Csim034988.1
Basic Information
- Insect
- Calliopum simillimum
- Gene Symbol
- hang
- Assembly
- GCA_951812925.1
- Location
- OX638372.1:35488266-35513080[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.075 9 8.2 1.3 3 23 244 265 243 265 0.93 2 19 0.57 69 5.4 4.5 2 22 369 389 368 389 0.93 3 19 0.13 16 7.4 3.0 1 22 464 485 464 487 0.90 4 19 0.4 48 5.9 1.9 2 22 527 547 526 549 0.88 5 19 0.0015 0.18 13.5 0.2 3 23 610 631 609 631 0.96 6 19 1.7e-05 0.0021 19.7 0.3 1 23 639 662 639 662 0.97 7 19 0.00016 0.019 16.6 0.1 2 23 760 781 759 781 0.97 8 19 0.0001 0.012 17.2 2.6 2 23 851 873 850 873 0.93 9 19 0.0052 0.62 11.9 0.2 2 23 882 904 881 904 0.95 10 19 0.00061 0.073 14.8 0.2 1 23 917 940 917 940 0.98 11 19 0.00016 0.019 16.6 1.1 1 23 1000 1022 1000 1022 0.99 12 19 0.0025 0.3 12.9 0.9 1 23 1030 1053 1030 1053 0.96 13 19 0.078 9.4 8.2 0.1 2 20 1061 1079 1060 1079 0.95 14 19 2.7e-05 0.0032 19.1 0.2 3 23 1158 1178 1157 1178 0.98 15 19 2.3e-05 0.0027 19.3 0.3 1 23 1213 1235 1213 1235 0.97 16 19 0.00017 0.02 16.5 0.5 2 23 1288 1310 1287 1310 0.92 17 19 3.3 3.9e+02 3.0 1.1 2 20 1330 1348 1329 1350 0.90 18 19 0.0049 0.59 11.9 0.7 3 23 1365 1385 1365 1385 0.99 19 19 0.00041 0.049 15.3 0.7 1 23 1643 1665 1643 1665 0.98
Sequence Information
- Coding Sequence
- atgaccGAGGAGCATACGCAGCGACCGTCGCGACAAAATTGCTGTCGCCTCTGCTTGGCTCCCGATAGTGAATGCATTTCTATATTAAATAGTTATGCGGCGGATAAGGAACCTTTGGCTACGAAAATCTTGCATTGCGTAAACATCAAGATTTCATCAAATGATGGCCTTTCATTGCGCATTTGTCATGCTTGCATCAGTTACTTAAACTCTTGGCAAAGTTTTAAGAATCGTTGCGTTGCTTCACAGGGAAAGCAAATGAATTGGTTAGAATATACCAAGCGTCAACAATTACTTGATAATAATGTTAGCAtttcaacaataacaacaaagtcATCGAGTAGACAACAGCAACAtaggcaacaacagcagcagcaacacttgGAACGAGAACATTTTCATCAAGAATCAAGTTTGCCTTCATCAATTTTGGATGGAATTACATCGCTGAAGAAGCGTAAATCATTAACCGTTTATccCTTGCCTGCGGTTCAAGTCAAAGATGAACCAATGGATGAAGAAGATTATGATACTATGAAACATCATGATGAATCCGATGAAATGGTTGACCCAACATTATTTCTTGAGCGCACCGAAGAAGAAGGCACCGAACCGTATATGGACACCAGCAATTTCAGCTATGATCTTTCGCGTTTGGGCAATAATAGCCATGTACGTGATAGAACAACGATCGAAGTTGCTGCCGCTGTCGAAGTTAAAGAAGCTTCATGCCGTGCctgcaatttgaaattttcaacacGTGCAAATGCACGTCGTCATGAGCGTAACTTACATCCAAATCTTTTTGAATTGTCCGCTTCAACGCCTAACTCGACGCCAGTTACGAAACCAACTGCCGCACTTGCTGCTGCCCTGGAATTGCAACGTGCTGCAATGAATGCAGCTGCTGAGGCAGCTAAAAAATCTGCTTCCGGCACATTGGCAACACCACAAAAGTTACGTCAAGAAATTGTTAATGCTGTCAATGCAACTGAATCTGGTTTCGATTATGAAAATCCCGAACAATATCAAGAGCTGCTGACAGATGAGAAAATTGTATTCTTACAACAAAATGAAGAATTCTTACAACAATATCAGACAATGACATGCAAGTGCTGCCGCAAATTTTACACCAGCTACAAGAATTTTATGGCACACATGCGTAAGAAGTATGTTACCTTGCCGCGTAATCTCTGTTTCAATTGTTTGAAACTAAATGATTCGAAGGCGTTATTTATATCACATTTGAAAAAACGCAATTGTATTAATTTGTATAAAGTGATGCATGCGCTAATGGCAAAAGTGCCAAGTttcgctgctgctgttgcagcGACAGCTGCGGCGATGCCGGAAAAATTGCGTGCCAAAGAATTGTTGGTCAACAAAATCTATGAGTGCAAACTTTGTTCGAAACATTTCCGTCTTAAGTTGGAATTTCGCTCGCATGTTTACGATGAACATGCCGATGCGCAGAAAAAAGATGTGAACCCAGGACAATGTGGTTTTTGTGGTTTGGATATAGATGATCCATTGGAGCGCAAGCGTCATTATAACAATATGGATTGTATTGTTATTTTGCGTTGTGTAACATGTGATGAGAAGTTCAGCaatcatcaaaagtttttggatcATGTTTATGCCAAACATTTGGTACCTGTAActgagcaacaacaacagcaacaacttcgACAATTGGCAGGCACTGACAATTCGCCGGGTAAAAAGTCGACCGGATTTGCAGGCACCTCATCAGCGGACGAGTCGCGTAGTAGCAACATGCATGTAGCAGCAGCAAAGTCACAATATTTTTCGCGTATGCCCCAAGCATGTCCAATTTGTGGGCAGCAGTATAATAATTACAACAATGTGCTGCGCCATATGGAGTCCAAACATCCGGATCAACTGCCACAAACGTATAAATGTGTGAAATGCGGCACTGGTTATCCGCGCCTCTCCAACTTGCGTGAACACATGCTGTCTTCACATGGAGCCAACAACGAAAAGACGCGGACCACAAGCTTTGAATACATTGTAAATGCCGATGCAGTTAAGTCAATGGAAGGAAGCGGTGGTTCAGGTAGTGGTGCATATACTGGTCGTTATGACTATGTTATGAAGGATTTACTATCAATAACAAATGGTGGGACAACCGcGGAAGATGATAACGATGAGGATGTTGAAAATGCGCCAGTTGTTAAAAAAATGCGCATTGATGATGGCAATAGCAACAATCCGAGCAACTCTGCAGCTGCCAGCAATTTATATAGCAGCTATAAGGAGTGTCCTATTTGTAGCGCCATATTTAGTAACAACATTGGTCTATCTAATCATATGCGTTCACATACTGCAGCTGCTCAAAGtgcggcagcagcagcggccGCAGCTGCGTCAGTATCAGCGAAAGCTGCTGTGGAATCTGCAAAAGCAGTTGAAACGGCAAACAAGGCTAGCACCATTGCTACTAGTACCCCACAAGAAAAGACAACTACACAACAAGCGGTATTTAAACGCAGTCTGGAATTGGCAGCTGACCGTCGCTTTCGACGTATGCGTTGTCGCATCTGCCAGAAACGATTTTCCTCGAAGAAATCATATCGCCGGCACATGTTGGATGACCATCAGATTCGGAATGTGCAGTTTATTAAATGTAAACTTTGTGATGCTGAATTTGCCTATGAGAAAGGCCTTAAGGTGCATATGTTTAAAATACACAACACTTTATTAAAAGATGAAATGATCATAAAGCAATACGAATGTGACATTTGCTCAATTGTTTATCGCACTGAGGAACAATTGCTTATGCATAAAAAGACAGTACATGGCAATGAAAATGCACATCCAGATGACTATGTTGCGCCTGATACGAGTGGACAGAGTGGTGAAGTTAGTAGTGTAGCAGCAACGCCAGCTGATAAATCGGGCACATCCACACCAGTTAGAGCAGTTAGAGCCGCTGTACCCTTAGATAATTCATCTTTAGCAGCTCCACTGTACTGGTATCAATGCAAATATTGTCCTTCAAACTTTAACACTAATAAGAAGCTGGCGATTCATATAAATTCCCATGACGAGTTTGATTCAAATGATTATTCATGTAAAGATTGTGGTAATGTTTACAGTGGCCGTAAAAGTTTATGGGTACATCGTTATAAGAAACATCCCCAAATTGCCGAGCCATCAGAGTGTGTGCTCTGCCGAAAAGTTTTCTTTGACAGCCAAATGCTTGAAAATCATATACCCATTTGCAATCGTAAGCCAATAACAGCCACAGGTGCTGTGGCGGAAAATGCTACACCTCTAAATACATTCTATCGTCACAAAACCGGTGATGACGAAGACGACGATGGCAGTCGTGATATCGCTGACGAAGAGGGTATTCCCGCAGGTACATTGGGTggtggcgaagttgaaattacAGCTATACCGGCAGCTAGTGGTagcaaactaaaaataaaattacctGAAGTTGCTTGCACAATATGCGGACAACGATTTACTGATCAAGAGCTCTTTGCCAAACACATTCAAATACATGAAATGGAATTGTACACCGATAATCCATTGGCAGCTATGTTTGATACTGGACCAGCGGATcctaatcaattttatttggatCGTGTAAATGACAACGGTGAATACGCTTGTGATATTTGTCCGAAAACCTTTACGCAAATGACTGCACTAAAGGTTCATCGGAAATGGCATTTCAGAGGTGATAACAAACAGAACCCAGCCGAAGGCGATCTTTCAGCATCTGCGACCTCACAGACCCACAACCTTCAACATCCACCGGGATTACAAGCAGTGGGTTTAATACCGAATCCGCGCCCTTCAAAATCCCTGAAACGTAAACGCGAACTTAAATGCGAATACTGTCCATCGACCTTCATCAGTAACAATAATTTACGTCGTCACATTTATGAACTGCACAAATCAGAAATATCAAATATGCCGGAACCACCAAAAATTGAAACTGATGATTATTTACACTGCCGCAAATGTGAATTGAAATTCGAAACCAGAAAAGAATGGTTTGAGCATAAGATTTCGGATGCCAGAGTAATGAAACCATACGGACCATTCCAATGGGGTTGCGAGTTATGTGGCGAATATGTGTCACGTAAGGAGAAGTTGATACATCATATACAATCGCATATGAAGGAGAAGAACGTAGTACCTGTCCAAGAGAGAAAAGAACAAGAGTTGAAAATGGCATCATCGGTTGAGTCAGCATCGTCAAAACtgaataacaataataatgaaGGTACAGATCGGGAAAATGATGGTACTGAAAGTAATTCACAAGACTCACAGCAAACAGAAGCAAATGCTGAGGAGTACGATAATGAAACTGAAGTTACTGTTAAAGAAGAATACGAAGAGGACGATGCAGCTGGTGATTATGTAGAGGATGAAGAAGAGGAGGAGGAAGATGATGATGAAATTGATGATAGAGTCGCTGAAGTTGAGGATGGTGAGTGTGATGATGAAAATGGAGGTGAAGTTGAGGGTGAGGTGGAAGAGGAGGATGAAGCCGATGctgaaaatatagaaaatatggATGAAAACGCTAACGACGGACAAAATGGGAATGAAGtggctgatgatgatgatgataatgatgacgaAGACGACGCTGATGATGTCGATGATGACGACGAAGATGATGATGTAGAAGATGATGATTCAAATgaagttaaaacaaaaagatccagtaaaaaaagaagaaagtcTGTCGACACAGCTGAAGGTGAAGATTCTAATTCATATGAAGGAGATGAAGATGATGAAGATAATGACGATGCAGAGCaagaaaatgaagatgaagataTCGACGCTGATGTCGAAGAAGATATTGAAGAAGATTTTGTTGAAAACGATTCTAATGCGGGCGAAAAGCATAAAGCACCTGAGCCAAAGGCACGTTTCTCTTGCGATCTTTGTCAAGTTTTCTTTGACACACAACAAGAGTTGCAAAAGCATGTAAAAATACACTTTCTCAATGGACCGGGATCAGTTACACTAACAGAAATCCGAGCCAAAAGAATGCACAAAAGTCGTAGCAGTGGCAGCAGTGATGTTGTAGCTGTGTCATCGTCTTAA
