Basic Information

Insect: Calliopum simillimum
Gene Symbol: -
Assembly: GCA_951812925.1
Location: OX638369.1:28379975-28393416[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0015 0.18 13.5 0.2 2 23 199 221 199 221 0.97

2 12 0.00027 0.033 15.9 1.4 2 23 240 262 240 262 0.94

3 12 2.7e-06 0.00033 22.2 0.3 1 23 268 291 268 291 0.97

4 12 7.7e-05 0.0092 17.6 2.4 1 23 297 319 297 319 0.97

5 12 1.4e-06 0.00016 23.1 0.3 1 23 325 347 325 347 0.99

6 12 0.0015 0.18 13.5 0.2 2 23 610 632 610 632 0.97

7 12 0.00027 0.033 15.9 1.4 2 23 651 673 651 673 0.94

8 12 2.7e-06 0.00033 22.2 0.3 1 23 679 702 679 702 0.97

9 12 7.7e-05 0.0092 17.6 2.4 1 23 708 730 708 730 0.97

10 12 1.4e-06 0.00016 23.1 0.3 1 23 736 758 736 758 0.99

11 12 0.0071 0.85 11.4 1.1 2 23 978 1000 977 1000 0.97

12 12 0.0022 0.26 13.1 0.8 1 23 1003 1026 1003 1026 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0015	0.18	13.5	0.2	2	23	199	221	199	221	0.97
2	12	0.00027	0.033	15.9	1.4	2	23	240	262	240	262	0.94
3	12	2.7e-06	0.00033	22.2	0.3	1	23	268	291	268	291	0.97
4	12	7.7e-05	0.0092	17.6	2.4	1	23	297	319	297	319	0.97
5	12	1.4e-06	0.00016	23.1	0.3	1	23	325	347	325	347	0.99
6	12	0.0015	0.18	13.5	0.2	2	23	610	632	610	632	0.97
7	12	0.00027	0.033	15.9	1.4	2	23	651	673	651	673	0.94
8	12	2.7e-06	0.00033	22.2	0.3	1	23	679	702	679	702	0.97
9	12	7.7e-05	0.0092	17.6	2.4	1	23	708	730	708	730	0.97
10	12	1.4e-06	0.00016	23.1	0.3	1	23	736	758	736	758	0.99
11	12	0.0071	0.85	11.4	1.1	2	23	978	1000	977	1000	0.97
12	12	0.0022	0.26	13.1	0.8	1	23	1003	1026	1003	1026	0.95

