Csim016812.1
Basic Information
- Insect
- Calliopum simillimum
- Gene Symbol
- CSRNP3
- Assembly
- GCA_951812925.1
- Location
- OX638369.1:54406660-54414873[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 4.9e+03 -1.5 0.2 46 82 41 77 21 110 0.56 2 2 1.4e-95 6.2e-91 305.4 10.5 2 217 451 652 450 653 0.92
Sequence Information
- Coding Sequence
- ATGTTTAGACCTATTAAAAATCTAATAACTTATATACAAAAGAATGCTAGCGGTACGTCAATATTTGGTGGATCGACAGCGGAAGCAGAAGTAATTCCAGAAACTGAAACCGATGCAACACAAGTTAAAGAAGCTTATGAAGAAGAAGATTTAAATTCAAAAGAAGAATCAAGAAAAAATTCAGGAGAAATGGAAGTCAGCGATATTAATCATAAATTAAGTGTTGGTGATAAAACCACAAATTTACCATTGGTAGTCATTTTGCATGATGATGAAGATGAGAAAGTATGCGACGATGGTGaagaaattaaaacaacaacaaagttacCATTCACCAATTTGGATGAAGATGATGACAttgaaatgcaaataaaaagcaCTACTGTTTTGCGCAAACCTATTGAAAAAACGACAATTATAGATATCACAGTTGATGACGATTATCATCATGCCGATAAGGATTCTACATCGTCTCTGGCGACTGTCATCAATAAGAATGCAACCAAAAACCGTGATCATAATCAAAATCATGAAATCATCGTTGATGATGAATTGGAACATTTTCGCCATGATCCAACGGCAGTGATTATTGAGGATTTTTGTTCTGTTGGCAGTGACAGTGCCGCGGAAGAGGATAATGAGGACGCACCATTTTTGGACTTGACAAATGAGCTAGATGAAACGCTTCCAAgcgaAGTAATTGTGGTTAACGAACCAGACTTAAACTCTTCCATAAATTCAGATGCATTGTCTGAAGATCCTTTGGCAATTGATGAAGGAATTGCTGCACAACATCATACTGCGAAAATTAGCAGTGACAACAACAATCCTTTGGATACACATCACACTGAATCATCATCGGGTGATATACTTTGGATAAATATTGATGATATAAAATGTGTTATAACACAAAAAGATTCTTGCGAAAGTACACCAACAACTACACCGCTTAAAGAAGTTGATGTAGTTGATGCTGCTACTACTTCTGCCGCTGCAAGCTGCTCTAAAAACCTAACTAATACTTTAAATGAAACCAATACTTTAAACGAAACTACTAACTCTGCCATTGAAGAAGCACATGCAGCAGAGGAATTACGTGGCGATGGTTCTGATTCTGGTTTAGGTTCAGAAACATCAATCCTACAATCGACGCTCACGAGCAGCACTGCAGATACAAGTCTAGCTAGTAGTGCTGCGCCGACTCCTGCAAAAACATTACGCTCTAATCTAAAGCGTCGTCTCGAAACAAACGAAGATGATTCATTTGATTCAACCGGCGGTACTATTGAATTGAGCTCCGCCGTGTCTAATGCTGCCGTCGCCGCTGGTGCAAATACAAATCAAAAGAAACCTAAacgttcaattaattttgagaaCGTGCAAGTTTACTATTTTCCACGTCAACAGGGTTTCGGTTGCGTACCGTCTGCCGGTGGTTGTACACTGGGTATGGGTGCACGTCATATTTCCTGTAAGACGCTCACTTTGACAGAGCATGCGGCAGAATTGCGACGAGCACATCGACAACAATTGCAAGATGTTAATCCGCGCGGTTCATCAAGTGAAGAGAGCGAAGAAAGTGAAGAGGATTATTTGAGTGAGGGCAGTGGCTCTGATTTAGATGCTGAATCGAGTGGTTTTCTGCAACCTGTATCGCCTAAGCAGCGACGTGCTTTACTTAAAGCTGCAGGCGTGCGTAAAATTGATGCCAGTGAAAAGGTTGAATGTCGTGATATACGCAATTCGCGTGAGGTGTGTGGTTGTACATGTAGAGACTTTTGTGATCCCGAAACGTGTGCATGCAGCCAAGCTGGTATTAAGTGTCAAGTTGATCGTGCAATGTTCCCTTGTGGTTGCTCGCGTGATGCATGTGGCAATACTGTCGGACGTGTTGAATTTAATCCATCGCGTGTACGTACGCACTTCATACACACCATAATGCGCTTGGAAATGGAAAGCCGGCATCAGCAAAAACCGCTATCTActacaaatataaattttggacAATCGTCTTCGTCTATAAACGCTCTTAATCATATGTCTAGTAATTACTATAGTATGCAAACGCAATCTAATTATAGTTCCGGATATGCTTCTCCAGCATATCCCAATGAACAGACGCAGAGTTACTATCAGcaacaaaatcaactttacagtaGAAACGGAACGGATGCATTGGGCCAAACGCATCATCAACCATATCAAGTTGATAGTTGCTTAGAATCAAGTCTCTTTTGTGGCACTGCTGCAGGAACACCCGCTTACGCTGAGTTAATGCCTGCCTATTCGAGTGTTAGCGCGCCCAGTGGAAGTACACCTGCAACGTATCATGCTCCTTTAAGCTATCCTACAGTGCAGAATAGTATATCAACACCGGTTTCCCCATACTCCACATATAATCACTCCACCTCGAATTATCTTCCAAGCAGTAGCAATGGCATTAGTAATAATTCAACGGCCCTTAACATAAGCAGCAGCTACAGTTCGTGTGCTGTTCCATCAGCGCCGCCATTCGGAACAGCAACAACCACAGCAGCATCAACGGACTATCATAGCAGCTGCAATCCTACGCTAgaaactacaactgccgcaacgAGCACTTTAGATATCAACAACAGCAGCGGCAGAAGTACGGTTAACAGTAGTAGTTTTATAAGTTTAAATTCACCAATTTCCAGTTCCTCACGTCTATCAGCAATTAATGATTTACTTCAACATAATCGCAATACAACAGCTGCATTGGTAGCTGTTTCACACACTTCCTCAACAACTTTGAGTAATTTGCTAAGTACCAGCACCACAAATGTTGTACCAACACTTTCAGAAAGCAGCTCTATTGATACACCACCTATAGAGTATACATCGCAAAAAAGTTGCCTGACATTTGAAGAAATTCCAGCGCCACTAAATCCAACGCCTATTGTTGCCGTACTCGAGGATGACCAACAAGAAAACAACTCAAACAATATTGCATTTGACAGTGACACTAATGTATCGTCCATAAAGCCACTACAAACTGAGCCACCACCTGTAGTATCACCTGGCACCATCACCACTGTGTTGGCAGCGGCGGCAACATTAGCACCAATCAAACAATCAGTTGTAGATGTACCCATCATTAATTAA
- Protein Sequence
- MFRPIKNLITYIQKNASGTSIFGGSTAEAEVIPETETDATQVKEAYEEEDLNSKEESRKNSGEMEVSDINHKLSVGDKTTNLPLVVILHDDEDEKVCDDGEEIKTTTKLPFTNLDEDDDIEMQIKSTTVLRKPIEKTTIIDITVDDDYHHADKDSTSSLATVINKNATKNRDHNQNHEIIVDDELEHFRHDPTAVIIEDFCSVGSDSAAEEDNEDAPFLDLTNELDETLPSEVIVVNEPDLNSSINSDALSEDPLAIDEGIAAQHHTAKISSDNNNPLDTHHTESSSGDILWINIDDIKCVITQKDSCESTPTTTPLKEVDVVDAATTSAAASCSKNLTNTLNETNTLNETTNSAIEEAHAAEELRGDGSDSGLGSETSILQSTLTSSTADTSLASSAAPTPAKTLRSNLKRRLETNEDDSFDSTGGTIELSSAVSNAAVAAGANTNQKKPKRSINFENVQVYYFPRQQGFGCVPSAGGCTLGMGARHISCKTLTLTEHAAELRRAHRQQLQDVNPRGSSSEESEESEEDYLSEGSGSDLDAESSGFLQPVSPKQRRALLKAAGVRKIDASEKVECRDIRNSREVCGCTCRDFCDPETCACSQAGIKCQVDRAMFPCGCSRDACGNTVGRVEFNPSRVRTHFIHTIMRLEMESRHQQKPLSTTNINFGQSSSSINALNHMSSNYYSMQTQSNYSSGYASPAYPNEQTQSYYQQQNQLYSRNGTDALGQTHHQPYQVDSCLESSLFCGTAAGTPAYAELMPAYSSVSAPSGSTPATYHAPLSYPTVQNSISTPVSPYSTYNHSTSNYLPSSSNGISNNSTALNISSSYSSCAVPSAPPFGTATTTAASTDYHSSCNPTLETTTAATSTLDINNSSGRSTVNSSSFISLNSPISSSSRLSAINDLLQHNRNTTAALVAVSHTSSTTLSNLLSTSTTNVVPTLSESSSIDTPPIEYTSQKSCLTFEEIPAPLNPTPIVAVLEDDQQENNSNNIAFDSDTNVSSIKPLQTEPPPVVSPGTITTVLAAAATLAPIKQSVVDVPIIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -