Cvir013177.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- pnr
- Assembly
- GCA_002245475.1
- Location
- NJDC01000024.1:121292-146186[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-18 3.2e-14 52.8 4.1 1 35 110 143 110 144 0.97 2 2 3.6e-18 1.4e-14 54.0 6.0 1 34 185 217 185 219 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGCAGCGGGGGAGCGAGCGGCGCGTACGGCGGCGGCGACTGCGCAGAGGGCTACGGACTCGGATACGTCGCAGGCAGCGGCCGTCTTCAGCAGTACGCTGCGCATTTCGCGCCTCATCAGACATGGCACCACCACCACGCGACGCACCACGACACATACGGCAGTGGTGGTGTCGGAGGAGTGAGCGGTGTAGGCTCCGTGGCCGGGGGACTGTACGGCCAGAACATGGTCATGGGATCGTGGTGCGCACCATACGACGCTCTACAACGGCCACCCGCTTATGATGGCGTCCTGGAGCCGTACGAGGAGGGGCGCGAGTGCGTCAACTGCGGCGCCAACAATACGCCGCTCTGGCGCCGCGACTCCACCGGCCACTACCTGTGCAACGCCTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGTGCCGACGCCGAGCTTCTCACCCGCTTCTATAAGGACGGCTCCGTGCAAAGATGGATGAGTGTCGAGGGCATGGCCAGGGGCATGAAAAAGTCGGCCGCTCGCCGCCACGGCCAGTGCTGCACCAACTGTGGGTCGCGCAACACGACGCTGTGGCGACGGAACAACGACGGCGAGCCCGTCTGCAACGCCTGCGGACTCTATTACAAGCTGCATGGCATCAACAGGCCTTTAGCAATGAGAAAGGATGGAATACAAACACGAAAGCGGAAGCCCAAAAAATCGGCGAATGGCGCAAAACCACCGCAAGACTCCGTTAAGAAGGACGATCAGAGTTCCCCTGGAGTTGACGAAAGCAAACCAAGTATAGCCGAAGTACCACTACCGCTACCTCTAACGTCGTCGATGGCGGGCCACAACACCAGCAAGCCGGTGCGCGAAACAATAAGCGGAGCGGGCACGCCAGCGGCGCACGCACACTCACACTCGCACGGACACGCGCACGCACACTCACACGCGCACGGACACGGGCAGGGCGCGCAGTACCCGCTGGGCCTGGCGGCGCCGGCTTTCCTCTCCAACCCGTCACTCTTCAACATCAAGAGCGAGCCCAGCGCGGCACCAGCCTATGAATCGTATTCCTCGCACTCCTCACACTCTTCCAACGGACCTTACCACTCGCAGCAACATTATTTACACGCATTGCAGtaTGGCCTAGGAAATAATGAAGAAGAAGAGGGCAGTGGTTTCCTACATCAGAGAAATGTAACAGCACACGCTAAACTAATGGCTTCAACGTAG
- Protein Sequence
- MFGGSGGASGAYGGGDCAEGYGLGYVAGSGRLQQYAAHFAPHQTWHHHHATHHDTYGSGGVGGVSGVGSVAGGLYGQNMVMGSWCAPYDALQRPPAYDGVLEPYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRADAELLTRFYKDGSVQRWMSVEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGAKPPQDSVKKDDQSSPGVDESKPSIAEVPLPLPLTSSMAGHNTSKPVRETISGAGTPAAHAHSHSHGHAHAHSHAHGHGQGAQYPLGLAAPAFLSNPSLFNIKSEPSAAPAYESYSSHSSHSSNGPYHSQQHYLHALQYGLGNNEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00822544;
- 90% Identity
- -
- 80% Identity
- -