Cvir005600.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- kn
- Assembly
- GCA_002245475.1
- Location
- NJDC01058352.1:19297-46051[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-42 1.4e-38 133.2 0.0 11 116 171 266 162 266 0.92
Sequence Information
- Coding Sequence
- ATGGAAGGTGTGATAAGTGGCGCCACCTGTGCCAGTGTCGTCGTCCCGCTCGTGAGACGAGGGCGTGTCCCAGGGGCACCTCCCACAGTCCGCGGGGACGGGGGCACCGCAATGCTGAAGCACTCGGCGtttttGCAATCTTCGTTATTTTCCGCGGGTGTTCGTGCGCTTTCGGGCGCGTGTTTCGGGCGTCCGGTGGTGATTCGCGATTCGGTCGGACGAGTTAAACGCGGCGGCGGGCGGGTATACGAGCTCGCCGTGGCCGCCGCTGGAACTAGACCCCGTGGGATGGGGCCGGAAACTCTATCCGTCCGGCGCGCCGAGATCATcagTTTCCGGATCgagtgtgtttgtgtgaaacGAAGTTTGAATGAGGAGAAAGCCAGGTTGATCTGTAAAAATCATGACACTTGCTGCTCTACTCTGTTCAAGGGTCTTGGAGGTCTGATGTTCGGTCTGCACCACCAAGAAGCAGCCGGAGTACATGCTCAGCCAAGAGGCCCAGTCACATCACTCAAAGAGGAACCACTGACTCGTGCATGGATGACTCCAACTTCATTAGTTGACAATACCaatagCGTGGGTGTAGGGCGAGCACATTTTGAGAAGCAGCCGCCCAGTAATCTACGCAAGAGCAATTTTTTCCACTTCGTCGTAGCTTTGTATGATAGAGCGGGCCAACCTGTAGAAATTGAGAGGACAGCCTTTATTGGATTTATTGAAAAGGACCAAgaaGCCGAAggacaaaaaacaaacaatggaATTCAGTACAGACTTCAATTATTATATGCTAATGGttag
- Protein Sequence
- MEGVISGATCASVVVPLVRRGRVPGAPPTVRGDGGTAMLKHSAFLQSSLFSAGVRALSGACFGRPVVIRDSVGRVKRGGGRVYELAVAAAGTRPRGMGPETLSVRRAEIISFRIECVCVKRSLNEEKARLICKNHDTCCSTLFKGLGGLMFGLHHQEAAGVHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -