Cvic023782.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- RCOR3
- Assembly
- GCA_958450345.1
- Location
- OY288235.1:82035508-82047772[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.7e-10 1.1e-06 29.6 0.0 3 46 58 101 56 101 0.97 2 3 1.7 2.3e+03 -0.2 0.3 32 44 254 266 246 267 0.73 3 3 1.1e-12 1.5e-09 38.8 0.0 3 46 366 409 365 409 0.98
Sequence Information
- Coding Sequence
- ATGGTACGACAGGAACTTCAACATTCCACATTGTTAGTTGAGGAATACATATCAGTTGCCAAAGAGAAATATGGTTACAATGGTGAACAGGCGCTGGGTATGTTGTTTTGGCACAAACATGATTTAGAAAGAGCTGTAATGGATTTGGCAAACTTTACACCATTTCCCGATGAATGGACTGTCGAagataaagtactttttgagcAAGCATTTCAGTTTCATGGCAAAAGTTTCAATCGTATACGTCAAATGTTACCCGATAAATCAATAGCCAGCTTGGTTAAATATTACTATTCATGGAAAAAGACAAGACATCGTCAAAGTGTTATGGATCGTCAGGAGAAAATAAAAGCCAACAAAGAGGGTGGTTCTTCAGAAAACGGTAGCGACAATGGCAGCAATGAAGAATCCGACAATGATGATAAGGAACAAACATTGTCATCATTACAAGCAGTAAATTTAATTGATCAAACAAACGATGGTGCCGCCGCCAATTATAATATGGCTGGCCACAGTGGTGAAGGTGGCATCGAACACGAATCGAATCACATTTCAAACAATATTGCCAATAAATCCCAACTGCTCTCTATAAATCCGTCCCACATGAATAACGATTCCATTAACTCGAATGGCATACAAAATGTCACCAATACAAATAATACATCGTCTATGACTTCCAACTCCTCCTCCTCTACCAGTGCCGCCGGCTATTGTTCGAATTGTGGTGTGGCCTGTAATATATTGAATAATTCGCCACACGGTAAACTTTGTTCCAGTTGCCATCATCATTGGAGACGCACTGGCAATAAACGTCCCACTTCGGGTCCGTATTTTAGCAAAAGATCTCGTGACCGCAATGCTGAACGCCATAAACGCAAGCCGCCACGTGGCATGTACATTAATCATGATGATATTGTGGCTCTGGCCAGTGCAAATGATAATCAAGATGAGTTACTGGCAAATATTGATCGTGAAATTGTCTCCCTATTAAGTCAAGTACAGTTGAATAAGCAAAATATCTCCGCATTAAAACGTAAAAACTCTGATAATTTGGAAGAGATACGTCCAAATGAAATTACAAATCGCATTAATGCACGATGGACTaatgatgaaattttattaGCTGTACAGGGAGTACGAAAGTATGGAAAAGATTTTCAAGCAATTGCTGAAACTCTGGGCACCAAAACAGAAGCACatgtaaaaacattttatgtaaattatcgTCGTCGCTATAATCTAGATCAAATCATTAAGAAATTTGAGGCCGAAAAAGAAGTTAATGCTCCAGCCACATCGGCTAATACTAcctcatcgtcatcatcattatcTCTGAATGCCGCCAATAGTACCTCCACAAATGCTGAGCCAATAATTGTTGGAAGTGGTGGTGGGGGCGTCAGCAGCAATTGCAGTGTAAAAAAATATGACTCAGTCACAGCCAGTACCAGCAGCAGTAGCACTctattaaaaaagaaagaaatcgtACCTAATAGTGTTAATGAAGAATCGGATAATACAACATCGAGTGAAACTGCTATTTCTAAATCAACGATTTCCACAATCACCACTACCACTGATGAGCGTAAAAGTGAAAGCAGTTTGAGTGGCTTAATCCCTATAAAAGATAATATTATATTGGAGAACTGCCGCTTTTGGAGCGATGATAATCCTCAAGCACTTGTCGAAACACCATCTCTGTTTCTTTACAGAATCATTGGTTCATGCATGCTTACTAACTTTTGCGTTCCACAAATGGAAGGCATTAGTATTGCAGCCATGTGGTTTCAGCAGTATGGTGCCACATCTCACACAGCGAGTGTTACAATCAATTTACTGAGAGAAACATTTGGCAAACGAATGATGGAATTGTTAAATGACCACCTCACCTCGTTCATGTGA
- Protein Sequence
- MVRQELQHSTLLVEEYISVAKEKYGYNGEQALGMLFWHKHDLERAVMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFNRIRQMLPDKSIASLVKYYYSWKKTRHRQSVMDRQEKIKANKEGGSSENGSDNGSNEESDNDDKEQTLSSLQAVNLIDQTNDGAAANYNMAGHSGEGGIEHESNHISNNIANKSQLLSINPSHMNNDSINSNGIQNVTNTNNTSSMTSNSSSSTSAAGYCSNCGVACNILNNSPHGKLCSSCHHHWRRTGNKRPTSGPYFSKRSRDRNAERHKRKPPRGMYINHDDIVALASANDNQDELLANIDREIVSLLSQVQLNKQNISALKRKNSDNLEEIRPNEITNRINARWTNDEILLAVQGVRKYGKDFQAIAETLGTKTEAHVKTFYVNYRRRYNLDQIIKKFEAEKEVNAPATSANTTSSSSSLSLNAANSTSTNAEPIIVGSGGGGVSSNCSVKKYDSVTASTSSSSTLLKKKEIVPNSVNEESDNTTSSETAISKSTISTITTTTDERKSESSLSGLIPIKDNIILENCRFWSDDNPQALVETPSLFLYRIIGSCMLTNFCVPQMEGISIAAMWFQQYGATSHTASVTINLLRETFGKRMMELLNDHLTSFM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00259703;
- 90% Identity
- -
- 80% Identity
- -