Cvir027790.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- Arid4b
- Assembly
- GCA_002245475.1
- Location
- NJDC01011749.1:6012-16032[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-14 1.6e-10 41.8 0.0 2 84 290 380 289 382 0.78 2 2 4.2 1.5e+04 -2.9 0.0 5 20 413 428 412 436 0.77
Sequence Information
- Coding Sequence
- ATGcaaGGTGATGATCCTCCTTTTTTACCAGTTGGTACTGATGTCAGTGCCAAATATAAAGGAGCCTTTTGTGAAGCAAAAATCAAGAAAGTGGTACGGAACATTAAGTGCAAGGTAACACTGAAAGATGGAGGAGGGATCAACACTTATAATGATGATGTCATTAAGGGTACTCTAAGGGTGGGCAGCACTGTGGAAATAAGACCAGATCCGAAAAAAGAAGCAGTGGAGGCTGTCATTACAAAAATTCAGGACTGTAGTCAATACACAGTTGTGTTTGATGATGGTGATATCACTACATTGCGCAGATCAGCGCTATGTTTAAAAAGTGGTCGCCATTTTAATGAGAGTGAGACATTAGATCAACTACCATTGACACATCCCGAACACTTTTCTACTCCTGTTATTGCAGGCCGAAGGGGTAGAAGAGGACGAGCGCAGTCGGAGGAGAGCTCGGGGTCGACGGGCGCGCGCGCGGCGCCGGGCGGGGGCGGCGGTGGGGGCGGGGGCGGGGACGAGGAGCCGCACGTGGGGCGCGTGGTGGTGGTGGAGGCGGCGGGGGCGGGCGAGCGCCGGCGGCCGCACCAGCCCGCCTTCCCCGCGCTCGTGGTGGCGCCCACGCCGCAGATCAACGTCAAGGAGGACTACCTCGTGCGCTCCTTCCGGGACGGACGATACTACACGGTGCCGAAGAAGGAGGCGCGCGAGTTCCGGCGGGGCGGGGCGGCGGCCGAGTGGAGCGGGGTGGGGGCCGCGCTGCAGTACCTCGACCACGGCGTGCTGCCGCCGCACTGGGACCGGGACGCGCTCTTCAACGAGCCGCGGAACACCGACGACGACAGCTCGGACGACGAGCCGCGCGAGGAGAAGGACCACTTCGTGGCACAGCTGTACAATATTCAACGTGGCGTTCGGTTATCTACTATTCGTGGCGGACACAAATCCAACAAAACTACGATCCCTAAAATCGATAGTGACGTTTTTGATTTAGAAGGCCGCAGTCGGAAGGTAGTCCAAAAACTTGGTGGCTATAACAGAGTGACAAATCAAAACCAGTGGAAAACTATCGCAGACAAAATGGGCTTCCACCCCGTCACTACCAGCATCACCAATCTGTGCAAACAAGCatataaaaacaTACCGTTCCGTTCGCTAATCTATCAtgctgtttatttaataaagtccCGAGTcgatcccaggtcgggcaactcacGACGtgctctatcaattttcaggtTCCTGCACAGCTTCGAGGACTTCTACCGCAAGCTGGGCGTGACGTTGGTGGCGCACCCCCGCGGCGCTCGCACCCCTCCGGCGGGCCGTTCCCTCATCCGGGACCGGGACAAGCATCCCCCCTCCGCCTCGCACACCACGCGCAGCAAAGATTCAGATAAAAGTGAGACCGATAAAAGTGAGAAAAGCGAAAAGGAAgataagatagagaaaaacgagAAATCAAAAGACAAACCCCGCACCAGCGACGAGGATGACAGCGCTGACAACCAACCCCTTATTGCTGCAAAcccaaagtaa
- Protein Sequence
- MQGDDPPFLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKDGGGINTYNDDVIKGTLRVGSTVEIRPDPKKEAVEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSEESSGSTGARAAPGGGGGGGGGGDEEPHVGRVVVVEAAGAGERRRPHQPAFPALVVAPTPQINVKEDYLVRSFRDGRYYTVPKKEAREFRRGGAAAEWSGVGAALQYLDHGVLPPHWDRDALFNEPRNTDDDSSDDEPREEKDHFVAQLYNIQRGVRLSTIRGGHKSNKTTIPKIDSDVFDLEGRSRKVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKNIPFRSLIYHAVYLIKSRVDPRSGNSRRALSIFRFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKHPPSASHTTRSKDSDKSETDKSEKSEKEDKIEKNEKSKDKPRTSDEDDSADNQPLIAANPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -