Cvir010778.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- CDC5L
- Assembly
- GCA_002245475.1
- Location
- NJDC01001008.1:145375-153759[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-17 3.2e-14 53.4 1.8 2 46 9 54 8 54 0.97 2 3 2.5e-12 3.7e-09 37.2 0.1 1 45 60 103 60 104 0.93 3 3 9.8 1.4e+04 -3.1 0.0 23 30 466 473 461 476 0.64
Sequence Information
- Coding Sequence
- ATGCCGCGAATAATGATAAAGGGTGGTGTTTGGCGGAACACGGagGATGAGATCCTCAAAGCAGCGGTAATGAAATATGGGAAAAATCAATGGTCTCGTATAGCTTCATTGCTACATCGCAAATCTGCAAAACAATGCAAGGCTCGTTGGTACGAATGGTTAGATCCGAGTATTAAAAAGACAGAATGGTCTCGAGAGGAAGACGAGAAACTTTTGCATTTGGCAAAGCTCATGCCCACCCAATGGAGGACTATAGCACCAATAATAGGGCGCACTGCAGCCCAGTGCTTGGAAAGATACGAATATTTGCTAGATCAAGctcaaaaaaaagaagaaggggAAGACCTGGGAGATGATCCTCGTAAATTAAAACCAGGAGAAATTGATCCAAATCCTGAAACAAAACCAGCTCGACCAGACCCTAAAGATATGGATGAAGATGAACTGGAAATGCTTTCGGAAGCTCGTGCACGTTTAGCTAATACTCAAGGCAAAAAAGCGAAGAGGAAGGCTcgtgaaaaacaattggaagAGGCACGCAGACTTGCTGCACTGCAAAAGAGAAGGGAACTGAGTGCTGCTGGCATTGCAGTCCCAATCAGacgtAAGAAGAAGCGTGGCGTTGATTACAATTCAGAAATACCATTTGAGAAAAAGCCAGCTGCTGGTTTCTATGATACTTCTACTGAGGTTGTAGATCCGATGGCGCCAGACTTTTCCCGACTGCGCCAACAGCATCTTGATGGCGAGCTACATTCTGAAAAAGAAGAGAGAGACCGTCGTAAGGATAAACAAAAACTGAAACAACGGAAAGAAAATGATGTACCACAAGCTATGTTACAAGGCGATCAACCGGCGCGTAAACGCAGTAAACTTGTGCTGCCAGAACCGCAAGTTTCGGATCAGGAGCTGCAGGCGGTGGTGAAGCTGGGCCGGTCGTCGGAGGCGGCGCGGGAGAGCGCGGGGGCGGAGGCGGGCGCGGGGGCGGCCACGGACGCCCTGCTGGCGCACTACGCGCTGCAGCCCGCCGCGCCCACCGCGCTGCGGACGCCGCAGGCAAGGGACCGAGTGCTGATGGAGGCCCAGAACGTGATGGCGCTGACGCACGTGGACACTCCGCTGAAGGGTGGGCTGAACACGCCGCTGCTGGAGTCGGACTTCTCCGGCGCGCTGCCGCAGCCCGCCGCCACGCCCACGCCCAACACCGTGCTCGCCACGCCCTTCAGGTACACTACTCTGCCACCCTCTACTACTGCTACTGGCTACTTTCACTTTCTTACCACCGCCGTGTCTCTTCCCGACGTTACGACGTCGATGCTTGTCATTGTGTTCTTAGCTGGAGGCTCATCTAATTTGCAATTCTCTATTACATTGGGTTTATATGACCTGTATCAATggcaaaaaattattaaattggtgCGGCGAAATTTGCAATGGACCTTGATTCCGCACCCAACCTttagttttacttatttataa
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDLGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPIRRKKKRGVDYNSEIPFEKKPAAGFYDTSTEVVDPMAPDFSRLRQQHLDGELHSEKEERDRRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVSDQELQAVVKLGRSSEAARESAGAEAGAGAATDALLAHYALQPAAPTALRTPQARDRVLMEAQNVMALTHVDTPLKGGLNTPLLESDFSGALPQPAATPTPNTVLATPFRYTTLPPSTTATGYFHFLTTAVSLPDVTTSMLVIVFLAGGSSNLQFSITLGLYDLYQWQKIIKLVRRNLQWTLIPHPTFSFTYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338704;
- 90% Identity
- -
- 80% Identity
- -