Csim013421.1
Basic Information
- Insect
- Calliopum simillimum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951812925.1
- Location
- OX638368.1:136189803-136202725[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-15 9.3e-12 45.7 0.0 1 45 22 67 22 67 0.97 2 2 1.5e-18 3.5e-15 56.7 0.0 1 43 560 603 560 605 0.95
Sequence Information
- Coding Sequence
- ATGGGCAAATCAAAGACATCACGATCGACACCCGTCCTCCCAGCGGTCGGTCGTCGCACCTATACTGACGATGATTTAAACAGCGCTCTGCAGGACATTATCAGCGGTAAGCTGGGTACTCGCAAAGCATCCGTTTGCTACAATATACCACGTTCCACGCTACGTAACAAAGTTTACAAACTGACTACGGATGCAAAAAGAGCCAATGCCACCGCTCCAGCCGAACTGTTGCAATTGCAGCAAGCACTTGAACTGGAAAAAGATCTCTCTGGTGATGAGGGTGAGGGTGAAAGCAACGCTTCTACACCACAACCAGCTGAGGCATATGATGATCTTGCCACTGCAACATTACGTAAGCTTTGTGAAAACAATACCCGTTCGGAAGACGTAGGTGTAGGGGAACACAATGCCACCGCATCACCAAAAATTGCAGCATCATCTCTTGTATCTGCGCTTAGTGAACAGCTTAAGCGAAAATCTAGCACACCATCATCTGGTGGTGGTGCACAACCACCGCAGCCTACACCATCACCGCAGCCACAAATACCCCCGATTTTAATTGATCCAAATGTTTTTCTGCAGACGCTGTTACTCTCAACTGGTGCTTTGCAGAATCCTGCCGCCTTGCAACCAAAACTCGATGAAACGGTGACGCTAAGAGATCTTTTTGGTGCGATTCTTCTTAATTCGGGCATAAATTTGAAGGACATTTTGGCTAGTGCTAATGCTGCCAATTCTGCCTCCAATGCAGGTGATACTCTTAATAATGGTAGTGGCAAGTCAAATAGCCTAAGTGATCAGCGCTTGTTATTGCAACAACTACaccatcaacaacagcaacaacaacatcccATAAGTGGTCAACACCAACAGTCACCTCCTTCAACATCAGCTCACTACTCACGCCGTTTGCCAAAGTCTGACACGCCTGAAACTACTTCATCATTGGACCTAAACGAAATTAGTGATGATCCTTCGGTGATCTTAAAAATTCCGTCCTACAAACCAGTAGCTGGATCTTCGACATCCGCCGCTGCTGCGCACTTAGGCCATGGGACAACATCAACTGCGGGGGCAATTTCACCATCGATGCATTGCAGTAACAACTCCAACTCAAATCGCAACGGTGATAGTCCGCACTCACAGCATTCGGCGCAGTCTCCGCGTATCGCCACTTCCATGTTAGCAGCTGCTGTAGCGGCAGCCAGTGGGAACAAAAACAGCACTGCACTGCACCATCAGAACAACAGCATCTCTGTTATCTCGCCACCGCTGGGAATGGGAACGGACTCACAGTCACCACCCTCTCTTTCACTACGAGAAGTGTTCGCCAACAGCATTCAGCGAACCATGAACGAACAGGCCAACAAAGATGCGCATGCGTCCATGCTGGGCCTAGGTGTTGACTCAGAGCGTAATTCCAGCGACTACAAAAAGCCCAGCATATCCGTTGTGAAAAACATCGGTGGCACTGATACGTCTCGTTTTGGTGAAGCGCCCAATCTGCTTACCGGCGTTGGTGGCGTTCACAATTCTCATCATCTCCACCATCACCCGCATTTGCAACATCCAGGGCACCATCACCATCATTCATCGCATCATCTGAGTCGTCAAGAAGCCGCCGCGCTAGCCGCTGGCAAGGGCACACGACCGAAACGCGGCAAGTACCGCAACTACGATCGCGATAGTCTCGTTGAAGCGGTCAAAGCTGTGCAACGTGGTGAAATGTCGGTGCATCGTGCGGGCAGTTACTATGGTGTACCGCATTCCACATTAGAGTACAAAGTCAAAGAACGCCATCTAATGCGGCCACGGAAACGTGAGCCGAAACCCCAACCACCCGATGGCAGTGGTACATCAACGTCTGCGTCGAAAACTAACTCAAACATTCCAGGTCTTGACCGAACCGCCGCAAATAATCTAGACAAACTGTCAAAGGCAAACCCAAGTGCGGGCGCTTCCAAAATTAGCGGAGCGCTCAAAAATAACGCCAATCCTGCAGCGTTTCCAAGCAACTCACCGAACGGCATGAAGCTCTCAATGTTTGATCAGAGCGTTACGGCGGCGCAACTGCAATATGCACCACATCTCTTTTGGCAACATTCCGCCTTCGGTCCACTGCAAATGGACTTTAATCGAGCGGCTGTAGCACAACAAAGCAGTGCCGGCGGTGTCAATGCAAGTGCCAATGTTGCATCGGCGAGTGCTGCCAGCTCGGCACTGCCCTACGTCAGTGCGGAAATACTTAAGTCACATATGCAACGCTACCAAGAGAAATCAATGCGAAGTACGCCTGGTGCGTCTGGTAGCTCAATTAAGCCCGGCAGACCCAGCCCTATTGCTAGTCCAATGTCCGGACAGAATCATCATGCGTTAAGCTATAAAAGTCCGCACGATTTAGCCGCAGAAAATGGTGGGGGCTTTCTCGAAGGCATCATACGTCAAAGGCTCGATCGCAAAAGTAACGATGCGGCGCCACCGCCCGTGAGTGATGCACTGCTGGGACAGTTGCTAACAAAAAAGACACCGCTACCATTCACTAATAACCGAGGCAGTACAGACTATATAACGACGCCTGGCAACTCGGCAGCAACATCGTCCGGTGTTTCGCAATTAAAGCGAACTGGTAGTCCATTACCAGCATATGGCAGCGTTGATATCAAACGGGAACGTGGCAGTCCAATGCATAGTGATATGGATGGTGATGGTGATGCATCCGTCAGTGAGACCGATGAACACAGCGaacacaataacaacaacaacaagacacTTATGAACAGTGACAAACTGGAAAGGAGAGGAGGAGGAGAACGCCACGCTTTGGAGCGAAGTCGCATGACTTCACGTGATTCTGATACAGACGGCGGTGGCAGCAGTAATGGTGGTAGCTTAAAAAGCGGCGGCATTAGCTTGACCAATGAGCAGCTTTCTAGTCAATACTACAATAACAATAGTAATGACATTAATGGCGGCGGCGGCGGCAGTGGCGGTCCTCTGACTCTGAAAGCTGAATTAAGTGGGGCAACAACGTCAATATTACAAGAGAAACTTGGACAGATAAAATCCGAACAAGAAAGTGAAGAGAATTTATAG
- Protein Sequence
- MGKSKTSRSTPVLPAVGRRTYTDDDLNSALQDIISGKLGTRKASVCYNIPRSTLRNKVYKLTTDAKRANATAPAELLQLQQALELEKDLSGDEGEGESNASTPQPAEAYDDLATATLRKLCENNTRSEDVGVGEHNATASPKIAASSLVSALSEQLKRKSSTPSSGGGAQPPQPTPSPQPQIPPILIDPNVFLQTLLLSTGALQNPAALQPKLDETVTLRDLFGAILLNSGINLKDILASANAANSASNAGDTLNNGSGKSNSLSDQRLLLQQLHHQQQQQQHPISGQHQQSPPSTSAHYSRRLPKSDTPETTSSLDLNEISDDPSVILKIPSYKPVAGSSTSAAAAHLGHGTTSTAGAISPSMHCSNNSNSNRNGDSPHSQHSAQSPRIATSMLAAAVAAASGNKNSTALHHQNNSISVISPPLGMGTDSQSPPSLSLREVFANSIQRTMNEQANKDAHASMLGLGVDSERNSSDYKKPSISVVKNIGGTDTSRFGEAPNLLTGVGGVHNSHHLHHHPHLQHPGHHHHHSSHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPPDGSGTSTSASKTNSNIPGLDRTAANNLDKLSKANPSAGASKISGALKNNANPAAFPSNSPNGMKLSMFDQSVTAAQLQYAPHLFWQHSAFGPLQMDFNRAAVAQQSSAGGVNASANVASASAASSALPYVSAEILKSHMQRYQEKSMRSTPGASGSSIKPGRPSPIASPMSGQNHHALSYKSPHDLAAENGGGFLEGIIRQRLDRKSNDAAPPPVSDALLGQLLTKKTPLPFTNNRGSTDYITTPGNSAATSSGVSQLKRTGSPLPAYGSVDIKRERGSPMHSDMDGDGDASVSETDEHSEHNNNNNKTLMNSDKLERRGGGERHALERSRMTSRDSDTDGGGSSNGGSLKSGGISLTNEQLSSQYYNNNSNDINGGGGGSGGPLTLKAELSGATTSILQEKLGQIKSEQESEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -