Cvic000809.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- SMARCC2
- Assembly
- GCA_958450345.1
- Location
- OY288232.1:5158358-5162407[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-14 2.9e-11 44.2 0.2 3 44 651 692 649 694 0.95
Sequence Information
- Coding Sequence
- atgtgTACTTTAGCACCCAAAAAGGATGGCAgtccaaatattgaattttataactcGCCTGAATCATTACAGGGCTTCGAGTCCATACGCCTATGGCTacagaaaaattgtaaaaaatatttagcCAGTAGTAATGAGCCTATAACAAAAGAATCGTTGGCTCAATTATTGATACAATTTCTCCAATATGTTGAAGCAAAACTTGGTAAAAATTCAGCAGAGCCACCAGCGACGCGTATACCGATGCgttgttttttggattttaaatcgGGCGGTGGTTTGTGTATTATATTTTCGACAATGTTTCGCTTTCGCGCTGAGCAGAGAGGCAAGAAGTTTGACTTTTCCGTGGGAAAGAATCCAACTCGCAAAGATCCAAATATACAATTGTTAATTGACATCGAACAAGCTTTAGTCGAAGCAGACCTTTATCGTATTCCGTACATTTTTATTCGTCCCGAAGTGGATAAGCAATTGGCCACACGTTTGCGTGAAATATTGGCTACTAGACGAGTAGAAATTGTTTCGGATGAAGAAGATGCCACTCATATTATATACCCTGTGGTTGATCCTCATCCCGATGAGTATGCTCGTCCTATTTTTAAGCGTGGAAATTGTGTAATGATGCATTGGTATTATTTCCCCGAATCGTATGATACATGGACACCAAATTCATTGGAATTGCCCGAAAATGTACCAGAAAATCCGGAATCTCCAGCAGAGCGCTGGCGTGTATCCGCCTCATGGATTTTAGATCTCGAGCAGTACAATGAGTGGATGGCAGAGGAGGATTATGAAGTAGATGatttgggaaaaaagaaaatGCATAAGCAGCGTTTATCCATTGATGACATAATGTCCGGTGGAATtgatgaaaagaaaaaagtagtgAGCGGTACTCCAGTTGCTGTAAAACAAAAGCGTAGACGTTCTCCATCTCCGAGTTCTTCTAAATCCGGAAAGCGTAAACGGTCTCCAGCAGTACTGCATAAAAAGTCACGCAATGATGAAGAAGATGAAGATTTAACACGTGACATGGATGATCCGCCTGCCGAAACAAATCTTCAGGAAGTTATTAAGACCACTTCCCTTCAATCCACAGCCAGTCCAGCTCCCGCAAGCAAGTCCAGAGCTGATAATGATATGATGCCAATTAAAGGCGGTACTTTAACTGATTTGGATGATGAGATGACTGGTGGTAGCGGCACTCAAGCTTTGTCGGCATGTGATGGTGAAAATTCTCAGACTGGAAAAACCAGTGAGAATAGTAATACTCAAGAATTTTCATCATCGGCCAAAGAGGACATGGAGGATAATGTTACTGAGCAGACACATCATATTATCGTGCCCTCCTATTCAGCTTGGTTTGATTACAATTCCATACATGTGATTGAGAAACGGGCAATGCCGGAATTctttaattctaaaaataaatccaaAACGCCAGAGATTTATATGGCCTACAGAAATTTCATGATTGATACATACCGTCTCAATCCCACTGAATATTTAACAAGCACAGCCTGCAGACGTAATTTGGCTGGCGATGTTTGCGCGATTATGCGTGTCCATGCTTTCCTCGAACAATGGGGCTTGATAAATTATCAAATTGATGCAGAGTTACGTCCCACTCCCATGGGGCCACCACCTACATCTCATTTTCATATTCTGTCGGATACACCTTCAGGCATACAGTCTTTAAATCCGCAAAAAACTCAACAGCCATCGGCTGCAAAATCCTTACTCGACCTTGACAAAAAGCCCTCAGGTGGTCCCAGCAAGGAGGGCAAAGAAGATTCATTGGATAAGGCCCCAGTGGGCATAAAAACTGAACCGGTGGAAAATGGTAGTGCAGCTGCCACTGCCTCTGGTCAATTTGGTTTAAAACTCGATCAGTACGCTAAAAAGCCGGCAGCTATGAAAAATCGCACTGCTGCTAGTCTGTCCAGGGAATGGACAGACCAAGAAACTCTACTTTTATTGGAAGGCTTAGAATTGCATAAGGATGATTGGAATAAAGTTTGCGAACATGTGGGAACACGCACTCAAGATGAGTGTATTTTACATTTCCTACGTCTACCAATCGAAGATCCCTATCTGGAAGACGATGGTGGATTTTTGGGTCCTCTAGGCTGCCAGCCTATACCGTTCAGCAAATCCGGCAATCCCATCATGTCTACAGTGGCATTTTTAGCATCTGTAGTAGATCCACGTGTAGCTGCAGCAGCTGCTAAAGCAGCTATGGAAGAATTTGCAGCTATTAAAGATGAAGTGCCAGCAGCAATTATGGACAGTCATCtgaaaaacattgaaaaagcTTCAGCATCTGGAAAATTCAATCCATCTCATGGCTTGATTAGTAGTGGTATTGCCGGTACGAGTATTGACAAAGACGAAGAAGATCCTAATGCCGCAACTGTAGGTGTCGTACCTCCATCTGGATCGGCCGACGAGGAAATGAAGGACCTAACCAAGAAAGACGATAAAGATCTTACCAAATCCCCCTCCAAATCCAAAGACGAATCTAAAGACAATGATAAAAAAGATGATAAAGAAAAGACAGAAAAAGAAACCGATAGTAAAAAAGATGAAAatgtcAGTGGAATGGATGTCAAGGAAATTAAAACCGAAGAATCTAGTGGTGATGGTTCTGCAGGTGAAGGTGTCTCAAAAGAAATCGATGTAGCTAAACAAGTATTTAATGAGGCGAATGTACAAACCGCTGCTGCTGCCGCTTTAGCTTCAGCTGCGGTTAAAGCAAAGCACTTGGCTGCtttagaagaaagaaaaattaagtcaTTGGTTGCCCTGCTGGTGGAAACCCAAatgaaaaaacttgaaattaaattgCGTCACTTCGAGGAGTTGGAAACCACAATGGAACGTGAGCGAGAGGGTTTGGAATATCAAAGGCAACAACTCATTACGGAACGCCAACAATTCCATCTAGAGCAATTGAAGGCAGCTGAGTTTAGGGCCAGACAACAGGCTCACCATCGTCTCCAACAGGAACAGCAATGGCAAGGTGGCCCAGCAGGCACTGGAACTGCCGCGGGTACAGCTGCCTCAGCTACAAGTGGCGCTACTTCGGGTTCAACTGTGACTCCGAGTAGCACCTTGCCCGGAGCACCACCTGTTGTTCCACAAATAGGTCCAAGTGCTACTATGCCAGGAGCCCCCGTTGCAGCGCCATCAACACATGTTGGAGCACCAGGTGCTAATCCAGCAAGTGGTTCAGTAGCTGGTGGCCATCCTGCTATACAAACCACTACACCAATGGATACTACTCCAGCTGCTATTGCACAAACTGTTCCAACAACAGCTTCAGAAGCACCAGCTGCATCTCCAACCTCGGGGTCCACCATACCACCTGCAAATCCCTCAGTTCCGTTAGCTACAAATGTAGCTGGTCCTGTTCAACCCACACCTAACATTCCACCGGCCCCAGGAGGTCCCACAGGTGCTCCCACATCATCTTAA
- Protein Sequence
- MCTLAPKKDGSPNIEFYNSPESLQGFESIRLWLQKNCKKYLASSNEPITKESLAQLLIQFLQYVEAKLGKNSAEPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSVGKNPTRKDPNIQLLIDIEQALVEADLYRIPYIFIRPEVDKQLATRLREILATRRVEIVSDEEDATHIIYPVVDPHPDEYARPIFKRGNCVMMHWYYFPESYDTWTPNSLELPENVPENPESPAERWRVSASWILDLEQYNEWMAEEDYEVDDLGKKKMHKQRLSIDDIMSGGIDEKKKVVSGTPVAVKQKRRRSPSPSSSKSGKRKRSPAVLHKKSRNDEEDEDLTRDMDDPPAETNLQEVIKTTSLQSTASPAPASKSRADNDMMPIKGGTLTDLDDEMTGGSGTQALSACDGENSQTGKTSENSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGIQSLNPQKTQQPSAAKSLLDLDKKPSGGPSKEGKEDSLDKAPVGIKTEPVENGSAAATASGQFGLKLDQYAKKPAAMKNRTAASLSREWTDQETLLLLEGLELHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPAAIMDSHLKNIEKASASGKFNPSHGLISSGIAGTSIDKDEEDPNAATVGVVPPSGSADEEMKDLTKKDDKDLTKSPSKSKDESKDNDKKDDKEKTEKETDSKKDENVSGMDVKEIKTEESSGDGSAGEGVSKEIDVAKQVFNEANVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGGPAGTGTAAGTAASATSGATSGSTVTPSSTLPGAPPVVPQIGPSATMPGAPVAAPSTHVGAPGANPASGSVAGGHPAIQTTTPMDTTPAAIAQTVPTTASEAPAASPTSGSTIPPANPSVPLATNVAGPVQPTPNIPPAPGGPTGAPTSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314595;
- 90% Identity
- iTF_00331456;
- 80% Identity
- -