRPRTWNMQLLNSSQNVAITVDELNAENINDSPNNAQSKLKEDEIEIDLSNSMNSNLFNLVKIDQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKDPETKKSEKKENSGPPLQTASIGVRALIEEKIINKRSKDLNKGAFVVPAPPTNSTQNNTTTIRRSISDLDSFLNPKTQPNSTTTTNQQNSTQQQQQQQQLPAATTIKHNPKSNINVQDINLPQSIEIYSTKQQQQHQHQQQQQKTMNNIGVGTTTNTLNAERIATKTTTTTAATINTTTTRSTSTDPKDSTLIELLKRGTRIAVTQKPPNNNTPLGGVTRQIITNKNNCSVIIPSEVQVLSTKGKLKKDEHIQMSNSTNVTLPDGTPLSLTIAQGADSNSEVYTVTYTSDGSALFGENEVYNVSEAEMLLQTVDTMQLLSDAGDNLKPEHSEQFEVMDNKMNDIEQQNCVDQQQHQQQLHQQHQQHQQQHHHQQLQQNSNQCQTTQTLPNFQHFHSKELIIQNPTLINHQQIRTNTLSLPQDIKNQFTSSLNSPIHSPLAYPTPPSSHENVTQTSPYIEDNHHFNDAPNIFFSESLISNNHAGETDNEKIMKLKSVLEDNSFDSNIKVEDLLNGTDPDTECDLREFAEANLSFLDEDQEFLNDSRNATSPLSESFFTSGIGTAEEVKEVLREVLTEDQLNLNCENQGENIIDLYYLPGLSLQSQMMPNSEDPLLSSSPRDFGQQQKIQNPLPQQQQQTQQPQQQLQQQQQIQHIPHQQPQQQHQNQQHNIQYNNQQQLAHPNQTVKISLDSNTQTSSGSATSSSEINQLILNIPSNVIQNSCNPTSANSSSTTTTIHYNVQNLPQVQNQSNSQLQQQQQSHLMQQQQQQQHQSQFLTSTTINSLNEALMQPIIYTSGTTDKMELKLDNNPNSTNPQLQNIIHLNKPLEMVKNTTSSSSSHIIFPQQSHSSNSIASNPTVTTSLQPLSNQTNSILKRRLKGHSSLDSTSSHSSYSKYQALSPYKSKLRKPSRTHYTPAPILNPERKGHGLYCNVLKQLGCSLLTFDNFDDDFDDPVGLVDFSDESKVNLGSAYQAAIPAFNENACSSSAIEETIGCDLMWDPEVQKDDKILMRFIDLSKSSAVPLGSHSEEVALQALLKAQGNTATAVLSLLQTQSNSFQIKWSSHELEIFLKGLEKHGKEFSKISKELGSKTTGECVQMYYFWKKLCVDYKVTHLKTETPPQNHANDPKPYVCEIPDCSASFSSKAALHGHTRIHTYGRNSHNNQHSNNNTNATATTTNTTNANSSQGSATNSNNHPMHNNTQSIHTNTANPNQKDTNANKDNTEFPCKVCGKVFNKIKSRSAHMKTHRATDNETTVQITNNQNQIIQQQQQQQQQQQQPQQQQTQQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00921633;
90% Identity
iTF_00260192;
80% Identity
iTF_00259248;