Cvic017518.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- HLF
- Assembly
- GCA_958450345.1
- Location
- OY288234.1:64225425-64268737[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.075 1.8e+02 3.2 0.2 31 54 175 198 169 201 0.78 2 2 3.3e-17 7.9e-14 52.4 12.0 1 64 521 584 521 585 0.97
Sequence Information
- Coding Sequence
- ATGGATTATCAATTGCCACCGCAAACTTTACAATTGGCTAGCAATGCAGTGGTGGGCAGTCTAATGAACAGCAATGGCAACAATAATGCTCTAAgccagcagcaacagcagctaAATCAGCAACAAAATGCTCAACTACAACTGCTGCAACTCAATcaccaacagcagcagcagcaacaacaacagcaacttgTGAAtaatcaacagcaacaacaattgcTGAATCACATGACTTCTGGGCAACAAACGTTGCCCTCTTTAAGTAGTCTACCCCTGCAAGTTGTCAACCAGCTGCCACATTTGCTGGCCAATAATGGTGTAAcgctaaacaacaacaatagcagcaacaacaacaacaacaacaatacaaatataaataatttaaatatactcaataataatttaaacaacaattCCTCCGCactcaacaataacaacaacaactctaATAATTCAACTGTCAATACAAATCTCACCtccaataacaataacaacagcaatagCACGAACAATGTATTACTACGTAATACCATGCAACATGTGGCAAATGCTAATCAACAATTGCAACAAACCATTAATAGTTTAAGCAATAATTTGGTTTCCTCTTTGCCACCCAGTACACAATTGTTGCAGCATCATCTACAACATTTAGCCAATGTCAATAATGCGGTAGTACAgctcaacaacaataacaataccagcagcaataacaacagcaacagttcGTCACCCAGCAACAATTCTGCCAACAATAATATGTtgttaaataataacaacaacaatccCTCCACACCAAATAATAATCTGGCCACACATTTAAGTGACAATGTGGTGGCCCACAATATTGTCAATGGTCTGGTGGGAGTTTTAAATAatgtcaacaacaacaacaatagcaataataataacaacaacaacagcaatacgaatttaaataataacattttaaacaatGGGGGCAACCAAAATTCTGCGGCATCTAACTTGGAGGACAACAGTCGCTGGACTCAGTTTCAAGTGCAACAATTGTGGAAACAACATGCATCGTATTTGAATGGTAAATCCACATCGAATAGCAAAGAAGTAATTTGTCCTGATGACAAATACAAAGAAGAAGGTGATCTCTGGAATGTTGAGGCTCAAACGGCCTTTTTGGGTCCCAATCTATGGGAAAAAACCCTGCCGTATGATGCTGACCTTAAGGTAACACAATATGCCGATTTAGATGAATTTTTATCGGAAAATAATATACCTGATGGCTTGCCGGGTACCCATTTGGGTCATTCAAGTAGTTTGGGTCATCGTTCAGATTCCCTGAGTCATGCAGCTGGTCTGTCACTGGGACTTGGACATATAACAACAAAACGCGAACGATCACCATCACCTTCAGATTGTATTAGTCCGGATACCTTGAATCCACCATCACCAGCTGAATCAACATTTTCCTTTGCATCATCGGGGCGGGATTTCGATCCGCGCACTAGAGCATTTTCCGATGAAGAGCTCAAACCGCAACCCATGATAAAAAAATCACGCAAACAATTTGTTCCAGATGAACTTAAGGATGACAAATACTGGGCCCGTCGACGAAAGAACAACATTGCTGCCAAACGTTCACGAGATGCCAGACGACAAAAAGAGAATCAAATCGCCATGAGGGCGCGATATTTGGAAAAAGAAAATGCTACATTACACCAAGAGGTAGAGCAGCTAAAACAGGAGAACATGGACTTACGTGCACGTCTCTCAAAATTCCAGGATGTGTAA
- Protein Sequence
- MDYQLPPQTLQLASNAVVGSLMNSNGNNNALSQQQQQLNQQQNAQLQLLQLNHQQQQQQQQQQLVNNQQQQQLLNHMTSGQQTLPSLSSLPLQVVNQLPHLLANNGVTLNNNNSSNNNNNNNTNINNLNILNNNLNNNSSALNNNNNNSNNSTVNTNLTSNNNNNSNSTNNVLLRNTMQHVANANQQLQQTINSLSNNLVSSLPPSTQLLQHHLQHLANVNNAVVQLNNNNNTSSNNNSNSSSPSNNSANNNMLLNNNNNNPSTPNNNLATHLSDNVVAHNIVNGLVGVLNNVNNNNNSNNNNNNNSNTNLNNNILNNGGNQNSAASNLEDNSRWTQFQVQQLWKQHASYLNGKSTSNSKEVICPDDKYKEEGDLWNVEAQTAFLGPNLWEKTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLGHSSSLGHRSDSLSHAAGLSLGLGHITTKRERSPSPSDCISPDTLNPPSPAESTFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLSKFQDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01173917;
- 90% Identity
- iTF_00259521;
- 80% Identity
- -