Basic Information

Insect: Calliopum simillimum
Gene Symbol: -
Assembly: GCA_951812925.1
Location: OX638372.1:109863823-109880794[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.9e-06 0.00023 22.7 2.9 1 23 203 225 203 225 0.99

2 17 4.7e-07 5.7e-05 24.6 1.2 1 23 231 253 231 253 0.97

3 17 0.00057 0.068 14.9 0.0 1 23 259 281 259 281 0.96

4 17 0.00012 0.015 17.0 3.2 1 23 287 309 287 309 0.98

5 17 5.1e-05 0.0062 18.2 3.5 1 23 315 337 315 337 0.98

6 17 0.0015 0.18 13.6 0.6 1 23 343 365 343 365 0.95

7 17 3.4e-06 0.0004 21.9 0.2 2 23 659 680 658 680 0.95

8 17 1.5e-05 0.0018 19.9 0.5 1 23 702 724 702 724 0.97

9 17 8.1e-06 0.00098 20.7 0.8 1 23 733 755 733 755 0.99

10 17 1.6e-06 0.00019 22.9 1.4 1 23 761 783 761 783 0.99

11 17 2.9e-06 0.00035 22.1 0.5 1 23 789 811 789 811 0.98

12 17 7.8e-06 0.00094 20.7 0.3 1 23 817 839 817 839 0.95

13 17 0.29 35 6.4 0.5 1 23 845 867 845 867 0.95

14 17 0.0001 0.012 17.2 0.6 1 23 873 895 873 895 0.96

15 17 0.00022 0.026 16.2 1.2 1 23 901 923 901 923 0.99

16 17 9.8e-07 0.00012 23.6 1.0 1 23 929 951 929 951 0.99

17 17 4.7e-05 0.0056 18.3 0.6 1 23 957 979 957 979 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.9e-06	0.00023	22.7	2.9	1	23	203	225	203	225	0.99
2	17	4.7e-07	5.7e-05	24.6	1.2	1	23	231	253	231	253	0.97
3	17	0.00057	0.068	14.9	0.0	1	23	259	281	259	281	0.96
4	17	0.00012	0.015	17.0	3.2	1	23	287	309	287	309	0.98
5	17	5.1e-05	0.0062	18.2	3.5	1	23	315	337	315	337	0.98
6	17	0.0015	0.18	13.6	0.6	1	23	343	365	343	365	0.95
7	17	3.4e-06	0.0004	21.9	0.2	2	23	659	680	658	680	0.95
8	17	1.5e-05	0.0018	19.9	0.5	1	23	702	724	702	724	0.97
9	17	8.1e-06	0.00098	20.7	0.8	1	23	733	755	733	755	0.99
10	17	1.6e-06	0.00019	22.9	1.4	1	23	761	783	761	783	0.99
11	17	2.9e-06	0.00035	22.1	0.5	1	23	789	811	789	811	0.98
12	17	7.8e-06	0.00094	20.7	0.3	1	23	817	839	817	839	0.95
13	17	0.29	35	6.4	0.5	1	23	845	867	845	867	0.95
14	17	0.0001	0.012	17.2	0.6	1	23	873	895	873	895	0.96
15	17	0.00022	0.026	16.2	1.2	1	23	901	923	901	923	0.99
16	17	9.8e-07	0.00012	23.6	1.0	1	23	929	951	929	951	0.99
17	17	4.7e-05	0.0056	18.3	0.6	1	23	957	979	957	979	0.98

