Cvic000842.2
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- -
- Assembly
- GCA_958450345.1
- Location
- OY288232.1:6578123-6580617[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.6e-09 7.7e-06 26.9 0.1 1 45 205 250 205 251 0.95 2 4 4.4e-05 0.06 14.4 0.1 3 43 261 305 259 308 0.86 3 4 1.2e-11 1.7e-08 35.4 0.0 2 46 316 361 315 361 0.93 4 4 2.5e-05 0.035 15.2 0.0 1 45 367 413 367 414 0.92
Sequence Information
- Coding Sequence
- atGGCGACAAATACTAAtgaagaaatgaaaacaaaattggaaaaagcATTAATCCTGAATCGACAAATGCAAGGAGAACTACTAATCATGCGAGGAAAGCTAGAGAAGCTATTGTCAAATGTCAAAGACACCTATAAAATTAATGATATATTACTGAAGGAAGGCATTGTTAGACGACGAAAAAAGGGAATTGGAATAAAAGGAGCATATTTGAGAGGTGGAACGTTCTACTTAAAGGGAAATATGTTTTTCAAAGATATAAATTGTCGTAATTGTCCAAATAATCGAGATTATGAAACAAGAAAATTGGAAAACGAAATGTTTCCAATGGATTTGAACTTAAAATCGAGACATGTTTGGTCTACTGCTGATAAGCAAGGTGTTATATTGGGTATTAAGGAACAGataatCGATTACTTGTCAAAATCACCTAAGCGCCGTGGTGAGGAAAATAAAGAAGTAGATAGTGAGAAGTTGGCAAAACTTTTAAACATGGTTCCGAAAGATTTTCGCATCGATTGGGTTAATTTATCAAGTTATAATGTGCAGCATCGTCATTCGCCCAAAACATGTGAGGCtatttggaatttatttttacatccGTCTTTAAAGCGAACTGTCTGGTcgataaaagaaaatcataagcTTTTGGAAGCcgccaaaaaatatagttttcaaaattgGCAAGCTATAGCCAATGATGTAGGACAAAGATCAGATTTTCAGtgttttgttcaatataaaaattacgtCTGTCACATGTTGCCCGAATCTACAACAAAATGGTCTAAAGATGATGACAAACGACTGCTGGAAGTAATAgccaaaaataatgtaaatgggATTATTAATTGGAGCAATGTAAATGCGTACTTTCCACATAAAGCCAAAAACACGTTGCATACTCGCTATAATCACACGCTTAATCCGGACGTTCATGTTGGTGTCCCTTTTACTCCAGAAGAAGACCTGCTTTTAATAGCAGCTGTAAAAGAATATGGTACAAAATTCAACTGCATACCGCGTACCCTATTCCCAAATCGATCGCTGATACAATTACGTACTCATTATAATAACGTTCTATCTAAACGTCATAACCGACTTCCATGGTCTTTAGAGGATGACATTAAGTTAATGGATCTTGTGACAGTAAATGGTACTAAATCCTGGCTGGTATGTGAAAAATCGTTTAATGGAAAACATTCACGCATAAGTTGTCGCACACgatttttaactataaaaaagtatttggaAAAGAATCCTGATGCAGGCATTGATGACATTCCTAGAAAACAGATAAAATCAAGATGCGCTATCAACATCGAAAATTGGAAAGAAAAAGTTGAGGAACTGTCTGCAAATCCAGACGgtgtaaaattgaaaaaggaaaaatttcaaaaacaaaaaaacgataaacttcaaaacaaaaaacatgaaaaagtaAGAAAACCAAAACAgaatgcaattaaaaaaacaaaaaaagaaaagctTAAGACCGCTGTTAAAGAAGAAATCGAACCGATTGAGGCAATACTACCTAATGAAGAGAAAATTCAACCAGTTGaagaaaaattacaacaaatttcTGAAAACATACAATCAATTACAGAAAAtctacaaattataaaaaatgagGAAAAACGAATTAGAAAGTCCCAAGCAATACAgaagaaaataattgaaaagcCCTACATACCGCGATTACGAATGAATGGTataagaaattataatttttttaaatatgcctacaattttaatatgaaacaaCACCCCTGCGATAACATATTAATAAACAACGAGGATTTTACTATTGCAATGTCAGCTTTGAATCCCCAAATACCATTATCAAtagataattataaatttgataCCAGTATACCAGAGAATGTTAAACTAAATATAAGAAATAATCCACCACAACTatcaatttatgaaaaacttcaaCGTTTGCCTCCAAATTGGTCTACAGCCATGGGATTTCGGGCACTATGTATACACACAGCAACTAATTCGACTACCCAACCATCTGAGCATTTTGTGGACAACACAAACGattcaataacaaattttcGAGAACGTTTACGTTCAGTTTTCTACTCAACAGCGCTGCTAAGTCGTTTAAACCCTGACATGGTGGGTATTAAAATGGCTGAAACCCCAAAACCAAAAGTGGTCAAACGTAAACGATCTTATAGcaataaagttaatgaaaaaaatacaaataaaaaaaaatgtattgaaattatagaaaatataaaaactgaatttgaaacgtaa
- Protein Sequence
- MATNTNEEMKTKLEKALILNRQMQGELLIMRGKLEKLLSNVKDTYKINDILLKEGIVRRRKKGIGIKGAYLRGGTFYLKGNMFFKDINCRNCPNNRDYETRKLENEMFPMDLNLKSRHVWSTADKQGVILGIKEQIIDYLSKSPKRRGEENKEVDSEKLAKLLNMVPKDFRIDWVNLSSYNVQHRHSPKTCEAIWNLFLHPSLKRTVWSIKENHKLLEAAKKYSFQNWQAIANDVGQRSDFQCFVQYKNYVCHMLPESTTKWSKDDDKRLLEVIAKNNVNGIINWSNVNAYFPHKAKNTLHTRYNHTLNPDVHVGVPFTPEEDLLLIAAVKEYGTKFNCIPRTLFPNRSLIQLRTHYNNVLSKRHNRLPWSLEDDIKLMDLVTVNGTKSWLVCEKSFNGKHSRISCRTRFLTIKKYLEKNPDAGIDDIPRKQIKSRCAINIENWKEKVEELSANPDGVKLKKEKFQKQKNDKLQNKKHEKVRKPKQNAIKKTKKEKLKTAVKEEIEPIEAILPNEEKIQPVEEKLQQISENIQSITENLQIIKNEEKRIRKSQAIQKKIIEKPYIPRLRMNGIRNYNFFKYAYNFNMKQHPCDNILINNEDFTIAMSALNPQIPLSIDNYKFDTSIPENVKLNIRNNPPQLSIYEKLQRLPPNWSTAMGFRALCIHTATNSTTQPSEHFVDNTNDSITNFRERLRSVFYSTALLSRLNPDMVGIKMAETPKPKVVKRKRSYSNKVNEKNTNKKKCIEIIENIKTEFET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199809; iTF_00045288; iTF_00259701;
- 90% Identity
- iTF_00045288; iTF_00259701;
- 80% Identity
- -