Cvir027461.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- kn
- Assembly
- GCA_002245475.1
- Location
- NJDC01002693.1:440404-452878[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-108 2e-104 350.7 0.0 229 387 1 177 1 181 0.99 2 2 4e-06 0.056 12.4 4.6 421 499 187 272 178 339 0.63
Sequence Information
- Coding Sequence
- ATGTTCGTCCACAACAACAGCAAGCACGGCAGAAGAGCGAAGAGGCTAGATCCAACAGAAGGTATTGACGCAGCGCCTGAACCTACTTCGGGCCTCTATCCGCCGTTGCCAGTGGCAACGCCATGCATCAAGGCAATATCTCCAAGCGAAGGTTGGACGTCAGGGGGTTCCACCGTTATTATAGTGGGGGACAACTTCTTCGACGGCCTACAAGTTGTTTTCGGAACTATGTTAGTTTGGAGTGAGTTAATAACGTCGCATGCAATAAGAGTCCAGACTCCACCTCGTCATATACCAGGAGTGGTGGAAGTAACGTTATCCTACAAAAGTAAAcagttctgcaaaggagcaccgGGGagatttgtttatgtttCAGCTCTCAACGAGCCGACGATAGATTACGGCTTCCAGCGGCTCCAGAAACTAATACCGAGGCATCCCGGCGATCCAGAGAAACTGCCTAAGGAGATCATCCTCAAGCGGGCAGCAGATCTGGCGGAGGCCCTGTACTCGATGCCGCGCAACAACCAGCTGGGGCTAGGTGGACCCCGGTCGCCACCTTCCACCATGCCTTTCAACTCCTACTCCACACAGCTAGCCGTCTCCGTACAAGATGCGCCTGCGTCGCAGTGGACGGAAGAAGAGTACGCGCGTAGTGGCGTCGGCGGTGGCGGCGGCTCTGTCTCCCCGCGGTACTGCTCTGCTGCCTCTACCCCGCACGCCGCCTACCCCGCGCAGCATTACCCCGCTCCACCTAGCTCGCTATTCAATACCTCTTCACTGTCGCTCGGACCATATCATCCAGCCAACATGAATCAAGTCAGTGACCACCAATATTTGTATAACGAGAGAGATAGCGGACATTACACTGAAAGAAACGGCAACTGTAAGAGCGCGTGCCCGGCAACTCATTCCAAATGCAACGGCGATATGAAAGGGGAAAAAGAGGGCAAACCGAGAAGCGCATTTGCCGTTGTAAGACAGAGTCCACCGCGGATAGCCAATTATCAACATCAAAGTTGGCAGCATCTCGCCGTTCagtgttag
- Protein Sequence
- MFVHNNSKHGRRAKRLDPTEGIDAAPEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPSTMPFNSYSTQLAVSVQDAPASQWTEEEYARSGVGGGGGSVSPRYCSAASTPHAAYPAQHYPAPPSSLFNTSSLSLGPYHPANMNQVSDHQYLYNERDSGHYTERNGNCKSACPATHSKCNGDMKGEKEGKPRSAFAVVRQSPPRIANYQHQSWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00255602;
- 80% Identity
- -