Cvir027174.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- ZNF131
- Assembly
- GCA_002245475.1
- Location
- NJDC01000432.1:3777-9065[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3.1e-05 0.0028 18.6 0.3 2 21 119 138 118 139 0.95 2 19 0.17 15 6.9 4.4 2 23 144 165 144 165 0.96 3 19 0.038 3.4 8.9 2.2 1 23 170 193 170 193 0.93 4 19 0.0072 0.64 11.2 3.1 2 23 199 220 198 220 0.93 5 19 3.3 3e+02 2.8 3.7 1 20 223 242 223 244 0.91 6 19 0.001 0.09 13.9 3.5 1 23 256 279 256 279 0.92 7 19 0.048 4.3 8.6 3.1 1 23 285 307 285 307 0.96 8 19 2 1.8e+02 3.5 1.3 5 23 316 334 313 334 0.95 9 19 0.02 1.8 9.8 0.6 1 23 340 363 340 363 0.96 10 19 0.0013 0.12 13.5 2.8 1 21 369 389 369 390 0.94 11 19 0.00048 0.042 14.9 2.6 2 21 498 517 497 518 0.93 12 19 0.0094 0.84 10.8 1.4 2 23 552 574 551 574 0.96 13 19 0.00014 0.013 16.5 0.9 2 23 580 601 579 601 0.96 14 19 4.2 3.8e+02 2.5 4.9 2 21 605 624 605 625 0.92 15 19 9.8e-05 0.0088 17.1 0.7 1 23 651 674 651 674 0.94 16 19 0.00027 0.024 15.7 0.5 1 23 680 702 680 702 0.95 17 19 0.061 5.4 8.3 0.1 1 23 708 730 708 730 0.97 18 19 0.0023 0.21 12.8 0.6 1 23 736 759 736 759 0.94 19 19 4.2e-06 0.00038 21.4 1.1 2 23 766 788 765 788 0.96
Sequence Information
- Coding Sequence
- ATGCTCTTCTGTGACGATTTCTACCGATCTACTACTATCGCAATGCTTAGAACGGTGGAGGAAAGCGGAGAGCTCCCACCTGGTACGTGCGCGTCATGCTCTAGCAATGCGCTCCTGGCCTGGCAGTTCCAACGCCTCTGTACTGAATCAGAATTGCATTGGTCAAAAGCTGCCTCAATCATACCTCCATTGATGTACACAGGAAAAGACAAAACTCTTTACGTATTTTACAATGATGGGCACGTTTCTAAAGAACAATTCGTAGTCAACAATGTGGCTAAAGCTGTGGAAAGACTAAATTTATCGAAAGGAATACGAAagcgaaaaaagaaatatagaatTAATTCTAGGTTAAAGTGCAAAGATTGTGGAAAAGATTTCAACTctgcacaaaaattaaatgatcaCATTAGAAACACAATGAGACGTGTTtgcaataaatgtttaaaaactgtcCATAAATCAAAGCTATCGCGACATTTGAAGAAATACCATGGAATAAAAGTTCATTCGTGTAATGTCTGTTATGAAATTTTCAACCATAATTCAGAAGTTGCAAACCACAAACTCTTATACCATGGTAATAAAAGCTGTCAGTGCACAATTTGTGAATGTGGTTTCAAAAACGAAAGATCTTTAAGGGCTCATGTATACGCACATACTTTATTCAACTGTCCGTCTTGTAATTCAAGCTTTGATAATCGTCAATGCTATAAATATCACAGCAGTACATGCACTGGAACCAAGAATCCAACACAAGATTCATTTGAGTGTCACGATTGTGGACAAAAGTATGACAAGAAACCGTCTTTAAAAACTCATATAGTTCATAAACATTTGCACGTTTTGCCCTATGCTTGTTCATTCTGTGGCAAACGTACCTCGACTCGCGCTCATCATACTGCCCATGAGAATATACACAGAGAACAACGGTTCCATCAGTGCTATTGTGGGGTGAAATTGAGAAGTGCGCTCGGATTCAAGTTGCACCAAAGAATACATTCAGGGGAAAAGCCGTACGAATGTTCTGAATGTGGAGAAAGATTCCTCTCTGCCTCAAGAAGATTGGATCATATGAAACGACGTCATAATAGTAATATTCTCCATGCTTGCAAGAAATGTGGATCTAAATTTATAAGGCCCTTTGAATTGAGAAAACATTACCGGCATTTTGAAGACGAAGAATTTTGTCCCCGAGGAGTATGCGCTGAGTGTACTTCCTTCGCAACATCTGCTTACGAATTCAGAATGATggcaagaaaatccttgacataTTGGAACAATTGTCTGTACTTCCTTAACACTTTCCCAAGCTTAAACACGAACCAGAAATCAATGTACGGTATTGTGAAAAACGATCTAACCATCCAAACTGTGAACCAGTTTGATGGAAATGCTTCAGATCTTATAGATATTCTCATGAACAGAACGACGAGAAAAAAGCCGGTTGGCACAAGAAAACCCCGTCATCCAAGATCTGGACCTTCCTGCACTTGCATGGATTGCGGCAAACAATTTACCAGTCCACATTTTCTCAATTTACACTTACGAAATGGTGGACAACGAGAAGCATGTTGGACTTGTGGAGCTATGGTACTTCGTGGTCGAGATATGAAGGAACACTTGGCTAAAGTCCATAAAGTTTATATGGTTGTATGCCCAGACTGTCCTACATTATGTCAAAATGATTCAGAGCTTAAAAAACATAGAAAGAAAAGCCATACCCACGGTGTTAGTACTTGCACAGACTGTGGGAGAACATTTCAAAGATCAGCCTCATTTGAACTACATTCTCAAATGCATATGGTCAGAACATGCAGATCTTGTGGGTCCCAATTTACAAATCGTGGTTGCTATAGGCATCATCGGTCAAAATGTGAACCTGAAGCTAAACCTGATTTGAAAACAGTTCCACGAAATCGAAGATCGAACATTCGAGATCCTGCGACGTTTATTTGTGATTACTGTAATAAAGTTTATCACTCACGACCTCAATTAAAGAATCATATTATATGGATACATATGGATGTTAGGCCCCATCAGTGTCAATGGTGCGGCAAAAGGTTTTATACCCCAGCGCGATTAGCAGAGCACACAGTAGTTCATACGAGGGTTAGGAATTTTGAATGTGACATTTGCGGTGCTAAATTAGTGTCCAAAATGGCTGCTGTGTACCATAGACGAAGGCACACAGGCGAAAGGCCCTATGAGTGCGAGGACTGTGGAGAAAAGTTTATTTCTTCGTCTCGTCGATCGGAACATGCAAAACGGAGGCATAACAAAGGAGTTAGGTTACAGTGTAAGGAATGTCCAGCTACTTTTGTAAGGAATCATGAGTTGAGGAAGCATATAAATAAAGCGCATTGCCGCATTGTTGGTTTAGTGGCACCGATGTCGGTTGAcgcataa
- Protein Sequence
- MLFCDDFYRSTTIAMLRTVEESGELPPGTCASCSSNALLAWQFQRLCTESELHWSKAASIIPPLMYTGKDKTLYVFYNDGHVSKEQFVVNNVAKAVERLNLSKGIRKRKKKYRINSRLKCKDCGKDFNSAQKLNDHIRNTMRRVCNKCLKTVHKSKLSRHLKKYHGIKVHSCNVCYEIFNHNSEVANHKLLYHGNKSCQCTICECGFKNERSLRAHVYAHTLFNCPSCNSSFDNRQCYKYHSSTCTGTKNPTQDSFECHDCGQKYDKKPSLKTHIVHKHLHVLPYACSFCGKRTSTRAHHTAHENIHREQRFHQCYCGVKLRSALGFKLHQRIHSGEKPYECSECGERFLSASRRLDHMKRRHNSNILHACKKCGSKFIRPFELRKHYRHFEDEEFCPRGVCAECTSFATSAYEFRMMARKSLTYWNNCLYFLNTFPSLNTNQKSMYGIVKNDLTIQTVNQFDGNASDLIDILMNRTTRKKPVGTRKPRHPRSGPSCTCMDCGKQFTSPHFLNLHLRNGGQREACWTCGAMVLRGRDMKEHLAKVHKVYMVVCPDCPTLCQNDSELKKHRKKSHTHGVSTCTDCGRTFQRSASFELHSQMHMVRTCRSCGSQFTNRGCYRHHRSKCEPEAKPDLKTVPRNRRSNIRDPATFICDYCNKVYHSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECEDCGEKFISSSRRSEHAKRRHNKGVRLQCKECPATFVRNHELRKHINKAHCRIVGLVAPMSVDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -