Cvic017758.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Calliphora vicina
Gene Symbol
JARID2
Assembly
GCA_958450345.1
Location
OY288234.1:69957741-69969554[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-22 1.8e-18 67.7 0.0 6 89 1939 2020 1934 2020 0.92

Sequence Information

Coding Sequence
ATGGTGGTCTCCAAAGACTCCAAGCGTAAACGCAAGGAGTCGTCACCGCCAGCGACACCACAGCAACAATCTACAACGGCTGTAGAGTCATCACCAGAAATGCCCAAAAGGACAAAAGTTCAAGCTCAACGTAAGTTTGCACAAGGTCAAAGTGCACCACAATCATCATATAGTTCTATAATCGCAGCATCATCTTCATCTAATACTGGGCCAAGTACTTCATCAGAGAGTCGTGAACCACCAACCGAGATTTTGCCCAATAAACGGCCAAAGACAGaggattttttaacatttctatgtTTTCGTGGTTCCTCAGCTTTGCCACCGCACTTGGATTTTCTAAATCAGGGTAAAAGTAAAGAACCTGAAAGGCCAGTAAAAAAGCCAACTATTAAACCAGTGATTAAGAAGAAAGGAAAGAAAGGTCGACCACCGAAGAATGCTAAACAAAAAGAAGAGAATATCCCTGCTAAAGCAGAAGAGAgtgaagtaaataaaaaggtTGAAGTCGCTCCAGaagaaaatcaaacaaatacaaatgaaaatgaagaaaaaaataaaaatccggAAAAAGTACAAGTTGAAGTTGAAGAAAAGGAGGAGGAAGAAGAAGAGGAGGACGATAATGTACCGACTTTCGCTGTGCGTAAACGAGCAGAAGTTGTAGCCGATGGCAATCGTCGCAGTAATCGCAGTAACGCTGAAGAAAAGTGCAATAATTTTACAGAGACTTCAAAAAGACGATCAAATCGTGCAAGTACTAAAGGATCAAAAGTTATGCTTGACCATCTCTCAGATGAAGAAGACGACGAATACTTCTCAGCGGTCGATGAAAATAGCAAAGCTCTTAATTCGGATATAGATGGTAAAGAACGAAAAACTACAAAGACTCCTGTCAATTCAGAGAGAAAATCAGAAACTCCTTCAAAAGAAAGTGAAATGACAGGCAAATCTCGGAAAGGAAGGCCACCTTCAACCAACAAGAAAAAGGAAGTAGAAAGCTGCAAAGAGAACGAAAGAGAAGAATCtgtaaaatcagcaaaatcagaCATCAAAGAGAAGATTCCGGTGAAGCGTCCAAGGCAAAAGGAATCACCTATTTTTATACCTTCGCCGGAACCGTCCGGACGTATGACAAGACAAAGAGCTTTTTTTGAGCCCGTTAAGGTTCCTCATAGAGATAATGAAGACACCGAGGACGAAATCAACAAAGATGTTACGGAAGAAAGAGTTAAACccgaaactaaattaaaacccACAGAATCTGCTATTGATAAAATCAATGAACCATTAAAGATAAAGGCCGAAGATAAAGATGAAAAAACTATATCAAAACAACTGGTTGTCAATGATGATAAAAACAAACCGACACAATTAGATGTATTTGATTTTTCTTCCGACGATGAACAACCTTTAGCTAAAacgattaaattaaaaaagtctgGATTAAATAAATCAAGTCCTAAGAAAACAAACCCTCGTGGAAAAAAACCGTCACCGAAAAAGGAAACCATCGAAGAATCCAATAAGACCAATGAAAAAGAAGAACTTAAAACAGAACCGGAGGAAAGTGTTAAAAAAGATGCTGTAGCTACAGAAACCGTTATGTCTGCAATTGAAGACGAATCAAAACCGAAAGGAAAGCGTTTAAGTGGCCAAGCAGCAAAAAATTCGAAGAGGAAGGAAAATGAAGAAGGATTAAAAGATGTGGATAGGGAATCAACCCTAAATTCCCCGAAAAAGTCCAACGCAAGACAGTCTCGTAAGAAAACCAAAGCTGAAAGTAATGAAAACACTGCTGTTGAGAATGAGACAGAAGATAATCAAGGCAGTCCTACAAGAAATCAAAGGCCATCACGTAAAACGAAAGAAGCAGCTACTATATATATGGGCATAATAGGACATCGATTGCAAATGGCAGAGGACGATGATGACGACATTTCGTTAAGTAGTTTCGATCGGCCAAATGTCCGAGAAATGGAAAAGATGGAAAATGAACTCAAACGAAATACGTCGTCAGTAGGAAAAGGATCTCCACCGCCGAAGCAATCAAAATCAGCGGATATGCCACAACCAATAGCTCTTCCTATTGCAACTGCAGTTGCAGTAGAAACAAAACCAACCACAACAGGTCGCCGAGGTCGACCTCCTAAAAATCCTAAAATACAACCACTTGTACAGCCACCAAAACGTGAAATCGAAGGGATGCTCGTAAAGAAAGGCGCAattgcaaagttgactcaatcTACCGAAAACCTAGCTGAGGCCAAAGACAGCAAAACAGAACCCTCAAAAGCAGGTACGGAGGACGACGAAGACTTTCTGTTGAACGAGGAACTTAACGAAACCAAACGTAAACTTGAAAAAAGCTTCAGTGATTCCGATGACGAACCATTGGCAATAAAAGCTCACGTAAAGGCAGGTGATAAAGATGGAGAGGATTCTCGTAAGTCTGCAGGCGGTGTTGAGTGCCTATCTCCAACCACTTTACCAATAGTGAATCCTCCTGTGGCAACTGTTAGTGGATTGATAAGTCTCTCTATGCTACCTATAACTCCCAAATCTGTTACCACTATAAATAGCATACAAACTCAACCAACTCCACAACCAACACAAACGGCAGCAGTAACAACATGTGTGGTGCCGACTACAGCACTAGCAACATCTTCGGCAATTTCAGCACCAATGGCTGCGACAATACCATCACCAATAAGTTGTACTATTCAGCCACCAGCTCCAGTTACTCCTACATCACAATCTCCGTTTAAAACGATTGAAAAGAAGTCACCCATACCAACATCGAAGATTTTAAATGTGCCTGCAACTTATGGCATTCCCCCAGCCTCGCCCACAGGTAATATTGCAGCTggaattaatacaaatttcgGAAAATCGCCCATGTATGTACCACAATCTCCAGCCCACTATCATTCTCCACATCCATCACACATACGGCCAACTTCAAGTTTGCCACAATTTCCCGTGCAATCTGTGAAGAATCCCTCGCTTGTGGCACCTCCATCCAATACGGTCACTTCTCATCTGACTACTCCTCCATCACAAATGACAGCTCAGTCGCCAATAAAATATCAAACTCCTCCAACTACATATCCACCACCAATCGAGGCATACCCCTCGCCAAAAATCAATCCCAACTTTTTAACGCCCAAATTTGATCGCAATACTCTATCTCGTCCAGGAAATAGTACTGGAAATAATAATGCTTTTCCTTCACCTTCACCAGTGAAATTCGATATGTCCGGTTCAAGCAGTGGTCTACTAAAGAACTCATCACTTTCGGCACCGAATGTTCAAATGAGTCCTAAAACGCTAATATCCAGCAACATGAACTTTATGGGAAATAATCCAGCTGCTTCAACGACAGTTGCGGGACAGATTAGCAACGATCCGCTGAAGGATGAAATTGGCAGTATACTTGCGGCTAATTTAATGCCAAGCAAGGAAGAATCTGGCAAAATATTTGGTATTGCCAGTGTTAGTTTGGCGCAAAGTTCAGGTCCTGATAATACAAAATGTACATTGGGGAAATGCGGTTCAATTCATAAACCTGTTTTAGGTCCTGTAGTTCCAACAGAGAGTTATATTGGCGATCAACTTTCTGGAAAGGAGAGACGCAAAGCCAAAGTGAATATGACACACGAACAaatacacaaatggctgattgAGTGTTCTTCGAACCCTGATGAGATTCAGGATGATCTTGATGATGATTTCGACTCAGATTTAAGGCCGAATAACTTTAGTTCAACACCACCACCAACTCGCGATGACAAGGAAAGTACATCATTTAGTTCGTCTTCGAAAGCTACACGTGATTTGGGTAAGAGTGAAAGTGCTTGGTCGGCCAAAGGACCGTCTCTCAAAGCCACCCCTGTTGTTGCGACTAGTAGTgcaataaataatagaaaagaaGATATAAAACCTATCGAAACTACAAGTCCACGACTGGAGGAGGAGATGGAGAAGAATTCTCCTGTAATGAATTTGATATTTGACAAAACACCGGTTAATAAACAATCGCCTGATCCAGGAAGTGTAGATGCCGACGAGAAACTTACTCAGTCAGATAAAACTGAGAAGAAGAATGACAAAAAAGCCAAGGAAGAGAAAATTACCATCAAAACATCAACAATAGAGGCAAAACAGGGCAAAGTTGCTGAAAAGGAGGCCGCCTcctcaacaacaaataaatcgTTGGCGGTTGGCAAACAAAATACTACCCAAAAATCTTTAAATCAGAAGAAAACAGCTCCATCCCCGGTCACTACACCGACAACAACATCTACTGCTAACaaacaaaatcgtaaaaaaGCTGTATCCGAGGTAGTCGTGGAAGAAAAATCGACAAATTCCAATCAAAAGGATTCTGTCAACCCTCCAGAAGTTGCAAATATTAATTCAACATCAAACTCTATTAATCGTACTCCTAAGCGTACTCCGGTTTATCAGCAGAAGCAAACcccaaaacagcaacaacagcagcagcttcAACAGCAAGAGAACACGGACCTTAAAATATCAACAACCACAAGTCATAAGCGGGCTGCACCGACTTATGGCACCGCATTTTCTGTTGAgaatgaaaaatctatttattcgTTCGATAAGGACGATGTTGAAGACCAGGAGAAATCAAACAAACCTTCGACGTATCGACGACAAAGCAGAAAAGATTCGCATGTCGATAATGGCATTAATACAACACCAACTGCACTACAACGTACTCCACCCACAAAACCAAAGCGAAATGCTGCAGCTGTTGCTGAAATCGCCAATAAAGAATTGGCTGGCGGTAATTCCCAAACTAGTTCAGTTTCATTGACTCTAAGTCCATCGGAAAAAACTAAATTGGTTAAAGTGAGCCTTGACGGCGATAAAACTACTACAAAGACTACAAAAGGAGGAAAGGGTGGCAAGAAAAACGTTCAAGCCGAACCAAAGCCACCGGCCAATGACGCTGAATCTGATTCAGGAGATGGCCATACTTTCTACATACCTTTGCAAGGCGTTGGTGCCGGAGGAGATGGTGACGGTGGCATTCAGGGAGTGGCAGTTAAATTGGGACGTGAAGGTCCCGATGGTCCCAATCAAAAGGTTATCATGCATGCTACGCTAGTGACTAAGGCTCAAATGGGATCTAACACTAAGCCACTACCTGACACCATGAATGTCTCAGATATTGTTAAGAACTTGATGACGAGCGACAAGAAGGCATCGGGTGCATCGACATCAGCCGCAGCTGCAGCGGCTACAAATTCATGTTCGAATAGTTTGAAAAATGTACCAATTGGAACAGTACAACCACGATTCAAGGGAGATTCAGCTACACAAGGTCCATCTACATCTTCTGCTGGCGGGGGTGGTGGCGGCGGTGCTCTGCAACGTGTCAATTCAAATTCTTCTCTATTTTCCGGCTCAGTTAAATCACGCAATGCCGCTGCTGCAGCTGCTGCAGCGGGGGCTTCAGGAAGCGGAGCTGCCGGCCATGGTtcgaataaaaagtttaaagacgATACGCCCATTAAAATGGCCAATAACACAGCATTCCCTCGACATGATGACCCCACACAGATGGTGGAAGCTCCTATTTTCCGGCCCTCCGAAAAAGAATTTGCAGATCCTATTGAGTTTATAGAGCGCATCACACCAATTGCAGCCAGATTTGGCATCTGCAAAATTATACCACCAGCTTCCTTTAAACCCGAGTGTCGCATATCAGATGAAATGCGTTTCACGGCCTACAATCAATATGTGCACAAATTGTTGCACCGCTGGGGTCCCAGTGCAAAAGAGTTAAGTGCAATTAAAAAGTACTTGGCCACTCAAAGTATCGTGATGAATCATCCACCCTGGATAGGTGGTATGGAAGTAGATTTGCCACGCCTATATCACACTGTCCAAGAGCTGGGCGGTCTGAAGGAGGTAATTGAAAAGAAGAAATGGGCTCGGGTTGCTGAAGAGATGTGTATTCCTAAACTGGCGCAGGATCGCGTGACCAAATTAGAtgatatttattgtaaatacttgCTTCCATATGACACACTCTCGCCAGCCGAACGTCAAAAACTTTTCGATGAAGTTGAAGCCGATTGGGCTAAAAGAGAAGCAAGAGCCCGACGCAATGCTGATCGGTTTGTTAACACTGAAAGCGTTTCCAATGAAGAAGACGACGTCTCATCGGAGAACGATGAAGAAGAGTCTGAAGAAGAAGTCGATGGTGTATCTATGGAATGTATTGTTAAGGGACGCAGTATGCCACTGAGTCAATTCTATCGTATCGCAAGAAACACAATGGCTCTGTGGTTTAAAAATACCGAGCCCACTGTGAACGAAGTTGAAGCTGAGTTTTGGCGGCATGTGGCCGTTCGTGATAGTCACGTATGTGTACATTCCGGGTCGATTGATTCCTCTGGTTGGGGGTTCGGCTTTCCAAGTCCGGGACCGAAAGGAAAGGGATCCAATTACGCCAAACACCCTTGGAATCTAAAAGTGCTTACAAACAACACTGGGTCAGTGTTGCGTTCATTGGGACCTGTCATGGGTGTAACTGTACCAACGCTGCATGTCGGAATGCTATTCTCGGCCTGTTGTTGGTACCGCGACCCTCACGGTTTGTCGTGGATAGAATATTTACATACCGGTGCCTCTAAACTGTGGTACGGTATACCAGATGATCAAAGTGCCAATTTTAGGGCTGCTCTGACCTCACTCATTCCTACACACTGTCAAAATAAAACCATTTGGTTACCCTGTGATACTGTTATGGTACCTCCACATATGCTCACCGACCGAGGAGTGTCCCTCTGCCGCATTGAACAGAAACCTGGAGAGTTTATCGTAGTATTTCCCCGAGCCTACACATCAAGTTTAGCCACCGGTTATGTGGTATCGGAAAGTGTTTATTTCGCAACATCGTCCTGGTTAGATTTAGCTAAAGATGATTTTAGAgACATCCACGACAGCTGCGAACCTGCTATGTTCTCATTGGAACAATTATTGTTTGCCTTAGGTTATGATCAACGTGTTACGCCTGATACCTTACAACAGATGCTACCAATGTTACAAGAGGTCTTTGAAAAAGAAACTGCTGCCAGAGAGCAACTTAAGGCTGCTGGTGTAACTTCCACTGAAAAAGTTACGAATGAAAAAAGTGGTAaaggaaaaaaacaacaacagcctCCACATAAATCCATTGAAAGTGAATGTGATCTTTGCCGTGCAAATCTTTACATTTCAATGGTGCGCACAGATGAAGGTAACATATACTGTCTTCAGCATGCTTTGAAAAATCTCAATAATGGCAACATACAGGCCAAACAATGTAAGCTTATTTATGCCTACAATATCGACGATGTTGAGAACCTCATTAAGAATCTAAaagataaaattcaacaaaaacgtGCAGTAACTGGTAAGAAACAAAAATAG
Protein Sequence
MVVSKDSKRKRKESSPPATPQQQSTTAVESSPEMPKRTKVQAQRKFAQGQSAPQSSYSSIIAASSSSNTGPSTSSESREPPTEILPNKRPKTEDFLTFLCFRGSSALPPHLDFLNQGKSKEPERPVKKPTIKPVIKKKGKKGRPPKNAKQKEENIPAKAEESEVNKKVEVAPEENQTNTNENEEKNKNPEKVQVEVEEKEEEEEEEDDNVPTFAVRKRAEVVADGNRRSNRSNAEEKCNNFTETSKRRSNRASTKGSKVMLDHLSDEEDDEYFSAVDENSKALNSDIDGKERKTTKTPVNSERKSETPSKESEMTGKSRKGRPPSTNKKKEVESCKENEREESVKSAKSDIKEKIPVKRPRQKESPIFIPSPEPSGRMTRQRAFFEPVKVPHRDNEDTEDEINKDVTEERVKPETKLKPTESAIDKINEPLKIKAEDKDEKTISKQLVVNDDKNKPTQLDVFDFSSDDEQPLAKTIKLKKSGLNKSSPKKTNPRGKKPSPKKETIEESNKTNEKEELKTEPEESVKKDAVATETVMSAIEDESKPKGKRLSGQAAKNSKRKENEEGLKDVDRESTLNSPKKSNARQSRKKTKAESNENTAVENETEDNQGSPTRNQRPSRKTKEAATIYMGIIGHRLQMAEDDDDDISLSSFDRPNVREMEKMENELKRNTSSVGKGSPPPKQSKSADMPQPIALPIATAVAVETKPTTTGRRGRPPKNPKIQPLVQPPKREIEGMLVKKGAIAKLTQSTENLAEAKDSKTEPSKAGTEDDEDFLLNEELNETKRKLEKSFSDSDDEPLAIKAHVKAGDKDGEDSRKSAGGVECLSPTTLPIVNPPVATVSGLISLSMLPITPKSVTTINSIQTQPTPQPTQTAAVTTCVVPTTALATSSAISAPMAATIPSPISCTIQPPAPVTPTSQSPFKTIEKKSPIPTSKILNVPATYGIPPASPTGNIAAGINTNFGKSPMYVPQSPAHYHSPHPSHIRPTSSLPQFPVQSVKNPSLVAPPSNTVTSHLTTPPSQMTAQSPIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNTLSRPGNSTGNNNAFPSPSPVKFDMSGSSSGLLKNSSLSAPNVQMSPKTLISSNMNFMGNNPAASTTVAGQISNDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYIGDQLSGKERRKAKVNMTHEQIHKWLIECSSNPDEIQDDLDDDFDSDLRPNNFSSTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVATSSAINNRKEDIKPIETTSPRLEEEMEKNSPVMNLIFDKTPVNKQSPDPGSVDADEKLTQSDKTEKKNDKKAKEEKITIKTSTIEAKQGKVAEKEAASSTTNKSLAVGKQNTTQKSLNQKKTAPSPVTTPTTTSTANKQNRKKAVSEVVVEEKSTNSNQKDSVNPPEVANINSTSNSINRTPKRTPVYQQKQTPKQQQQQQLQQQENTDLKISTTTSHKRAAPTYGTAFSVENEKSIYSFDKDDVEDQEKSNKPSTYRRQSRKDSHVDNGINTTPTALQRTPPTKPKRNAAAVAEIANKELAGGNSQTSSVSLTLSPSEKTKLVKVSLDGDKTTTKTTKGGKGGKKNVQAEPKPPANDAESDSGDGHTFYIPLQGVGAGGDGDGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMGSNTKPLPDTMNVSDIVKNLMTSDKKASGASTSAAAAAATNSCSNSLKNVPIGTVQPRFKGDSATQGPSTSSAGGGGGGGALQRVNSNSSLFSGSVKSRNAAAAAAAAGASGSGAAGHGSNKKFKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPSEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKLLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSENDEEESEEEVDGVSMECIVKGRSMPLSQFYRIARNTMALWFKNTEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGFGFPSPGPKGKGSNYAKHPWNLKVLTNNTGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATSSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGYDQRVTPDTLQQMLPMLQEVFEKETAAREQLKAAGVTSTEKVTNEKSGKGKKQQQPPHKSIESECDLCRANLYISMVRTDEGNIYCLQHALKNLNNGNIQAKQCKLIYAYNIDDVENLIKNLKDKIQQKRAVTGKKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00741633;
90% Identity
iTF_00259560;
80% Identity
-