Csim020465.1
Basic Information
- Insect
- Calliopum simillimum
- Gene Symbol
- stc
- Assembly
- GCA_951812925.1
- Location
- OX638369.1:115303661-115311323[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3 4.4e+04 -4.4 1.6 15 19 588 592 587 592 0.81 2 12 0.1 1.5e+03 0.6 0.2 4 10 621 627 620 629 0.95 3 12 1.7e-06 0.025 15.8 14.5 4 19 635 650 633 650 0.91 4 12 1.4e-06 0.02 16.1 11.1 3 18 688 703 679 704 0.88 5 12 2.3e-07 0.0033 18.6 18.6 1 19 744 762 744 762 0.98 6 12 0.00011 1.6 10.1 16.3 4 18 810 824 803 825 0.86 7 12 0.053 7.8e+02 1.5 11.5 1 11 865 875 865 886 0.94 8 12 8.6e-10 1.3e-05 26.4 15.5 1 18 892 909 892 910 0.97 9 12 3 4.4e+04 -4.6 1.2 6 10 939 943 939 943 0.88 10 12 3 4.4e+04 -8.7 12.3 4 18 951 966 947 967 0.78 11 12 8.5e-08 0.0013 20.0 10.4 1 16 1003 1018 1003 1026 0.94 12 12 5.6e-06 0.082 14.2 14.8 1 19 1036 1055 1036 1055 0.96
Sequence Information
- Coding Sequence
- ATGTCAGCGGAGTctcaagaaaaacaacaacaactacagcagCTTCAGTCGTCAACGTCACAACTCTGGCAGGGATTCGTTGGCAGCGGTGGAGGCGGCATCGGTATcgatacatcaacaacaacaacagcagcagcagtcacTGATGCCACTTTATTGGGCGCAACAACAGCAGTTCAAtcccaaaataataataataattatgttaattttaatcaattcaTCATGCAACATAATTTTCTTGGCGGTAATGGTGTCACCAATAATGCACAACAAAATAATGGCCTAGATGGTGCAGTTGGTGATGATCTTTTTAGCAACATCAATAGCTTCAATGATTTGGACAACTATCAGCAGGCAACAACAAATCTTTTTGGCAACAATACTTCTTCCTCATCGCAGCTCTTTCCATACAGCTTTGACAATGACCTAAGCACATTCTACAACCTTAATGGCACTGGTGGTGGCGATGGAATAGCTGGCAGCAGTGGTGATCGCGCCAACGATAGCGGTTACAATAACTTAACGGCGGCAACAACTAATAACCATTTCTATGACAATTTGTACACGCCCTTTGGAACTAGTGGTGGCACAACTTACTATGCCAATCCGTTTGCCACTGGTTTTGATTTTGGTACAACTGTTACAGGAAACTCACAATTACATGCCACAGCGCCTGAATTTGTGCCACGTTTTAATAATCTAACATTGAATGATGGTAGCGGCGGAAGTGTCGTCGATTTTGTAACAGAATTAAAGGCCCACAGTGGTGGTGGCGGCGGCAGCGAAAAACTTGAACAACtcaaaaataacttcaaaaattccagCAGCAATTCATTAGAATCAGCATTTGCTGCCTATGACTTTAATAATAGCAGTAAATCTGCTATATCAACAGTACCACCAGTAGCAGACAATTTAAAAGAATTAGAGAAAGAAGAGTCAAAATCAAATGTCAACGAGTGTAACAACGACAACACggattttataattaataatttaGCTCTACCTATCGCCACTCCTGCTGCATTAAGCGCCAATCAAACGACGCGTTCTACAGGTGCTACTAGCAAGCAGTTGAGTTCGAATAATCATAATAACACCAACAGCAACATCGTCAACAGtaataattttaacaacaataacaatcaaCGCTCCGATTCACGCGGTGCTTCCAATGGTTTTGCTACAGCAAATACAGCCCCCCTAACGCAAATAATGCCAGAGAAGCCAATGCAAATAACACAAACGTCACAATCGCAATCACAGCCGACGGCTGTTAATAAACGTTACCCCTTTACCAAAAATGGACGTCGTTCCATGGATTATCATGAGCGCGAGCGTGAGGATCGTTATGAACGTGGCAGTAACAGTCATGGTCAGCGCGGCAGCAATCAGCGTGATCGTGATCGTTATGACAATCATCGTAGCAATAAACGTCGTGACGATTGGAATCGAAATCGTGATCGCATTAATGGATATCGTGTTGAGGAAAAATACTCATCAGATAATGGAAAGGATAGTCCACTGCCATCACCCGAGAAGAAGTCACCTAAAAAAATCTACCCAGAGAATGAAAAACTTTCACAACGCGAAAAACTAATACGTGACATTGAAACGCGTCGTCTCGAGTGTCTGGTCTGTGTTGAACCCATTAAGGCGCATAATTCGGTATGGTCCTGTAACAACTGCTATCATATACTACACTTACAATGCATTATAAAATGGGCCTCCAGCTCAAAATCGGATGATGGCTGGCGTTGTCCTGCCTGTCAGAATGTGGTAAAAGATGTACCACGCGATTATTATTGTTTCTGTGGCAAACTCAAGAATCCACAATATACACGTCAAGATATTGCGCACTCCTGCGGTGAAGTTTGCGGACGTGTTGAAGGTTGCGCCCATGCGTGCACTTTGCTCTGCCATCCCGGGCCGTGTCCACCATGTCAGGCAAATGTTCGCCGCGAATGCGGTTGCGgtaaaacaactaaaataatGCAGTGTTGCCTTAAGGAACCAATCGAATGTGATTCCACATGTGGCAAGCTGCTCAATTGTGAATTACATACTTGTGCAGAAAAATGTCATGCCGGCAAGTGCCCAGCTTGCGCTGATAAAGTGGATCAACGCTGTCATTGCACCAAGCAGGAACGTCAAGTCGCCTGCACACGTGATTCGCATGATAAAACCACCTACTCGTGCGGTAAACCATGTGGACGTGATTTAAGCTGTGGTAATCATAAATGTAAAGATTGTTGCCATGCGGGTGAATGTCGTCCATGCAAATTAAGCCCCGATCAGGTGACATCTTGTCCCTGTGGCAAAATGCCTGTAGTGCAAGGTCAACGTAAGTCCTGTTTGGATACTATTCCAGTGTGTGAGGGAGTCTGCGGTAAAACGCTGCGTTGTGGAAAAGCAGcacATCCCCATCACTGCACCAGTAAATGTCATTTGGGAAATTGTCCACCGTGCAACAAACAGACTGCTGTCAAATGTCGTTGCGGTCATATGGATCAGATGATTAAATGTCGTCAGCTATCAACACGTGCTGATGATGCACGCTGCAAGAAACGTTGCGTCAAAAAACGCTCTTGTGGAAAACACAAATGTAATCAGGAATGTTGCATTGATATTGATCACATTTGCCCATTGCCTTGTAATTACACGCTGTCATGTGGAAAGCACAAGTGCGATCAGCCCTGTCATCGCGGTAATTGTCCACCCTGTTATCGTAGCTCATTTGAGGAACTTTATTGCGAATGTAGCGCAGAGGTGATTTATCCGCCAGTGCCTTGTGGCACTAAACGTCCCATTTGTAAGCGACCCTGTAGTCGTACACATCCTTGCGATCATACGCCACAACACAACTGCCACTCGGCCACAAGTTGCCCGCCGTGTATGATGTTTACCACAAAATGGTGTTATGGCCAGCACGAGCAACGTAAAACCATTCCATGCTCGCAGGAGAGCTTTAGTTGTGGGCTGGCATGTAATAAACCACTGCCATGTGGACGTCACAAATGCATACGATCATGTCATGAGGGCCAGTGTCAATTGGCACAGGGTgaaatatgtaaacaaaattgCACAGCGTTACGTGCAACATGTGGACATAAATGCATGTCGCAGTGTCATGAGGGTGAATGTCCTGAGACGCCTTGTAAGGAAATGGTTGAGGTGCAGTGTGAATGTGGAAATCGTAAACAGTTACGTTCTTGTCATGATTTAGCACGCGAATATAGTCGCATTGCCACCGCACAATTGGCATCCTCAATGGCTGAAATGCAGCGTGGTAATTATATGGAACTGAGTGAGATCTTAGCACCAGTCAAGgcgaataaaacaaacaaaacACTTGACTGCAACGACGAATGCCGTCTGCTTGAACGCAATCGTCGCCTCGCCATTGGGCTACAAATACGCAATCCCGATTTGCCACAAAAGCTTCTGACCAAATATTCAGATTTCATACGCAATTTTGCCAAACGTGATCCAATTTTGGTAAAATCCATACACGACTCGCTAACAACGCTCGTTAAGCTGGCCAAAGAGAGCAAACAAAAATCGCGAAGTCACTCTTTTCCCACTATGAATCGTGAGAAGCGTCAATTGGTGCATGAAATGTGCGAAATGTTTGGTGTTGATTCAGTTGCTTACGACGCAGAGCCGAATCGTAATGTTGTAGCAACGGCGCACAAGGATCGGTCCTGGCTGCCTGCTACCAGCATAATGGAAGTTATACAACGTGAAACTGGACAGCGTCGTGTGCCTGTACCAAGCAACAATGCCTGGGGCATTAAAAGATAA
- Protein Sequence
- MSAESQEKQQQLQQLQSSTSQLWQGFVGSGGGGIGIDTSTTTTAAAVTDATLLGATTAVQSQNNNNNYVNFNQFIMQHNFLGGNGVTNNAQQNNGLDGAVGDDLFSNINSFNDLDNYQQATTNLFGNNTSSSSQLFPYSFDNDLSTFYNLNGTGGGDGIAGSSGDRANDSGYNNLTAATTNNHFYDNLYTPFGTSGGTTYYANPFATGFDFGTTVTGNSQLHATAPEFVPRFNNLTLNDGSGGSVVDFVTELKAHSGGGGGSEKLEQLKNNFKNSSSNSLESAFAAYDFNNSSKSAISTVPPVADNLKELEKEESKSNVNECNNDNTDFIINNLALPIATPAALSANQTTRSTGATSKQLSSNNHNNTNSNIVNSNNFNNNNNQRSDSRGASNGFATANTAPLTQIMPEKPMQITQTSQSQSQPTAVNKRYPFTKNGRRSMDYHEREREDRYERGSNSHGQRGSNQRDRDRYDNHRSNKRRDDWNRNRDRINGYRVEEKYSSDNGKDSPLPSPEKKSPKKIYPENEKLSQREKLIRDIETRRLECLVCVEPIKAHNSVWSCNNCYHILHLQCIIKWASSSKSDDGWRCPACQNVVKDVPRDYYCFCGKLKNPQYTRQDIAHSCGEVCGRVEGCAHACTLLCHPGPCPPCQANVRRECGCGKTTKIMQCCLKEPIECDSTCGKLLNCELHTCAEKCHAGKCPACADKVDQRCHCTKQERQVACTRDSHDKTTYSCGKPCGRDLSCGNHKCKDCCHAGECRPCKLSPDQVTSCPCGKMPVVQGQRKSCLDTIPVCEGVCGKTLRCGKAAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECSAEVIYPPVPCGTKRPICKRPCSRTHPCDHTPQHNCHSATSCPPCMMFTTKWCYGQHEQRKTIPCSQESFSCGLACNKPLPCGRHKCIRSCHEGQCQLAQGEICKQNCTALRATCGHKCMSQCHEGECPETPCKEMVEVQCECGNRKQLRSCHDLAREYSRIATAQLASSMAEMQRGNYMELSEILAPVKANKTNKTLDCNDECRLLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRNFAKRDPILVKSIHDSLTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVDSVAYDAEPNRNVVATAHKDRSWLPATSIMEVIQRETGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972742;
- 90% Identity
- -
- 80% Identity
- -