Cvir001875.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_002245475.1
- Location
- NJDC01001863.1:149365-151488[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.22 6.3e+03 -2.5 3.9 78 103 41 66 3 96 0.51 2 4 0.42 1.2e+04 -3.4 1.7 66 97 149 180 127 190 0.43 3 4 2.3e-101 6.4e-97 324.3 7.3 2 218 194 402 193 402 0.94 4 4 0.053 1.5e+03 -0.5 1.0 40 112 579 652 568 657 0.73
Sequence Information
- Coding Sequence
- ATGGAAAATAAACCGGAAAAAGACGACcaacaaaatacaaatgttacatCGGAAATTATGAACTCAAGAGAAGAGTGTTGTGTATCTGAtgtaaaaaacagtaaaaatgaCATTGATGGCAACTGTGAGGAAGAAAGCGTCACCAATGAACAAAGTAATAATTCTCAGTTTTATGAGAAAAGTGATAGTAAAATAGACTATGCTGTAAAATTAGATGATAGTGATACCCTTAGTGATATTGAAGATATCAAAACAGATACAGCGTCAGCTGATAGTGAAGATTCGGCTCTTGGGAGCTTACCGTCGGATATAACTTCAAATGATAGAGAAGATGATGGGCCAGATAGATCAGACGGCAGTGATTCGGGCATAGGTTCGGAAACTACAGAAGACATAAAATTAccaaattatgataaaacaatGTCTAATGACGATTTTCAAAACAACGCAGAAGCACAATCCGATGAACATATCgggaaagaaatagaaaataaacaagTATCTGAAAATGAACCTCGACGAAGTAGTCTTAAAAGGAAATGTGACGAAGAAAATGATGTTGAACCTAGGACCAAGAGAAAAAAGTCGaacatacaatttaataatgttactgTGTATTATTTTCCGAGAGCTCAAGGTTTTACCTGCGTGCCATCACAAGGGGGCTCTACATTAGGCATGGAGTGGGAACATACTCATTCACAAAAGTTCACTTTGGCAGAGCACGCTATGGAGCAGCGTAGATTGCATAGACAAATATTGCAACAATTAAAAAGTGAACGTCATTCAGAGCAAGGCCTGCCTTTATCTTCAAGTGAAGATAGTGACACTGAAGAGGAAACTAGTGATATTTCAGAGTCTGAGTTAGACTTGGACAGTTACTACTTTCTTCAACCAGTGCCAACAAGACAGCGAAGAGCTCTACTCCGTGCTGCTGGAGTCAGAAAAATTGAAGGTTATGAAAAAGATGAGTGTAGAGACATTAGAACTTCGCGTGAATTTTGTGGTTGTGCATGTAAAGGAACGTGTAACCCAATTAGTTGTTCATGTAGTATAGCAGGCATCAAATGCCAAGTTGATAGGTTAAATTTTCCCTGTGGTTGTACGAGAGATGGCTGCAGTAATACTACAGGCCGGATCGAGTTCAACCCCATTAGAGTAAGGACCCATTTCATTAACACGCTTATGAGAATAGGattagaaaagaaaaatgaGGAAAACCAAGAAGCTGCTAAACGACAGTGGGCTGAAACACTCAATTCAAATACTGCTATGGCATGCATGCCTAGTACAAACTTATGTTATGAAACGGAACGCTGCAGTAGTACTTCTGGACATACAATACAACCATGTGTCAGTAACACTGAAACCTTAAGTAATCATTGTAATCTAAATAACCCATCTACGAGCAATATTCAAGGTGAATCCTTATATTATCCAAATGACTCAACCAACCTTAGAAATATAAAGACTCAGAATATAATTAACTTTGAAGATAAATCAAAACATCGAACACATGATTCCTATACTTCAAACATTTTACAAGGTAAAGGTCCACCATATCCATCTAATACAATGGAATTTAACGCCATGCCCAATAATTTGCAAAGGTACCCGTGTGATCTCAATTATATGTATGATCAGCATTCAGATAGTCATCAATACAAAGGTTTGCAAAGCTATTCAGCCTCCAGTTTTGAAGAATTTGCACACAATTCACAAATGACGATGTTTAATCACTATGGCCATATGTATCTCCCAGAATACGTTCATAAGCAGAGCACGAACATGACAGAGCACAACCTCCAATACCATATGCCACAAAACCATTACGAGATTTACAAGAATACGTCAGAATGTGTAAATGTAGATAATAAATCTGACGCACGCTATACTAATTTATTGCCatatcaacaaaataaattacaaagtgTAGAAAATGATGAGAATTGGTTTAGTCATAATACGCTGTTAAATTTAGATAATTCTGACCAAATAACGCCAGTTGCTCCTAGTATACAGAGTGAGCCGGTCCAGTCACAACCTGAAGCCACTGTAAGTGATACAACGGAAAACTTAGGcgaacttattaaaaaaacgatagTAGAGTCTGTTACTGTGTAG
- Protein Sequence
- MENKPEKDDQQNTNVTSEIMNSREECCVSDVKNSKNDIDGNCEEESVTNEQSNNSQFYEKSDSKIDYAVKLDDSDTLSDIEDIKTDTASADSEDSALGSLPSDITSNDREDDGPDRSDGSDSGIGSETTEDIKLPNYDKTMSNDDFQNNAEAQSDEHIGKEIENKQVSENEPRRSSLKRKCDEENDVEPRTKRKKSNIQFNNVTVYYFPRAQGFTCVPSQGGSTLGMEWEHTHSQKFTLAEHAMEQRRLHRQILQQLKSERHSEQGLPLSSSEDSDTEEETSDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGTCNPISCSCSIAGIKCQVDRLNFPCGCTRDGCSNTTGRIEFNPIRVRTHFINTLMRIGLEKKNEENQEAAKRQWAETLNSNTAMACMPSTNLCYETERCSSTSGHTIQPCVSNTETLSNHCNLNNPSTSNIQGESLYYPNDSTNLRNIKTQNIINFEDKSKHRTHDSYTSNILQGKGPPYPSNTMEFNAMPNNLQRYPCDLNYMYDQHSDSHQYKGLQSYSASSFEEFAHNSQMTMFNHYGHMYLPEYVHKQSTNMTEHNLQYHMPQNHYEIYKNTSECVNVDNKSDARYTNLLPYQQNKLQSVENDENWFSHNTLLNLDNSDQITPVAPSIQSEPVQSQPEATVSDTTENLGELIKKTIVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00255917;
- 90% Identity
- iTF_00255917;
- 80% Identity
- -