Sequence Information

Coding Sequence: ATGTGCAGTTTAACAACGTTTTCAAATAGCCATTTAAAATCAACAaatgaacaatttttctttGATCGACGCAAGTGTGGCAATGTCTACGTTTCTCTGGATGCCAAGCTTCTAACTCTGCACTGCCTGTTTTACACTTTATATTTGACTACAGAAAAAGATGAGGATCTCGATGTAAAAGAAGAATTGTTAGAAGATGGAACTCCAACTGAAAATGACGCAAAGCCAACAGTGAACGCTGAACCAGAACCAGATCCATTGATGGAGTCTATTGTAGTAGTCAGCAATGATAAAATAGAATCAAAGCACGAATCTTTAGAAGAAAAGGATGATGATGATACAAACGATGGCGACGATGACGgtactaactttgacgatgaagaAGCTTACAAAGATGAACCTAACGATGAAGTTGATTGTGATACCGAAAGCAATCTCGATGAAAGTGAAGTGAGCTTAGATGGATATGATGGAAAACGCCCTAGAGTTGGCCACATATATAAATTAATCGGACATTTGAAAAATCATCCAAATCTTTGGAATTGTCAAGTGAAATCACGCAATACAACAAAGGAACGACAAAAAGGATATGAAAAATGTGAATATTGTGCAGTAGTTTTTGAGACAGTTAAGGGTCTTAATAAGCATATTAGAAAAATACACGCTGATAAACCACAACCCGCCACACATCCAGCAAAAAAGAAACCAACAGAACGTACTTGTGAATTTTGTGGACGCCAGTTCACACAGAATCAAACTTTGCAGACTCATAGAAAAGCTGTTCATTTGCAATTGCGTCGGTATCCTTGCAATGAGTGTCCGAAGGCTTTTAAAGACAGAGGAACATTAAAGTCTCACATTAGCAGTACTCATTTAAATGTCCGCAATCACGTTTGCGATATTTGTTCAAAAGCTTTCTTCGATCGCAAAACTTTAAGGCAACATTTACGTTTACACAGTGACGTCATGAAATATGAATGTAAGGTCTGTGGTAATGCATTTAAACAAGCATCTGCTTTATATTCACATATGAAAACACATCAAAGTCAAAACTTAACTGATTCAAGAAGTAACTTTATAACAGCAAGAGATTGTCAGTATGGAGGACGACGAAAATGTGGTGATGTCTATATTTCTCCAGATGTTGAATTTCTTACATTGCATTGTTTATTTTGTGAATTCGATAACAAAGAGTTggacatatttttaaatcatttgaaaaGCAACCATTGGGATCTTGTGTCAGCGAATTGCACAGAATTATTTCCATCGCCAGAAATAGAGACGGGAACGGAGGTGCTACAAGTAAAGTTGGAAGTAGACGAACAAGATGTAAAAAATGAACACCTTGGCCTTCTATGCATAGACACTTTATATTTGACTACAGAAAAAGATGAGGATCTCGATGTAAAAGAAGAATTGTTAGAAGATGGAACTCCAACTGAAAATGACGCAAAGCCAACAGTGAACGCTGAACCAGAACCAGATCCATTGATGGAGTCTATTGTAGTAGTCAGCAATGATAAAATAGAATCAAAGCACGAATCTTTAGAAGAAAAGGATGATGATGATACAAACGATGGCGACGATGACGgtactaactttgacgatgaagaAGCTTACAAAGATGAACCTAACGATGAAGTTGATTGTGATACCGAAAGCAATCTCGATGAAAGTGAAGTGAGCTTAGATGGATATGATGGAAAACGCCCTAGAGTTGGCCACATATATAAATTAATCGGACATTTGAAAAATCATCCAAATCTTTGGAATTGTCAAGTGAAATCACGCAATACAACAAAGGAACGACAAAAAGGATATGAAAAATGTGAATATTGTGCAGTAGTTTTTGAGACAGTTAAGGGTCTTAATAAGCATATTAGAAAAATACACGCTGATAAACCACAACCCGCCACACATCCAGCAAAAAAGAAACCAACAGAACGTACTTGTGAATTTTGTGGACGCCAGTTCACACAGAATCAAACTTTGCAGACTCATAGAAAAGCTGTTCATTTGCAATTGCGTCGGTATCCTTGCAATGAGTGTCCGAAGGCTTTTAAAGACAGAGGAACATTAAAGTCTCACATTAGCAGTACTCATTTAAATGTCCGCAATCACGTTTGCGATATTTGTTCAAAAGCTTTCTTCGATCGCAAAACTTTAAGGCAACATTTACGTTTACACAGTGACGTCATGAAATATGAATGTAAGGTCTGTGGTAATGCATTTAAACAAGCATCTGCTTTATATTCACATATGAAAACACATCAAAGTCAAAACTTAACTGATTCAAGAAGTAACTTTATAACAGCAAGAGATTGTCAGTATGGAGGACGACGAAAATGTGGTGATGTCTATATTTCTCCAGATGTTGAATTTCTTACATTGCATTGTTTATTTTGTGAATTCGATAACAAAGAGTTggacatatttttaaatcatttgaaaaGCAACCATTGGGATCTTGTGTCAGCGAATTGCACAGAATTATTTCCATCGCCAGAAATAGAGACGGGAACGGAGGTGCTACAAGTAAAGTTGGAAGTAGACGAACaagatgtaaaaaatgcaaACGATATTAAACTGAATGAAGCCGATCCCCTAATGACAGAAGAAAAGCCTCAAAAGACAGATGTGGACAAATTGATGATGAAGACCGAATCCAATGAAAGCGACGACGAAGATGAGCTTCCACTTAGCGGTTTAGTCGAAAAggatacaaaatataaaagcgaAACACAAGATGGACGTCCAAAACTGATACAtatgtttaaaattattgaCTTATTGCAACAGCATCAATCATTATGGAATTCAAAATTACCTTCGAATTACCTTCGTGCCGAACGGCAGCAAGCAATACAGATTGTTTCTAATTTGGTGAAACATATAGAAAGGCGCCATCAGGATAATGATGTTCCACAAACTTGTAAATTGTGTGGAGAAGTTCAGCCATCTCTGAGTCATCTAAAAATTCATTTACGTCGCACGCACTTACGCTATGAATGTGATTTTTGTGATGAGGTTTGTGCTACGTTTAAATCGCTTAATAACCACATTGGAAAAGTGCATAAGGATAAAGTGCAATTGCCAAATTTGCAAAAGGAAAAGGAAGTGCTTAAATCCAGAATCACCAAAttagaaaatgattttctttCTGCTGATAAGGACCGCGTTCGGAATGACATTGTTGTTTCGTCTGAGAAAGAGTTGATTGGCGATGATCCAGTTGCGTCTATGTTGAATATTGCATCTGATGTTAAGGTGAGTTTGTCTGTTGCTGATATTACGGCTGTCTCGATCTTGAAAAGTTACAGTGTCACTGACAAAGCTGGGACTCCGCAtgataaagttgttttaaagtATTCTTTACGGAATGCTTTGAGAAGAGatgagattttaaaaaataaaaaacaactaaaagaTTCTGCAACGTTCAAACGTGTTTCCATACGTGAGGCCCTGCCAAAACATTCACTGGAATTGTTGAATTATGCCAATAGCCTCCGCGAAGTAGGATACGCGTCTGTCTATTCGTCTTATGGGCGCATCTTCACTAAATTCAAAGTTGATGATAAACCGGTGCTGCTAAGAATAAAACCGAAATTGAtcgtttgttaa
Protein Sequence: MCSLTTFSNSHLKSTNEQFFFDRRKCGNVYVSLDAKLLTLHCLFYTLYLTTEKDEDLDVKEELLEDGTPTENDAKPTVNAEPEPDPLMESIVVVSNDKIESKHESLEEKDDDDTNDGDDDGTNFDDEEAYKDEPNDEVDCDTESNLDESEVSLDGYDGKRPRVGHIYKLIGHLKNHPNLWNCQVKSRNTTKERQKGYEKCEYCAVVFETVKGLNKHIRKIHADKPQPATHPAKKKPTERTCEFCGRQFTQNQTLQTHRKAVHLQLRRYPCNECPKAFKDRGTLKSHISSTHLNVRNHVCDICSKAFFDRKTLRQHLRLHSDVMKYECKVCGNAFKQASALYSHMKTHQSQNLTDSRSNFITARDCQYGGRRKCGDVYISPDVEFLTLHCLFCEFDNKELDIFLNHLKSNHWDLVSANCTELFPSPEIETGTEVLQVKLEVDEQDVKNEHLGLLCIDTLYLTTEKDEDLDVKEELLEDGTPTENDAKPTVNAEPEPDPLMESIVVVSNDKIESKHESLEEKDDDDTNDGDDDGTNFDDEEAYKDEPNDEVDCDTESNLDESEVSLDGYDGKRPRVGHIYKLIGHLKNHPNLWNCQVKSRNTTKERQKGYEKCEYCAVVFETVKGLNKHIRKIHADKPQPATHPAKKKPTERTCEFCGRQFTQNQTLQTHRKAVHLQLRRYPCNECPKAFKDRGTLKSHISSTHLNVRNHVCDICSKAFFDRKTLRQHLRLHSDVMKYECKVCGNAFKQASALYSHMKTHQSQNLTDSRSNFITARDCQYGGRRKCGDVYISPDVEFLTLHCLFCEFDNKELDIFLNHLKSNHWDLVSANCTELFPSPEIETGTEVLQVKLEVDEQDVKNANDIKLNEADPLMTEEKPQKTDVDKLMMKTESNESDDEDELPLSGLVEKDTKYKSETQDGRPKLIHMFKIIDLLQQHQSLWNSKLPSNYLRAERQQAIQIVSNLVKHIERRHQDNDVPQTCKLCGEVQPSLSHLKIHLRRTHLRYECDFCDEVCATFKSLNNHIGKVHKDKVQLPNLQKEKEVLKSRITKLENDFLSADKDRVRNDIVVSSEKELIGDDPVASMLNIASDVKVSLSVADITAVSILKSYSVTDKAGTPHDKVVLKYSLRNALRRDEILKNKKQLKDSATFKRVSIREALPKHSLELLNYANSLREVGYASVYSSYGRIFTKFKVDDKPVLLRIKPKLIVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -