Cvic026564.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- kn
- Assembly
- GCA_958450345.1
- Location
- OY288236.1:1496282-1499816[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-118 1.7e-114 384.3 0.0 205 385 1 210 1 212 0.99 2 2 5.6e-09 5e-05 22.8 12.7 422 505 213 304 210 314 0.70
Sequence Information
- Coding Sequence
- ATGCGTAGATTCCAGGTTGTCATAGCCACCCAAGTGAGCGTGGAGGGCCCTTTGTTGGCGATCTCGGATAATATGTTTGTGCACAATAACTCCAAGCATGGACGCAGAGCCAAACGTTTGGATACAACGGAAGGTACAGGCAATAACACTCTGTCCATAACGGGACATCCCTTAGCGCCTGACAGTACCTATGATGgcTTATATCCACCGCTGCCTGTAGCAACACCTTGTATTAAGGCTATATCACCGAGCGAAGGCTGGACTACTGGTGGTGCCACCGTTATCATTGTGGGTGATAATTTCTTTGATGGCCTACAGGTTGTGTTTGGCACAATGCTGGTATGGAGTGAGCTGATAACATCGCACGCCATACGTGTGCAAACACCGCCCAGACATATACCGGGTGTAGTCGAAGTAACCTTGTCCTACAAAAGTAAACAGTTTTGCAAAGGATCTCCCGGTcgttttgtttatgtttCAGCCCTTAATGAGCCCACCATTGATTATGGTTTCCAAAGGCTGCAGAAGTTAATACCACGTCATCCTGGCGATCCGGAAAAGCTGCAAAaggaaattattttgaaaagggCAGCCGATTTGGTGGAAGCCTTGTATTCCATGCCTAGATCGCCCGGCGGTTCGaccggcttcaattcgtatgctgGACAACTGGCAGTTAGTGTACAAGATGGTAGTGGCCAATGGACCGAAGACGACTATCAGAGAACACAGTCGAGCAGTGTTAGTCCACGAGGCGGTTATTGCAGCAGTGCTTCAACACCACATAGTTCGGGAGGCGGTTCTTATGGTGCTACGACTACGGCAGCTACAAATGGTTATGGTCCTACGCCAAATATGGGCACTTTGTCATCTTCACCCGGCAGTGTTTTCAATACCACATCAATGTCCTCAACCTGGCATCAGGCTCTGGTACAACATCATCACTCGCATCCACACCACTACCATCATCCGCATCAGCCTTGGCACAATCCAGCCGTTTCAGCAGCCACAGCGGCCGTTTAA
- Protein Sequence
- MRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNNTLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRTQSSSVSPRGGYCSSASTPHSSGGGSYGATTTAATNGYGPTPNMGTLSSSPGSVFNTTSMSSTWHQALVQHHHSHPHHYHHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01109082;
- 90% Identity
- iTF_01132709;
- 80% Identity
- -