Cvir014695.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- zfy1
- Assembly
- GCA_002245475.1
- Location
- NJDC01000027.1:21468-58369[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0025 0.23 12.6 3.4 1 23 205 228 205 228 0.96 2 9 2.2 1.9e+02 3.4 0.4 1 23 297 319 297 321 0.91 3 9 1.5e-05 0.0014 19.6 0.5 2 23 339 361 338 361 0.92 4 9 0.00043 0.038 15.1 0.7 1 23 367 389 367 389 0.97 5 9 0.0022 0.2 12.8 1.6 2 21 402 421 402 426 0.93 6 9 0.0017 0.15 13.2 2.0 1 23 434 457 434 457 0.94 7 9 3.5e-05 0.0031 18.5 2.1 1 23 462 485 462 485 0.98 8 9 2.1e-06 0.00018 22.3 0.7 3 23 494 514 493 514 0.98 9 9 2e-06 0.00018 22.4 2.9 1 23 520 543 520 543 0.96
Sequence Information
- Coding Sequence
- atgaatgttaAGGAAGAAGGAAATAGTTATTTACTATGTATGGCCTGTTTATGTGTGGGGAGAACCATCAAGACAATAACGGATGATAAACTTaggcaatattattttgatactcTAAGAGAAATTCcgCTGTGTGATATTCCACAAGTTGTTCCTAATGTTTGTTGGGAATGTGAGGCACTTTTGCGTAAAGTGCTAGCATTCAGGGAGCAGcaAACTAAAGCAAAAAGAAAAGCTGGATTGAGAAAAGAAATTGTCTCAATAATTCCGGAAATAGAGAAGTGTGAAGTGGATGAGCTAGATAGTGATGATAGCTACCAAGACGACGGTATCGATGGTATTGCCAGTGATAATTCTgaagaatttaatattatgaaaattgaaGTGGATGTTTCAGACACTAAGGACCAAGTGAAAAATGAAATCAAACAAGAACTCACAAGGatcacaaaagaaaaaagagtGAAACCAACCAAGAAGACTGATAAAAAGatgTTAAAAACATCGAAGAAACTCTACAAGCAGAAGATTCTAACCGTAGAACTATCGTATGAAGAAATGTTGTCTGAAAGGACCCAAATCGCTCAGAGCACTTCGTTTATTAGTGCTCAATACAAATGTGCCAGCTGTCTCCGTGTGTTTCGTAATCCTAAACATTTGAAGGACCACAACAAGTCTAAACATGCACCGCTATTTGAGGGAGGCAATTCAAGAAAAAAGGCGAGGCAAGCTCAGAGCGGGAGTGTTGCTGTTGTACCACGACTTGCCGGTTTACACCGCGCGTTGCGAAGACTGCTGTACAAGACCGTGGCTTCGAGAAAATTAACAACGCCCCCCCCTTATATTGTGAATACATTGAACGCCTCTCGTATCGGTGAATTGGGTGAATATATATGTCCTATTTGCTACGTCATCGAGTCTTCAATAAACACTTTTAAAGCGCACTATAAAAGACATACAAGAAGTTCCATAGACACGCACCGGTACCACAAGGACTCGCACAAGACGCGTGTTCCGTGCAAGGATTGCGACAAGACTTTCAGCCACCGAGCTGGACTGATGAACCACAGACTAGCAGTCCACGAATCTCAGAACCAGTTTCCTTGCACGGCGTGTGATAAGGTGTTTCGATGGAAAACCAGCCTCAACCGCCATCTTGAGAAACATCGGGGCAAGAACCCAGACACGGTGGTCGGTAAGGCGTACTGCTCAGATTGCGACATAGGCTTTTCGTCCGTCTGTTCTCTTCAGCGACATCTTCGTAACAGTCTTAAACATGTCACGCATGACCAACTCAAATTCATATGTGACCATTGTCAAAGTCGTTTCGCTGACAAAACCAAATTACGGAACCACATCGAGGAGAAACATTTACACAGGACTTACCAGTGTCATATATGTCATaaaCCTTCAAAGAATCGTGTGGGCTTGGAACAGCATATACGTAACGTGCACAAGGGACGACCGAATAACAAAATTTGTCATCTCTGCGGCAAGGGGTTCCCGACGAAGGTCCAGCTGGAGTCCCACATCAGGTCGCACACGGGCGAGAGGCCCTTCATCTGCGAGTACTGCCCCACCACATTCTCCCAGCAGTCCAACTTGTACAAGCACCACAGGCAGgtacatatgaatataaaatcGAAGAAATACGCAATGTGCAAGAAGAGGAAAGTCGAAGGAAATCAAACCGGCGAGCCCACGACTGTCGAACACGGGTTCACGTCGATAACACCAGCAATAAAACCGCTCGTAAAATTGTTTCTTGCAACAATGAAATTGTGTATACTATGGATCTCCTTGGCGTTATTGGttTCAGCCTCCAAACCAACAGATCCAAGAAGCGTAAATTTAGCTATAGAAGCGTCAGTTTTACTTAAACCCGAAGACgttaagaaaaatacttatttgtttcaaaaaattcGTAGATTTATACATCAATTCAGCAAAACATTTGAAGCAGATAAACTAAACTATCGAAGAAACATTCAAGATGGACTTTTAAAGAGATTTATCGTCAAATTAAGTGAAATCATATTGAAATACGACGAAAAACATGCAAATGATTTCAAAAACGGAATCGCAACTTATGCCGACATATTTCTTAGAGGTAATCAGGaatttagtcaatttttatacaatagacTGTCGCCCTTAAAAGATTTAGAGTTACATGATTTTAAGAACAGagtagaatatattataaaaaataaggatgAGATGGCCAATGCGTTATTTGATATTTGTGATAGAGCGTACATAGAAAACGAAGACGATGGTACAATCTTAgagcatattttaaaaagatttgaagaaTATCCAAAGAAACGCGGAAATATTGTTGCTATCATTTATGATgctctaaaatttattttcaataaatacgaTAAGTTGAACATGTCAgagaaaactatttttaatacagaaaTTAGGAAACTAAACAATGGTGATATGTCGGGAATATTTAAAGATGCAAGTATAACTAATGATTTAGTTTTTGACCATGATATAATAATCAATGTTGGAGGCAACAACGATGATAAAAGACAGGGAGAATCAAGAAATGCTACAAATACCGAGTTGGTACCGACCCAACATAACTATATGCACTATTattaa
- Protein Sequence
- MNVKEEGNSYLLCMACLCVGRTIKTITDDKLRQYYFDTLREIPLCDIPQVVPNVCWECEALLRKVLAFREQQTKAKRKAGLRKEIVSIIPEIEKCEVDELDSDDSYQDDGIDGIASDNSEEFNIMKIEVDVSDTKDQVKNEIKQELTRITKEKRVKPTKKTDKKMLKTSKKLYKQKILTVELSYEEMLSERTQIAQSTSFISAQYKCASCLRVFRNPKHLKDHNKSKHAPLFEGGNSRKKARQAQSGSVAVVPRLAGLHRALRRLLYKTVASRKLTTPPPYIVNTLNASRIGELGEYICPICYVIESSINTFKAHYKRHTRSSIDTHRYHKDSHKTRVPCKDCDKTFSHRAGLMNHRLAVHESQNQFPCTACDKVFRWKTSLNRHLEKHRGKNPDTVVGKAYCSDCDIGFSSVCSLQRHLRNSLKHVTHDQLKFICDHCQSRFADKTKLRNHIEEKHLHRTYQCHICHKPSKNRVGLEQHIRNVHKGRPNNKICHLCGKGFPTKVQLESHIRSHTGERPFICEYCPTTFSQQSNLYKHHRQVHMNIKSKKYAMCKKRKVEGNQTGEPTTVEHGFTSITPAIKPLVKLFLATMKLCILWISLALLVSASKPTDPRSVNLAIEASVLLKPEDVKKNTYLFQKIRRFIHQFSKTFEADKLNYRRNIQDGLLKRFIVKLSEIILKYDEKHANDFKNGIATYADIFLRGNQEFSQFLYNRLSPLKDLELHDFKNRVEYIIKNKDEMANALFDICDRAYIENEDDGTILEHILKRFEEYPKKRGNIVAIIYDALKFIFNKYDKLNMSEKTIFNTEIRKLNNGDMSGIFKDASITNDLVFDHDIIINVGGNNDDKRQGESRNATNTELVPTQHNYMHYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -