Csim035815.1
Basic Information
- Insect
- Calliopum simillimum
- Gene Symbol
- ZNF217
- Assembly
- GCA_951812925.1
- Location
- OX638372.1:53811737-53816501[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.21 25 6.8 0.9 2 23 156 177 155 177 0.95 2 15 0.00016 0.019 16.7 0.7 3 23 184 204 183 204 0.98 3 15 0.00033 0.039 15.6 4.0 1 23 212 234 212 234 0.98 4 15 1.1e-05 0.0013 20.3 5.3 1 23 242 264 242 264 0.98 5 15 0.00016 0.019 16.6 0.1 2 23 270 291 269 291 0.97 6 15 0.0016 0.19 13.5 1.3 1 23 297 319 297 319 0.97 7 15 0.002 0.24 13.2 2.7 1 23 324 346 324 346 0.98 8 15 0.048 5.7 8.8 0.3 2 16 352 366 351 368 0.89 9 15 0.24 29 6.6 0.0 8 23 538 553 537 553 0.94 10 15 0.00015 0.018 16.7 3.6 1 23 561 583 561 583 0.99 11 15 0.0007 0.084 14.6 2.7 1 23 591 613 591 613 0.98 12 15 2.4e-05 0.0028 19.2 0.1 2 23 619 640 618 640 0.97 13 15 2.5e-05 0.003 19.2 0.3 1 23 646 669 646 669 0.97 14 15 0.0097 1.2 11.0 3.9 1 23 674 696 674 696 0.97 15 15 0.12 14 7.6 0.0 2 15 702 715 701 717 0.88
Sequence Information
- Coding Sequence
- ATGGAATTCTTTCAAAGGTGCACTTTATTGGATGTGGATCCACAAGACCAGCTGCCTCAGGTACTTTGCTTAGATTGTGCTGCTCAGCTACGCGATGCCTATGATTTCGTTAGAAAGGCAACCGATTCGCATCAAGCTTTACTGTTGAAACTTTTATCACTCCAAATTTGTGAAGAAACAGCTGCGGAAAACTTTGAATATGTGACTGTGGAACAAACGGATAACGAAGATGATGACACAGACAGCAAGACATCTTCGTTGAATGTAGAACGAAAATTGACTGCTGATTCGGATGGAAAAAATGACAATGAACCTACGCCTTCGAATAGCGCCACATCTGCACAGAAAGACACCGTGGTGATAATTCCAAGTACCAAccctttgaaaagaaaaaaacgcggAAGACCAAGTTCAATTTCTCTAactgaaatagaaaaattagaTACGCGAGATAACGATTTGATAAAATGTGACTTTTGCAGTGGTATTTTTACTCGAAAACAAATGAAGCGACATATATCACGTGCACACAATGTAAAAATGCTGCTATGTCATGCATGTCCACGTACATTTAAGGATCCAGGCTCATTACGTCAGCATGCGCTCACACATGAAGAAAATCGACAGCGTAATTACACTTGCGAGCATTGTGGGAAGAAATTTCTGACTAAAACTTCTTATCAAAATCATGTTAAGATACATGACACCAATCGAAAAGCTGCATTCCAATGCCCACATTGTGAGAAATCATTTTTTCATAAGGGCAGTCTAAAACTACATATGCTCTATCACACAGGAGAAACATTGGAatgcaaaatttgtgcaaaaagaTATCCGCGCCTCGTTGATTTAGAAGTACATTTACGAAGTCATTCCGGAGACTTGCcctataaatgtatttattgtgATAAAGCATTCACACAGGCAGGTATACTTAATAAACATGTGAGACATCATGAAGGCTACCGTTACAAGTGTGACATCTGTAATAAAGAATACCTTCATCAGTCGACACTGATTCAGCATAAAAAGGAACACATGGGACTACCTTTGAAATGTTTGATATGTGGAAAAGGATTCGTCAAGAAATCAAAGTACACTTTATTGGATGTGGATCCACAAGACCAGCTGCCCCAGGTTCTCTGCTTAGATTGTGCTGCTCAGCTACGCGATATCTATGATTTCGTAAGAAAGGCAACAGAGTCACATCAAGCTTTGCtgttgaaacttttttatgaagaaacaGCTGGAGAAAACTTTAAATGTATGACGGTGGAAAAAACTGAAATCGAGGATGATGACGAAACAGCTAGAGAAAACTTTGAATGTGTGACAGTGGAAAAAACTGAAATCGAGGATGATGACGAATTATTGTTCACAAACAGCAAGACATGTTCGCTGAATGTAGATCAGGAATTGACAACTAATTCGAATGGAAATAATGACTATGAACCTAAGCCTTCGAATAACTCCACAACTGCACAGAAAGACACCGAGATAGTAATTCCTAGTGCTAAAACTTTGAAAAGAAGAAAACGTGGAAGACCAAGATCAAGTTTACaatctgaaataaaaaaaatagatacgCAAGATAAAGATATGATAAAATCACGTGCATTTAAGGATCCAGGCTCATTACGTCAGCATGCGCTCACACATGAAGAAAATCGACAGCGTAATTACTCTTGCGAACATTGTGGGAAGAAATTTCTGACTAAAGCTTCTTATCAAAATCATGTTAAGACACATGACACCAATCGAAAAGCAGTATTCCAATGCACACATTGTGAGAAATCATTTCTGTATAAGGGCGGTTTAAAACTACACATGATCTATCACACAGGAGAAATGTTGGAATGTAAAATTTGTGCAAAGAAATTTCCGCGCCTTGGTGATTTAGAAGTACATTTACGCAGTCATTCCGGAGATTTGCCCTATAAATGTATATATTGTGATAAAGCATTCATACAGGCAGGTGCACTTAATAAACATGTGAGAAGGCAACATGAAGACTACCGTTACAAGTGTGACATGTGTAATAAAGAATACCTTCATCAGTCGTCATTGTTTCAGCATAAACAGGAACACATGGGACTACCTCTGATATGTTTGATATGTGGAAAAGGATTCGTCAATAATTCAAAGTATGTATATAActag
- Protein Sequence
- MEFFQRCTLLDVDPQDQLPQVLCLDCAAQLRDAYDFVRKATDSHQALLLKLLSLQICEETAAENFEYVTVEQTDNEDDDTDSKTSSLNVERKLTADSDGKNDNEPTPSNSATSAQKDTVVIIPSTNPLKRKKRGRPSSISLTEIEKLDTRDNDLIKCDFCSGIFTRKQMKRHISRAHNVKMLLCHACPRTFKDPGSLRQHALTHEENRQRNYTCEHCGKKFLTKTSYQNHVKIHDTNRKAAFQCPHCEKSFFHKGSLKLHMLYHTGETLECKICAKRYPRLVDLEVHLRSHSGDLPYKCIYCDKAFTQAGILNKHVRHHEGYRYKCDICNKEYLHQSTLIQHKKEHMGLPLKCLICGKGFVKKSKYTLLDVDPQDQLPQVLCLDCAAQLRDIYDFVRKATESHQALLLKLFYEETAGENFKCMTVEKTEIEDDDETARENFECVTVEKTEIEDDDELLFTNSKTCSLNVDQELTTNSNGNNDYEPKPSNNSTTAQKDTEIVIPSAKTLKRRKRGRPRSSLQSEIKKIDTQDKDMIKSRAFKDPGSLRQHALTHEENRQRNYSCEHCGKKFLTKASYQNHVKTHDTNRKAVFQCTHCEKSFLYKGGLKLHMIYHTGEMLECKICAKKFPRLGDLEVHLRSHSGDLPYKCIYCDKAFIQAGALNKHVRRQHEDYRYKCDMCNKEYLHQSSLFQHKQEHMGLPLICLICGKGFVNNSKYVYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -