Cvir024864.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- rcor2
- Assembly
- GCA_002245475.1
- Location
- NJDC01015265.1:4703-21033[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-09 1.6e-06 28.8 0.0 3 46 133 176 131 176 0.97 2 2 2.3e-11 3.3e-08 34.1 0.0 3 46 397 440 395 440 0.96
Sequence Information
- Coding Sequence
- atggTTCTGGCTGAAAGAAGTAGTGATGTTCGGAACGGAAAGCGTTCGAGGGGACCAAGCCCGAATGGTCATGGAAGCCCCGACTCCAGCTCTGAAGACGAAAATGCAGTAGTGCCATTTGCAGCTGAGAAGATAAGAGTGGGTCGAGATTACCAAGCGATATGCCCTGAGTTAGAGCCAGTTGAACAACGACGCCCAGACCAAATATCAGACAGAGCCTTATTGGTTTGGTCACCTACATTAGACATTACAGATAAAAAGTtgGATGAATACATAACAACGGCGAAAGAAAAATATGGTTATAATGGTGAACAGGCTCTTGGAATGCTGTTCTGGCATAAGCACGATTTGAGCAGAGCCTCAATGGATCTGGCTAACTTTACACCTTTCCCTGATGAATGGACAGTAGAAGATAAAGTATTATTTGAACAGGCTTTTCAGTTTCATGGAAAAAGCTTTCATAGAATTCGCCAAATGCTTCCAGATAAATCGATAGCATCATtagtcaaatattattattcatgGAAAAAGACAAGATCTCGGACATCTTTGATGGATGTGGTGAGTGAAGGACGTAATCCAACCAGTTCAGGAACAGGCAAGCGTGAATCTGGTGGAGCTGGTTCTGAGCCGACAGGCTCCGACAAAGATTCAGATAATGATGAGAAGAAGTGGACTTTGCATCGAGGTATTGTCCGTGGCAGCAAGTCTGTGCCGGCCGGCGGGCCCTCCCTGCGCGCCGGCCAGCAAGGCGAGGACGAGGGAGGCGGCGAGGGCGCGGGAAAGTGGTGCTCCGTCTGCGGAATTCTGTGCTCGCAGACCACGCAACACAACTCACAGAAACTGTGCCAGGCATGCCTCGTGCACGCCAGACGTACGGGTGGCGCGCGGCCGCTGTGCGGGCCGGCGGGGAGGCGAGCGCGCTTCAAGCACCGTCTGCCGCGCGGCATTTACATCAACCATGATGACCTCGTCGCCATGGCAACGGGCCCCCAACCCGGTGACGCCGCACAACCCGGCAGGGTTAATCAGGGCGACGCTATGCTCAAGGCCATGGATCGAGAGATTATCTCGTTCAAGCGACAAGTACAACAAAATAAGCAACAATTAAGTGCAATGAAGAGGAAAGTTGGAGATACAGGTGTGGAAGAATTACGGCCCGGGGAGCCACCAGCTAAGGTTAACTCACGGTGGACAAATGATGAACTACTTATGGCAGTTACTGCTGTTAGGAAATATGGGAAAGATTTCCAGGCAATTGCAGAAACGCTGGGAACAAAAACTGAAGCGCACATTCGTACTTTTTTCGTATCTTACCGGCGTAGATATAATTTGGACGCAGTCTTGAGGGAACATGAAGCGGATCGAGGGAATTCCAACCACATTCAATCaggtgcAACAAGTACAGAGTCCGGTGATAATGATGTGGATAACAGCACTAACAATGGTACGGGCTCTcctcaaacaaatacaaaagagGAAAAACCCGAGGTGGACAGCGAGGGCGTGGCGCTGGGCGCGTCGGCGGAGCAGGGCGGCCCGCCCACCGCGCCGCACAAGCACAAGCCAGCCAAGTGA
- Protein Sequence
- MVLAERSSDVRNGKRSRGPSPNGHGSPDSSSEDENAVVPFAAEKIRVGRDYQAICPELEPVEQRRPDQISDRALLVWSPTLDITDKKLDEYITTAKEKYGYNGEQALGMLFWHKHDLSRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDVVSEGRNPTSSGTGKRESGGAGSEPTGSDKDSDNDEKKWTLHRGIVRGSKSVPAGGPSLRAGQQGEDEGGGEGAGKWCSVCGILCSQTTQHNSQKLCQACLVHARRTGGARPLCGPAGRRARFKHRLPRGIYINHDDLVAMATGPQPGDAAQPGRVNQGDAMLKAMDREIISFKRQVQQNKQQLSAMKRKVGDTGVEELRPGEPPAKVNSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKTEAHIRTFFVSYRRRYNLDAVLREHEADRGNSNHIQSGATSTESGDNDVDNSTNNGTGSPQTNTKEEKPEVDSEGVALGASAEQGGPPTAPHKHKPAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00356149;
- 90% Identity
- iTF_00144525;
- 80% Identity
- -