Csim007743.1
Basic Information
- Insect
- Calliopum simillimum
- Gene Symbol
- basR
- Assembly
- GCA_951812925.1
- Location
- OX638368.1:27162763-27166541[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.7 1.7e+04 -2.7 0.0 10 27 216 237 215 257 0.71 2 5 4.4e-12 1.3e-08 36.1 0.5 1 44 264 308 264 310 0.95 3 5 2e-06 0.0058 18.0 0.0 2 43 318 363 317 366 0.85 4 5 1e-10 3.1e-07 31.7 0.0 3 46 374 418 372 418 0.92 5 5 5.3e-13 1.6e-09 39.0 0.2 4 44 427 468 424 469 0.94
Sequence Information
- Coding Sequence
- aTGCCTACCGATGATGAATACACAGAGGAAGTTGGCCAGGACGACGAAAACAATGACAGTGACGAGGAGGAAGAAGACTGCAATGAATCGGGCAGTGAAAATGCTACAGACTATGAAGATGAATATATACTAAGTGCAACAAATGGGTCGCTTATGGAAGAAATAGCTGATATTCTTAGGAACAAAAGCGATATTAATTGCCCCAATGCACTGGCGCTTAACAAACAAATGCAGAAGAACCTTATTAATGTTCGTGACTCAATAGTAAAACTGCTAGAAAGGATTAAAAACAGACTggcatttaatgaaaaaaacctaATGCTTGTAAAAAAGTATAAGCAAAAAGGTGTTGGGATCAGAGGCGCATATTTGAAAGGTGGTACATTCTATTTGAAAGGAAATATGTTCTTTAAGGATGTTAGTTGCCGAAGTTGTCCAAACAATTCAGACTATATACATCGTAGCGAGATAGAACGTGAAATGTTTCCAATGGATTTTGAACTGCGTGGGAGACATGTCTGGTCAATGAGGGATAAATATGATATTGTTCAAGGCATAAAGGAACAGGTTATAGATCATTTAAGTCCCATTTCATCTAAACGTACAAAGCAGGATCAGCTTGATAAGAAAATTGCATTGCAtacagaaaaattgacaaacctTTTGGAAAAAGTGGATGCTAATTTTCGAATCGATTGGAAACTAATTTCAATTTACAACTTAAAGCATCGACATTCACCATCGTCCTCCAAAGCTATGTGGAATGTATATCTTATGCCTGAACTAAAACGCTGTTCTTGGACtaatgatgaaaataaaaaacttctgGAAGCCGCTAAACGGCACAACTACGAAGATTGGAAATCAATTGCAGCAGAAGTGTCACATCGCTCGGATTATCAATGCTTTGTACATTTTCAGACTAAACTTCAAAAGCTTATAAAACGGGAATCCAAATGGACAGCCGCTGATGATAAACGATTGCTAGAAATTGTAAATGCATGTACAGTAAATGGTGTTATTAATTGGAATGCTGTTTGTGTTAGATTTCCAGATCGTTCTAAAAACAGATGTTGCGTACGTTATTACTATACAGTTAATCCAGTTCTAAGTCATGCACCATTTACCGCAGAGGAGGACTTGATACTTTTGGCAGCCGTAGAAGAATATggagaaaattttgcttgcatgcCACGTACACTTTTTCCAAATCGATCAACACTTCAGCTACGTAATCGTTATAAAAATACGCTTTGCCATCGAGATAAAAACAACGGATGGACTCATGAGGAAGACAAAAAATTAATGGATTTCGTGGCGGAACATGGAGAATCAAGTTGGAAGAAATGTGCAGATGAGATTGGCACCCATACAAGAACAAGTTGCCGTGGACGTTTTACTACGAtcacgaaattttttaagaaaaatcctgAAGGAAAACTTGAAGATCTTGTAAGTCGTCCACGTGCTAAAGATAACTGCATCAGTTTGAAGAATTGGACTGAAAAAATTGTCGAAATTCGTAATAATCCCGATGCATGGAAGTCAAAGTCATtagacaaaagaaaaatgaaatcgGAAATGAAGAATAAATTAGTAAAACCTGAAAAACCTGAAAAGTCTGACAAAtctaagcaaaaatatattacgAGACTACGCACAAATGAATTGGAGCTATATAATGCCTTCAAATACGCATACAATTTTAAACTGCTAACTGATCCATGTTGCACGATTTTTACTAGACCATTTTCCCTGGCAGTAGTGCAAAATGCTTGTGGTTTTCAAATCTCTTCGTATCAACGCGTCATAGCTGATAAAACGTTGCCAAGCAATGTGGCTATGAGCTGTTCTAATATGTTATCAATTGCGACGACACATCATGGCTTAGATCAGCACATGGCCGATTTGTGGGGCTATCGATTACCTCCTAATTGGTCAACTTTAATGGGTTTTCGAGCATTGTGTGTTCAATCAAATCAAACGGCAGAATCGAAAACGAAAACAGAGGACACAACAGTTGTTGAAAATAGTGAAGCTGTTAAATTATTTCGGCAACGCTTAAgagttattttatacacaacTGCACTGCTTAGTCGTTTAAATCCTCAAAACGTTAATAATTTAAAGCAAAGAATGGAATATCATCCAATGTCAGCACCATTAGGCCAAACTGAAAGATCTATTATGGCATATGAAATATCTGAGCTGGAACAGATGAATTTTTGTATAGACAATAGCGTTGCAACAAGCCAAAAACAAATAGGTATAGAATCAAATGAACAGGATAATCCTGTTCTATGCACAGATAATAACTCATCATTGAGCCACACACAAATAGATACAAATTCAAAAGTAAAAGAATCATATGAACTATGTGAGCAGAAACACAATGAAAATGGCATAGATTTTAAAGTTCCATTCAGGCCTTGTAAGAAGGACCAAACAATTATGTGTGAAGGTGCTGGTGTACAGACAAATGAGATAAAAAAGGTGTCCAGAAAGAGAATTCTGTGCAAGAGAGATTTGAATAATAAGAAAACTAAGCATATGAAAATTCAAGAAGGACAAATTGTACAAAATTGCCCAGCAGATAGAATTAAAATAGAACTAGAGTAA
- Protein Sequence
- MPTDDEYTEEVGQDDENNDSDEEEEDCNESGSENATDYEDEYILSATNGSLMEEIADILRNKSDINCPNALALNKQMQKNLINVRDSIVKLLERIKNRLAFNEKNLMLVKKYKQKGVGIRGAYLKGGTFYLKGNMFFKDVSCRSCPNNSDYIHRSEIEREMFPMDFELRGRHVWSMRDKYDIVQGIKEQVIDHLSPISSKRTKQDQLDKKIALHTEKLTNLLEKVDANFRIDWKLISIYNLKHRHSPSSSKAMWNVYLMPELKRCSWTNDENKKLLEAAKRHNYEDWKSIAAEVSHRSDYQCFVHFQTKLQKLIKRESKWTAADDKRLLEIVNACTVNGVINWNAVCVRFPDRSKNRCCVRYYYTVNPVLSHAPFTAEEDLILLAAVEEYGENFACMPRTLFPNRSTLQLRNRYKNTLCHRDKNNGWTHEEDKKLMDFVAEHGESSWKKCADEIGTHTRTSCRGRFTTITKFFKKNPEGKLEDLVSRPRAKDNCISLKNWTEKIVEIRNNPDAWKSKSLDKRKMKSEMKNKLVKPEKPEKSDKSKQKYITRLRTNELELYNAFKYAYNFKLLTDPCCTIFTRPFSLAVVQNACGFQISSYQRVIADKTLPSNVAMSCSNMLSIATTHHGLDQHMADLWGYRLPPNWSTLMGFRALCVQSNQTAESKTKTEDTTVVENSEAVKLFRQRLRVILYTTALLSRLNPQNVNNLKQRMEYHPMSAPLGQTERSIMAYEISELEQMNFCIDNSVATSQKQIGIESNEQDNPVLCTDNNSSLSHTQIDTNSKVKESYELCEQKHNENGIDFKVPFRPCKKDQTIMCEGAGVQTNEIKKVSRKRILCKRDLNNKKTKHMKIQEGQIVQNCPADRIKIELE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -