Csim008053.1
Basic Information
- Insect
- Calliopum simillimum
- Gene Symbol
- SMARCC2
- Assembly
- GCA_951812925.1
- Location
- OX638368.1:33346997-33351294[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 4.3e+03 -0.8 0.1 34 43 122 131 121 133 0.85 2 2 6.6e-14 1.9e-10 41.9 0.2 3 44 568 609 566 611 0.95
Sequence Information
- Coding Sequence
- ATGCGTTGCTTTCTCGATTTTAAACCTGGTGGTGGACTTTGTGTTATCTTTTCCACTATGTTTCGTTTTCGCGCCGAACAACGTGGCAAGAAATTTGATTTCTCTATTGGGAAAAATCCCACTCGAAAAGATCCGAATATACAACTTTTAATTGATATCGAACAAGCTTTAGTTGAGGCTGACCTCTATCGCATTCCGTACATTTTTATTCGTCATGAAATTGAGAAATCGTTTGCTACACGCCTGCGGGAAATTCTCTCAACACGTCGTGTTGAAATCGTTACCGATGAGGATGATGCTACGCATATAATTTATCCTGTTGTTGATCCACATCCTGACGAATATGCACGTCCAATTTTTAAACGTGGCAATCATGTTATGTTGCATTGGTATTATTTTCCTGAATCATATGATACTTGGGCTGTTAACTCATTTGATTTGCCTGAAAACGTACCAGATAATCCTGAATCTCCAGCAGAACGTTGGCGTGTTTCACGTGTTTCAGCCTCTTGGATATTGGACTTGGAAACATACAATGAATGGATGGTCGAGGAAGACTATGAAGTCGATGAAAATGgcaagaaaaaaatgcacaaGCATCGTTTGTCCGTTGATGATATTATGTCATTTGCCGATGAAAAAAAGAAGTCAAGCTCTACAAGCGGTGGTAGTAGTAGCGCTAAGCAAAAGCGTCGGCGTTCCCCATCACCATCATCTACTACAAAACCGGGAAAACGTAAGCGTTCACCGGCGGTATTGCATAAAAAGACACgcaatgatgacgatgatgaagaTCTGACACGTGATATGGATGATCCGCCAGCAGAACCTAATATACAAGAAGTGGTAAAGTCCTCCTCACTACAGTCCACAGCTAGTCCAGCGCCAGCAACGAAAACGCGTGGTGATAATGATATGATGCCAATAAAGGGCGGTACCATAACTGATTTGGATGATGAAATGACTGGTGGCAGTGCTGCAAACGTACTTTCTACTTGTGATGGTGAAAATTCACAAACAGGAAAGACAAGCGACAATAGTAACACCCAGGAATTTTCATCCTCTGTTAAAGAGGATATGGAAGATAATGTGACAGAGCAAACTCATCATATTATAGTTCCATCATACTCTGCTTGGTTTGATTACAATTCAATACATGTAATTGAGAAGCGTGCGATGCCAGAGTTCTTTAACAGCAAGAACAAATCGAAAACTCCTGAAATATATATGGCTTATAGAAATTTTATGATTGATACTTATAGgcTTAACCCTACGGAATATTTAACAAGCACAGCATGTCGTCGCAACTTAGCTGGTGATGTATGTGCTATTATGCGTGTACATGCTTTTCTCGAACAATGGGGTCTAATCAATTATCAAATTGATGCTGATTTACGCCCTACACCAATGGGTCCACCTCCTACTTCACATTTCCATATACTTTCTGATACCCCATCTGGGTTACAAGCGATTAATCCACAAAAAACTCCACAACCATCTGCAGCTAAAACTCTGCTGGATTTAGATAAGAAGGACAAAAAAGAAGGTTCTGTAGAAGCTGACAAACCAGGTGGTGGTATTAATGTTAAAACCGAACCTATGGAAAATGGTTCTACCACTGGTCAGTTTGGTTTGAAACTAGATCAATATGCTAAAAAACCAGCAGCAATGAAAAATCGCACTGCAGCCAATATGGCTCGAGAATGGACTGATCAAGAAAACTTATTATTACTGGAGGGTTTGGACATGCATAAGGACGATTGGAATAAGGTGTGTGAACATGTTGGCACGCGTACTCAAGATGAATGCATTCTGCATTTCTTACGTTTACCAATTGAGGATCCCTATTTAGAGGAAGATGGCGGTTTTCTAGGACCACTTGGATGTCAACCGATACCATTTAGCAAATCTGGTAACCCCATTATGTCGACAGTTGCATTTTTAGCTTCAGTGGTTGATCCCAGAGTAGCAGCAGCTGCGGCAAAAGCAGCAATGGAAGAGTTTGCAGCAATCAagGATGAGGTTCCTGCTACAATTATGGATAATCATATGAAAAACGTAGAAAAAGCATCAGCTACTGGAAAATTCAATCCAACATTTGGTCTAGCAAACAGTGGTATAGCCGGTACAGGTTTGGAAAAAGAGGATGAAGATCAACATACACATGcagcttctacatcacatgatGAAGAGGTGAAAGATATTGCAAAAAAGGAACATgATGATTCTAAATCTAAAACAACTGATGAAAACCTCAAAACAGACACAGAGCCTAAAAAAGAGATTGATAAAAGTAGTGAAGATGCAGAAAAAACTGATCTAAATAAACCATCTTCTTCTAATGCAGACGATAAAGAACTCATAGCCGTAGATCCAAGCGATGGCGGTGGTACAATATCAAAAGAAAATGAAGCAGCTAACCAAGTATTTAATCAGACAAGAGTTCAGACTGCAGCTGCTGCAGCTCTTGCATCAGCCGCCGTAAAGGCAAAACACTTGGCCGCATTGGAAGAGCGTAAAATAAAATCGTTGGTCGCACTACTGGTTGAAACTCAAATGAAGAAATTAGAAATCAAATTACGTCATTTTGAAGAACTTGAGACAACAATGGAACGTGAGCGTGAAGGCTTAGAATATCAGCGACAACAATTAATTACTGAGCGTCAGCAGTTTCACTTGGAACAATTAAAAGCTGCTGAATTTCGGGCCCGCCAACAGGCTCATCATCGACTACAACAGGAACAGCAATGGCAAGGTGGTACTGGCGGTCCTGGTGGTTCTGCAGCTCCTGGTGGTGCACCACCTGGCCAACCTTTGCCAGCTGGCGCAGCTCCAGCAACTGGTGGTCCTCAAATTCCACCGACAGGCAGTGGTCCATCAAGTGGTGTGCCACCTGGTCCAGCTGGTGCTGCGTCACAACAAGCACCTTCTACGGCGGCTGGACCACCAACTGCTCCAGGTATTGTTGGACAACAACCGGCTATAGCAATGGacaCTACACCGTCTACAGCATCAACTGCAATGCCAACTTCTGGAGAAGTATCAGGTGCTCTATCCACTTCTAATCCAATCTCTTCACAACCGTCTGCAGCAGGCGCTACTTTGTCATCCGGTTCTGTTTTAGCAGCAAGCGGACCTACGGCTATGACCCCTAATAATAATAATCCACAAGCTGCACAACCCTAA
- Protein Sequence
- MRCFLDFKPGGGLCVIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIDIEQALVEADLYRIPYIFIRHEIEKSFATRLREILSTRRVEIVTDEDDATHIIYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDTWAVNSFDLPENVPDNPESPAERWRVSRVSASWILDLETYNEWMVEEDYEVDENGKKKMHKHRLSVDDIMSFADEKKKSSSTSGGSSSAKQKRRRSPSPSSTTKPGKRKRSPAVLHKKTRNDDDDEDLTRDMDDPPAEPNIQEVVKSSSLQSTASPAPATKTRGDNDMMPIKGGTITDLDDEMTGGSAANVLSTCDGENSQTGKTSDNSNTQEFSSSVKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTPQPSAAKTLLDLDKKDKKEGSVEADKPGGGINVKTEPMENGSTTGQFGLKLDQYAKKPAAMKNRTAANMAREWTDQENLLLLEGLDMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEEDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASATGKFNPTFGLANSGIAGTGLEKEDEDQHTHAASTSHDEEVKDIAKKEHDDSKSKTTDENLKTDTEPKKEIDKSSEDAEKTDLNKPSSSNADDKELIAVDPSDGGGTISKENEAANQVFNQTRVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGGTGGPGGSAAPGGAPPGQPLPAGAAPATGGPQIPPTGSGPSSGVPPGPAGAASQQAPSTAAGPPTAPGIVGQQPAIAMDTTPSTASTAMPTSGEVSGALSTSNPISSQPSAAGATLSSGSVLAASGPTAMTPNNNNPQAAQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01414914;
- 90% Identity
- iTF_00972125; iTF_01486115;
- 80% Identity
- -