Cvir019244.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- Kdm5d
- Assembly
- GCA_002245475.1
- Location
- NJDC01002664.1:85177-101409[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-25 6.2e-22 78.4 0.0 2 89 101 184 100 184 0.93
Sequence Information
- Coding Sequence
- atggGAAAATGTGACGAAGCAAATGTCGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCAGATAATTTTACATTCACCGTACCTCCTGAGGCTCCTGTCTTTGAGCCAACCCCTGAAGAGTTTCTCGATCCATTGGCGTACATTAGTAAAATAAGGCCAATTGCGGAGAAGTCGGGTATATGCAAGATAAAACCCCCCGCACACTGGCAGCCACCATTTGCTGTAGATGTTGATCGTTTAAGATTTACACCGAGAATTCAGCGGTTGAATGAGTTAGAgGCTATTACAAGAGTGAAACTAAATTTCTTAGATCAGATTATTAAGTTTTGGGAGCTACAAGGTTCTGTATTGAAGATACCTACTGTAGAACGAAAACCTTTGGATTTGTATGCCTTgcataaaattgtaaaagaagCTGgtgGATTTGAAATATGCTCTGCAGAGCGGAAGTGGTCCAAAATAGCCCAACGCATGGGTCACCCCCAAGGAAAAGGCATTGGGTCTATTTTAAAGAACCATTATGAGAGAATTTTGTACCCGTATGATGTGTTTAAGAATAATGGAGCAGTTGGAGATAATAAGGAAACGAAGATAGAAGTGAAAAGAGAGCAAACTCCTGAGAAGACAAACAATAGGCGGTCGAGTAGTAGGCCCCCGGCGGCGACACCGCCCCCGGCGCGGCGGTTCAAGCCCGCAGAGCCCGAGCCTGCTGAGGGGAGTCAGACCGAGGGGGCTTTACCAGCGGGCGATGATAAGAAGACACCCATCAAAGAAGAGCCGGGAGAAACTAGACGCAGTCCCCGTGAGAACAAGTGGATGTCGTCGGCAGGCAGCTGCGGGGCAAGGGCGCGCGTGTTACGCTCCACCCGCCTGCGGGAGCACCGTCTCAGCAACATGACCGTCTCCGTCACGCCCGCGCCGCCCCCGCCTCCGCCGCATCCTGATGATCCGGTAattaacacacatacacacacacacacacacatacatacacacacatacataaacacACTCACAGGCTTTGATAGATACATAGACGTACTTTTATATACTACATGGCTTTTcttcattattacaaaatatgattttgAATGA
- Protein Sequence
- MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEICSAERKWSKIAQRMGHPQGKGIGSILKNHYERILYPYDVFKNNGAVGDNKETKIEVKREQTPEKTNNRRSSSRPPAATPPPARRFKPAEPEPAEGSQTEGALPAGDDKKTPIKEEPGETRRSPRENKWMSSAGSCGARARVLRSTRLREHRLSNMTVSVTPAPPPPPPHPDDPVINTHTHTHTHIHTHTYINTLTGFDRYIDVLLYTTWLFFIITKYDFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01161097;
- 90% Identity
- iTF_00710814;
- 80% Identity
- -