Cnem025215.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- nfxl1
- Assembly
- GCA_002245505.1
- Location
- NJDD01010249.1:2768-5239[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.014 2e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 19 3.1e-07 0.0043 17.7 15.9 3 19 186 202 185 202 0.95 4 19 9.1e-09 0.00013 22.5 12.9 3 19 239 255 237 255 0.92 5 19 4.9e-06 0.068 13.8 6.5 1 19 290 308 290 308 0.98 6 19 1.6e-06 0.023 15.4 18.3 3 19 345 361 344 361 0.93 7 19 2 2.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88 8 19 1.9e-05 0.26 11.9 16.8 1 18 395 412 395 413 0.99 9 19 5.8e-09 8e-05 23.2 16.8 1 19 422 440 422 440 0.99 10 19 6.4e-05 0.89 10.3 4.3 9 19 488 498 486 498 0.90 11 19 0.059 8.2e+02 0.8 5.4 4 12 510 518 508 518 0.89 12 19 0.31 4.3e+03 -1.5 3.5 14 18 547 551 547 552 0.87 13 19 0.25 3.5e+03 -1.2 0.4 8 12 568 572 567 579 0.79 14 19 1.2e-05 0.17 12.6 4.2 1 11 588 598 588 599 0.97 15 19 0.49 6.8e+03 -2.1 1.5 14 18 612 616 612 617 0.85 16 19 8.6e-05 1.2 9.8 13.1 3 18 629 645 628 646 0.87 17 19 2 2.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71 18 19 3.3e-05 0.47 11.2 12.1 1 17 687 705 687 707 0.86 19 19 1.3 1.8e+04 -3.5 1.2 5 10 736 741 736 741 0.92
Sequence Information
- Coding Sequence
- ATGGCGAGGAGGTATCGCGACGCTGCCGCGAAACTACAGAGTAATGTTCAAAAACATTTGCAGGTGATGAAAGATTTGTCGTCCTCTGAAGACGAAGAACCGTTTGATTCGAATGTCCTGGAAGGTGTATTTCAGAATTACTGTAAAGGTGGAGGCGACAAACAATTGCTGAACAGAACAAAGAATCTACTAGAAGAAGCAATAAGTGGCCGTTCAGTAACTTGTCTCATATGTATAAGCTCTATCAAACGTGTTGATGCGATTTGGACTTGTAGTCACTGTTACTCATATTTCCATCTATCTTGTATACAAAAATGGGGTAACGATAGTGTAAGTTTGCGCAGTGAGGACAACTCTGGCCCTGTTACTGTATTTAGGCCCCAGAAAATAGAATGGTGTTGCCCTAAATGTAGAAATTCGTATAGCAAAGATGAAATTCCTCGTAAATACCGCTGCTTTTGTACAAAAACTGAAGATCCTCCATTTCATCCATGGCTACTTCCACATACATGTGGAGAAGTATGTGAAAAAAGACTCTCAGACGGTAATAATTGCAAACATAAGTGTCTCTTGTTGTGTCATCCTGGACCATGCCCACCATGTCCTCAAACAGTTAACAAAGTGTGTTTTTGTGAAAAGGAACATAAAAAAGTCAGATGTAGTTCATCAAGATGGTCTTGTGGAGCTCAATGTAAGCGATTGTTACTTTGCAAGtcacataaatgtgaaagtatatGCCATGATGGTGATTGTCCTCCTTGTAAATATACCAGCTTACAATCATGTCAATGCGGAGCTGAAAAATCCAAACGTCCATGTAATGACTTAATGTGGCagtgtaacaaaaaatgtaataggcAATTTTCATGTGGCTACCATATATGTGAAAAAATTTGTCATTTTGATGAATGTGGAATTTGCCCATTTTCTGGAGTGAGATCTTGTCCTTGTGGAGCTAATCAACGATATATTGAATGTCCAGATACAATTGAAACATGTCTTGGTACTTGCAATAAAAAGCAGGATGATTGTGAACATAGCTGTCCAGAAAAATGTCATAAAGGTCCTTGCCCTCCCTGTCAAGTTTTAGTTGAGAAGAAATGCGTATGTCAAACACACTTTAGATCTCTGCCTTGTAGTAGGGAATTCAAATGTGAAACAAAATGCAGAGGCATGAGACCTTGTGGTAAACATGTTTGTGGCCGTAAGTGCTGCAATGGAAGCTGCCCACCTTGCATAAAAATTTGTGACAAACCATTGCAATGTGGTCGTCATAAATGTACTTCTATTTGTCATCATGGGCCGTGCTATCCTTGTCCAAGAGAATCTAAGATTACATGCCGTTGTAAAGAAACTTACATTACAGTTCCCTGTGGCAGAGAAAAGCATGTAAAACCCCCAAGATGCAATTTAccatgtaaaattaaatacaaatgtgGTCACGTTGAAGATAACAAGCATGTATGCCATTTTGGCGACTGCCCTTCTTGCAAGGCAATTTGTAACAAGAATTATGAAAAATGTGACCATGTATGTAAAGCTATATGTCATGAATTTGTTTTAGTTGAgtttaaacaaatagaaaaaccTGCTACTCCCTGGGAAGTGCAACCTGTAAAAACGAAGATTGTAAAATTAGATTGTCCTCCATGTGAAACACCAGTGGAAGTAATATGTTTTGGGGAGCATGAAACAGAGACTCAACCTTGTCATACAGCTTCTAGAAGGCCCTGTGGACGCGAGTGTGGCAAACCACTTTCTTGTGGAAATCATTCTTGCAGTCTACTTTGTCACTTATATAAACATGATCCAGCTTATCCATCAGTGCCTTATAATTGCAAACCGTGTGATAGAGCCTGTTCTGTTATCCGTCCAGAAAAGTGCACTCATAAATGTGCATTACAGGCTTGCCACCCAGGTGCATGTCCTCCATGTAATTTATTAGAACGTATACCATGCCATTGTGGTGTCGCAGATATATATTTACGTTGTTCGGAAATTGCAACAGCTACAGAAGAGATTCTAAGTTGTAAGCAACAATGTCCAAAGACCTTAGAATGTGGGCACCGCTGTAAGAATCAGTGTCATTCTGGAATATGTGGATCCAATCAAACTTGTACTAAGAAGACAAAGATCTATTGTCCTTGTGGTAATTTAAAGAAAGAGGCACCTTGTAATGTTGTAAGGAAACAAGAAGTGAAGCTTACTTGTAATGAAAGTTGTGAAGCTAAAAAACTTGcagcaaaaatagaaaaagagaaAGAAGAGCAGAGACTTAAAGAATTGGAGGACGAAAAAAACCGAAGAGAACTTGCTGAATATGAATGGAAATTAAgtgagaagaagaagaaatataaagaaaagaaGGTTGTGGTTAATGTAGACACTCGAAATTGGCTTCAAAGATATTGGGTTCCTATTTTAGCTGTACTTGTAGGATTAATTTCCAGTGTTTATATCCTTAGCATTTAA
- Protein Sequence
- MARRYRDAAAKLQSNVQKHLQVMKDLSSSEDEEPFDSNVLEGVFQNYCKGGGDKQLLNRTKNLLEEAISGRSVTCLICISSIKRVDAIWTCSHCYSYFHLSCIQKWGNDSVSLRSEDNSGPVTVFRPQKIEWCCPKCRNSYSKDEIPRKYRCFCTKTEDPPFHPWLLPHTCGEVCEKRLSDGNNCKHKCLLLCHPGPCPPCPQTVNKVCFCEKEHKKVRCSSSRWSCGAQCKRLLLCKSHKCESICHDGDCPPCKYTSLQSCQCGAEKSKRPCNDLMWQCNKKCNRQFSCGYHICEKICHFDECGICPFSGVRSCPCGANQRYIECPDTIETCLGTCNKKQDDCEHSCPEKCHKGPCPPCQVLVEKKCVCQTHFRSLPCSREFKCETKCRGMRPCGKHVCGRKCCNGSCPPCIKICDKPLQCGRHKCTSICHHGPCYPCPRESKITCRCKETYITVPCGREKHVKPPRCNLPCKIKYKCGHVEDNKHVCHFGDCPSCKAICNKNYEKCDHVCKAICHEFVLVEFKQIEKPATPWEVQPVKTKIVKLDCPPCETPVEVICFGEHETETQPCHTASRRPCGRECGKPLSCGNHSCSLLCHLYKHDPAYPSVPYNCKPCDRACSVIRPEKCTHKCALQACHPGACPPCNLLERIPCHCGVADIYLRCSEIATATEEILSCKQQCPKTLECGHRCKNQCHSGICGSNQTCTKKTKIYCPCGNLKKEAPCNVVRKQEVKLTCNESCEAKKLAAKIEKEKEEQRLKELEDEKNRRELAEYEWKLSEKKKKYKEKKVVVNVDTRNWLQRYWVPILAVLVGLISSVYILSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00257487;
- 90% Identity
- iTF_00257487;
- 80% Identity
- -