Sequence Information

Coding Sequence: ATGGAAACAGATATTGATATTGGAGAAGCATTATCATCAAATGCTTCAACGTTGAGCCACAATGTGATGGTACTATTAGATGAAAGTGACCCAAAATCATTGGAATCGACCCAACTAAAAACTACTTCAAATCAAGAAAACTGTTCGGGGAGTATTGAAGaaatttcattaaaaatatgcGAAATGTTGACTATCCTCGTGCCACAAGTGCCTATTTGCAGCAGTGATATTTTGCCTAAGTCTATTTGTTCATCTTGTTTGGATAAACTTTTTACTGCATACGAATTTCAGGAAATGTATATTGCCTCAGATGAATACCTGCGCAGCTTTTTGGAGTCCCAAAGTGTACAACATGAATCAGTCTATATTGAAGAAGATAGTTTGCAAGCATCGAAAATCATCAATATTATTGAAATTGTAAAAGACGAAATAAATGATCAAGTTGTCGCATCAGATTCACAAGAAGGTGAAGATGAAGTTATAACTGAAGGGATAAATAATTTTCAGGAGAAtgtaaaatttaatcaaatcgATAGTGATGAAAAAATTGATTACAATTTGGCAAGGCTCAACGAACACATGAATAAGCATAATGGCATCAAGCCATTTGAATGTGAAATTTGCGAAAAATCATTCCATCAGAAAAAAGCACTAAGCACTCATATGCGTACACACAAGGATAGACGGCGTTTCAATTGTGTTCACTGTGGGAAAGCTTTTAAAAGTTCCGGCAACTTAAGCCAACATATGATGATTCATGCGAATCTGAAGCCATACCTTTGTGATATGTGCGGTGCCAGCTTTGCTCGTGTTGCTGCATTGGAACAACATAAACTAACGCATTCTGATGAACGCCCTTACAATTGTGATGAATGTGATAAGTCCTTTAAACTTTTATGCCAAATAAAACGCCATATGAAAATTCATGCGGGCGAAAAACTTCACAAATGCCAACTATGCGAACGATCATTTACGGAAAGTATCGATTTAAAAAAGCATTTACGCAAACATATTGGTCGAAAAGTTTATAAATGTGAAAAGTGTGCAGAAGCATTTGAATTCAAGAAAGAACTGCAAAAACATGAATTGGATCATTACAAAGAGGATCAGCAGAAGCGAGaacaaaattcacttaaatcTGAGCTGAATATAGATTCAGAACATccagatataaaaaaatcaaaggtTTCCTCCATCGAAGAAACAAATTTATCGGTGTCTGCGTTGCGGCCACTAAAAAACGAAGAGATTAAACCATTGGACCCAACAATTACTGTTTCAAATGAATCTTGTGTAGTTGCCCCAAATGCTTCTAAAGttatgaataCCCCAGCAGATGCAACATTCAAGCAAATGTGTCGCGCTTGTATGTGTAAGGATGATGAAAACTTCCGCTCCATCTACGATCTAACAGAGGAGAAGTCAttaaaaataagtgaaatgttGAACACAACCATACCCagaattttaatttgtgaaagtgatcaattaccaaaattaatatGTGCATCTTGTTTGGACAAACTTATTAGCGCCTTTAAGTTTCAAGAAATTTGTATCGCCTCAGATGAATACATGCGCAACATATTGGcaccaaaaataataattcctaTTACACATGAATCAGTATGTTTGGAAGAAGCTCCTCTGCACGCAGAAGAATTTATTAACGTTCATGAAGAAAGTGTAAAAGTCGAAATGAACAACGATGAGGATGTGGTTACAACTCGCCAAGGATCATCGGTTGCTATGCAGAAAGATCCTCTACTAGCAGGAGAGATAAATAAAATACCGAACAATATAAAAACTGAAATGAACGATGAAGAGTTAATTGATATTGATTTGGTTAAACCTACGGATGCACAAACACCTAAAATTATCATGGAAATCTCTGCTCACGATGATAATAGCATATCCAGCACAGCAGCCTACAGTGCAAGCTTGAAAAGACCATCCACTTGCGATAGCAATTTATCCTGCCCAGATTGCGATAAAACCTTCGATACTGCTCGTAGTTTGAGACGTCACGCAAGCATTCATACGCAGGCAAGCAAGCAACAAGTCACTGGCATGACAGAGATATCGCCAACACAACCAAAAAGTCATAAATGTCCCGAATGTCCGCGACGCTTTAGGAAAAGCGTATCATTGGCTGCACATATTGAGCAGCATCGTAAGTCTGAATCAGATCCAGTTTTCAAATGTGATTTATGTCCAAAGAAATTTAGTAAATATCCAAATCTTGCGCAACATGCGCGCACCcacaaagaaaatcaaaaatttaaatgcaacGTTTGTGAGAAAACATTTGCAAGAACATCAAAACTTGCCGATCATATGAAAAGGCACAATGGTTTGAGACAATTTCCTTGCGAGAACTGTGATAAAGCATTTTATACAAAAGTCGCACTGAAATCACATCAGCGTTTACATACGGGCGAAAAACCCTTCCTTTGCCCACAATGTGGCAAAGCTTTTGTTGGTGCCGGCAATTTACATCAGCACATGCTACGTCACTCCAATGAAAAACGTTATCAATGTCCTGAGTGTCCTGATAGATTCACCTGCCTATCTGATCGTTCCATACACATGGCTATACATCGTGAGATTAAACGACATGTCTGTGACATTTGCGGTTCCAGTTTTACGCGAGCGTTTACactggccaaacataaaatcGTGCATACTGGCGAGCGTCCATTTAAATGTGAAGAATGCAATATGACGTTTGTATATATTGAGCGCATGAAACGTCATATGCTTACGCATACTGGTGAAAAACGCTACAAATGCAAGTATTGTGACCGAGCCTATACGGCGAGTGGTGATTTGAATAAGCATTTAAGAACGCATGTTGGTGAAAAAACGTATATGTGCCAACAATGTCCCGAAGCGTTCAAATATCAAACTGAATTGCGTGAACATGTACGCTATCACTATAagttgcagcagcaacaagagCGAGAACAACAGAAGGGTGCTGAGGAGGCGACAGAATCTAATGTAGCATAg
Protein Sequence: METDIDIGEALSSNASTLSHNVMVLLDESDPKSLESTQLKTTSNQENCSGSIEEISLKICEMLTILVPQVPICSSDILPKSICSSCLDKLFTAYEFQEMYIASDEYLRSFLESQSVQHESVYIEEDSLQASKIINIIEIVKDEINDQVVASDSQEGEDEVITEGINNFQENVKFNQIDSDEKIDYNLARLNEHMNKHNGIKPFECEICEKSFHQKKALSTHMRTHKDRRRFNCVHCGKAFKSSGNLSQHMMIHANLKPYLCDMCGASFARVAALEQHKLTHSDERPYNCDECDKSFKLLCQIKRHMKIHAGEKLHKCQLCERSFTESIDLKKHLRKHIGRKVYKCEKCAEAFEFKKELQKHELDHYKEDQQKREQNSLKSELNIDSEHPDIKKSKVSSIEETNLSVSALRPLKNEEIKPLDPTITVSNESCVVAPNASKVMNTPADATFKQMCRACMCKDDENFRSIYDLTEEKSLKISEMLNTTIPRILICESDQLPKLICASCLDKLISAFKFQEICIASDEYMRNILAPKIIIPITHESVCLEEAPLHAEEFINVHEESVKVEMNNDEDVVTTRQGSSVAMQKDPLLAGEINKIPNNIKTEMNDEELIDIDLVKPTDAQTPKIIMEISAHDDNSISSTAAYSASLKRPSTCDSNLSCPDCDKTFDTARSLRRHASIHTQASKQQVTGMTEISPTQPKSHKCPECPRRFRKSVSLAAHIEQHRKSESDPVFKCDLCPKKFSKYPNLAQHARTHKENQKFKCNVCEKTFARTSKLADHMKRHNGLRQFPCENCDKAFYTKVALKSHQRLHTGEKPFLCPQCGKAFVGAGNLHQHMLRHSNEKRYQCPECPDRFTCLSDRSIHMAIHREIKRHVCDICGSSFTRAFTLAKHKIVHTGERPFKCEECNMTFVYIERMKRHMLTHTGEKRYKCKYCDRAYTASGDLNKHLRTHVGEKTYMCQQCPEAFKYQTELREHVRYHYKLQQQQEREQQKGAEEATESNVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -