Cvir004614.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- -
- Assembly
- GCA_002245475.1
- Location
- NJDC01001269.1:246494-248719[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.028 96 4.1 0.0 50 86 104 139 57 140 0.78 2 4 0.0013 4.4 8.4 0.2 50 85 198 232 177 234 0.80 3 4 0.0074 26 5.9 0.0 49 83 288 321 271 322 0.81 4 4 0.0049 17 6.5 0.0 49 84 388 422 367 425 0.86
Sequence Information
- Coding Sequence
- atggAGGTTAACAATCCTCAAAATCATAGCTACTGGTTCGTCGTCAGGGAGAACCAgagtaatgttatatttagtaGCAATAACTTCACTGTTCAGAACCCgcaaaGACAAGAACCCCGGTATGGTACTGATACTTCCGAAAATCATCAATATGTTCAGGATGTAGATGGCTCCGCTGTTGTCCAAGATCTTGCAAAAATCTACGATAATGAAAGTAATAATCCACCTCGTCGAAATGATGCTTCatgggatgttaataaaattaaactactaCTGACTCTTTGTTTGGACACTAGATTCAAATCTGACTCAAATGAGATGATGTGGAATGAGATATCTCTTCTTATTGGTACCACCCCAGATGAGTGTGACAAGAAATATCGGAGCCTACGTAGAATTTATATaagacttttaaaaaacaaacgattgggtaaaaaaataaaatggatgtTCTTTAATATGTGTGAGGATGTTTTTAAAGACTGCAAAACATTGTCCTCAGCCACATTAGACCCCTGGGAAGATGCCAAAGTTAGAAAATTGCTTGGATTGTATATTGAAAATCTAAACAAATTCCAAAGTTCAGACTGTCGTCAAAAAGATATTTGGAAGGAGATTGCGTCACAGTTAAACACAACAGATTATAATTGTTATCACAAATTCAAAAATCTAAAGAGAACCTACTTTAATTGGTTAGATAAAAGTGGCGAATCTGGTAAAGTTGTTAAATGGCCATATCATCATTATTTTGAaagaatattttacaattacaaacCTAACATAGGACCttgggataaaaataaaatcaaattgctAATTAATGCATATGCTGAAATAGCTGGGAGATTTAAAGATCCtaagtttcaaaaaaaagaattgtggAGAGAAATATCCAGAAAAGTTGGCGAAACTCCAAGCAATTGTGATAGAAAGTTTAGAAACTTAAAACAAACTTACCTTCGTTTAAAAATACGAGTAGATTCTGGTAGATCAGTAACAAAATGGCGTTACTATAAagaatttcaatcaatttttgAAAATCCCGCTTTCTCTATAACTGATGATGGACAGAATATTGTGTATATACCTCATCACCAGGACTATGTCAAACAACTTTTATTATTCTACattgaaaacaaagaaaaatttaaagatcCACTGGTAAAGAAAAAGCGTCTATGGAGAATGATTAGCCCCAAATTAGGTATATCTCCAGAGGAGTGtgataaaaagtttagaaatttaaaacagaCATTCATGCGCCTAGTAGAAAAGAAACGAAGAACAGGGAAAGTAAACTGTTGGAAATATTACTCagattttgtacaaatatatgATGAACCATTAAATGCGGAATGTAATTACAGTTGTAACTTGGGTGATGTCAATTTATCTGACATCAAACCTGTGGTAAATGCACAAGATAACCAAGACAGGGATAAATTTGGAAGACTTATTAAAACTATTGAAGAGTCAAATAACTTACAAAGGGAAAGAAACAAAATACTAAAAGCTCTTCTAGatagaaatagttttaattaa
- Protein Sequence
- MEVNNPQNHSYWFVVRENQSNVIFSSNNFTVQNPQRQEPRYGTDTSENHQYVQDVDGSAVVQDLAKIYDNESNNPPRRNDASWDVNKIKLLLTLCLDTRFKSDSNEMMWNEISLLIGTTPDECDKKYRSLRRIYIRLLKNKRLGKKIKWMFFNMCEDVFKDCKTLSSATLDPWEDAKVRKLLGLYIENLNKFQSSDCRQKDIWKEIASQLNTTDYNCYHKFKNLKRTYFNWLDKSGESGKVVKWPYHHYFERIFYNYKPNIGPWDKNKIKLLINAYAEIAGRFKDPKFQKKELWREISRKVGETPSNCDRKFRNLKQTYLRLKIRVDSGRSVTKWRYYKEFQSIFENPAFSITDDGQNIVYIPHHQDYVKQLLLFYIENKEKFKDPLVKKKRLWRMISPKLGISPEECDKKFRNLKQTFMRLVEKKRRTGKVNCWKYYSDFVQIYDEPLNAECNYSCNLGDVNLSDIKPVVNAQDNQDRDKFGRLIKTIEESNNLQRERNKILKALLDRNSFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00255601;
- 90% Identity
- iTF_00255601;
- 80% Identity
- -