- Protein Sequence
- MTEEHTQRPSRQNCCRLCLAPDSECISILNSYAADKEPLATKILHCVNIKISSNDGLSLRICHACISYLNSWQSFKNRCVASQGKQMNWLEYTKRQQLLDNNVSISTITTKSSSRQQQHRQQQQQQHLEREHFHQESSLPSSILDGITSLKKRKSLTVYPLPAVQVKDEPMDEEDYDTMKHHDESDEMVDPTLFLERTEEEGTEPYMDTSNFSYDLSRLGNNSHVRDRTTIEVAAAVEVKEASCRACNLKFSTRANARRHERNLHPNLFELSASTPNSTPVTKPTAALAAALELQRAAMNAAAEAAKKSASGTLATPQKLRQEIVNAVNATESGFDYENPEQYQELLTDEKIVFLQQNEEFLQQYQTMTCKCCRKFYTSYKNFMAHMRKKYVTLPRNLCFNCLKLNDSKALFISHLKKRNCINLYKVMHALMAKVPSFAAAVAATAAAMPEKLRAKELLVNKIYECKLCSKHFRLKLEFRSHVYDEHADAQKKDVNPGQCGFCGLDIDDPLERKRHYNNMDCIVILRCVTCDEKFSNHQKFLDHVYAKHLVPVTEQQQQQQLRQLAGTDNSPGKKSTGFAGTSSADESRSSNMHVAAAKSQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGTGYPRLSNLREHMLSSHGANNEKTRTTSFEYIVNADAVKSMEGSGGSGSGAYTGRYDYVMKDLLSITNGGTTAEDDNDEDVENAPVVKKMRIDDGNSNNPSNSAAASNLYSSYKECPICSAIFSNNIGLSNHMRSHTAAAQSAAAAAAAAASVSAKAAVESAKAVETANKASTIATSTPQEKTTTQQAVFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLDDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIIKQYECDICSIVYRTEEQLLMHKKTVHGNENAHPDDYVAPDTSGQSGEVSSVAATPADKSGTSTPVRAVRAAVPLDNSSLAAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIAEPSECVLCRKVFFDSQMLENHIPICNRKPITATGAVAENATPLNTFYRHKTGDDEDDDGSRDIADEEGIPAGTLGGGEVEITAIPAASGSKLKIKLPEVACTICGQRFTDQELFAKHIQIHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDICPKTFTQMTALKVHRKWHFRGDNKQNPAEGDLSASATSQTHNLQHPPGLQAVGLIPNPRPSKSLKRKRELKCEYCPSTFISNNNLRRHIYELHKSEISNMPEPPKIETDDYLHCRKCELKFETRKEWFEHKISDARVMKPYGPFQWGCELCGEYVSRKEKLIHHIQSHMKEKNVVPVQERKEQELKMASSVESASSKLNNNNNEGTDRENDGTESNSQDSQQTEANAEEYDNETEVTVKEEYEEDDAAGDYVEDEEEEEEDDDEIDDRVAEVEDGECDDENGGEVEGEVEEEDEADAENIENMDENANDGQNGNEVADDDDDNDDEDDADDVDDDDEDDDVEDDDSNEVKTKRSSKKRRKSVDTAEGEDSNSYEGDEDDEDNDDAEQENEDEDIDADVEEDIEEDFVENDSNAGEKHKAPEPKARFSCDLCQVFFDTQQELQKHVKIHFLNGPGSVTLTEIRAKRMHKSRSSGSSDVVAVSSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972414;
- 90% Identity
- -
- 80% Identity
- -