Basic Information

Insect: Calephelis nemesis
Gene Symbol: -
Assembly: GCA_002245505.1
Location: NJDD01003486.1:101940-119456[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 8.7e-05 0.0073 17.3 4.4 1 23 418 440 418 440 0.98

2 9 0.1 8.4 7.7 3.8 2 23 448 470 447 470 0.94

3 9 0.0041 0.35 12.0 0.4 1 23 474 496 474 496 0.98

4 9 0.00048 0.041 15.0 4.7 1 23 501 524 501 524 0.98

5 9 1.2 97 4.3 0.9 1 23 528 551 528 551 0.76

6 9 0.004 0.33 12.1 0.2 2 21 563 582 563 587 0.92

7 9 2.2 1.9e+02 3.4 3.2 1 23 661 681 661 681 0.88

8 9 0.058 4.8 8.4 0.4 2 23 687 708 686 708 0.93

9 9 0.0065 0.55 11.4 0.3 1 23 714 737 714 737 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	8.7e-05	0.0073	17.3	4.4	1	23	418	440	418	440	0.98
2	9	0.1	8.4	7.7	3.8	2	23	448	470	447	470	0.94
3	9	0.0041	0.35	12.0	0.4	1	23	474	496	474	496	0.98
4	9	0.00048	0.041	15.0	4.7	1	23	501	524	501	524	0.98
5	9	1.2	97	4.3	0.9	1	23	528	551	528	551	0.76
6	9	0.004	0.33	12.1	0.2	2	21	563	582	563	587	0.92
7	9	2.2	1.9e+02	3.4	3.2	1	23	661	681	661	681	0.88
8	9	0.058	4.8	8.4	0.4	2	23	687	708	686	708	0.93
9	9	0.0065	0.55	11.4	0.3	1	23	714	737	714	737	0.93

Sequence Information

Coding Sequence: ATGCCAGCAGCTTGTGTGGTAGTTAGTTGTAAAAGTGGGACCAGTCTCACGAGATATAAATCTAGCGGTGTAACCTTCCATAGATTCCCAGAAATCAAAGAAGTGAGAGATGCTTGGATAGAGTTTGTCCGTAATAACCGTAACGATGCATCATGGCTACCACCTGACTCTCCTTGTATTTGTTCATTACATTTTCTAGAGCAGGACAAACATTACACTGAAGGTGGGAAAATTCGTTTAGCAAGAAATGCTGTTCCATGGAATAACATATTCAAAGCTCAACCACCAGCTCCTTCCAATGATCAGATGAAGATGGaatttaataagaataatGAACCTGATTCTGTAAACGGCATTGCAGTAAAGAATGTGTGTAGGATATGCCTCGCGTTTGGTGTCAGAATGTTCAACATCACAGAAAGAAGCTTGTATCAAATATACAGGAGCGTCACCggaatatttATAAAGCCAGACCAGTTACCGAAGATGTTGTGTTGGGAGTGCACGGCGAGACTGAAGTCCGCTCAAATGgtaaaaaacaaagcaaaggCGGCCAACGAATTCCTCTTAAACTTGACTAAAAGGAATAGTTATatTACAAATAGCGTTATGCAGAATGTTGCGTATAAATTTAAGTCTAGTCTTACTAATAAATGTTATACCGATCACTATGACTTGATAATGCAAGATAAAATTGAATACGAAAATGTAAAAGATGAATGCAAAATAGAACACGAATCTCAAGATGCTGCtacattaatgtttaaaaatatttataatgacaTAGAAATGCTTGGTGTggaaaaaaatgatattgaaatgcttaatgttaaaaaatatgacacaGAAAAACATAAAGCAAAAGGCGTTGTAAACGGCCGTACTGAAAATAgtgattttaaaatagattttaacaGTGATACAAGTGAAGTATACATAactgaaaatattaaacttgAACACAAGAATAATGTTATTGAAGTAGGGGAAAAGGAATTAGTTAAAAAGAAAGCAGGAATCAACGGAAAACGAAAGAGTTCTGGCAAGAAAAGAGTGACAGGAGTTAAAAGAGCTCGTGTGAGAAAGAAAAGTGAACCAAAACTAaagaaaaaaatatctaaacaagGTAGTAACAGAATATTTCCACGTGCGTATTTTCTAAGCCACCAAACCGTGAAGCGGCTGAGCTACGAGCAGCAACTCGCCGACTTGGAGGAACGTCAGGAGTCTGACGCCTACCTCAACGCTGTACATAAGTGCACCATATGCTACGAAGTCTTTAACTACGAACACTCACTGCAGAGACATATGATTAGACATACTGATGTGCGCGGGAAGCTGGAATGTGCGATGTGTAGATTCCGGTTCAACACTAAAAAACGTCTCCATAATCACATCAAAGATAAACACACTCAGGAGTTTATCTGTAAGACATGCGGCTACGTCACTCCGTCCAGGTACAAAGCAAGCGATCACATAAGATCTCACTTGGGAAGATCATTCACCTGCCAACATTGTGGTAAGACGTTCCTTCGTCGGTCTACATATTTCATACACGTCCGCATGCGTCACCCGTCGCGGCACGTCTGCAACCTCTGCGGGTACGCGTTTTTAAGCGAAAAGGGGGTGTTCGTGCATAAGGACAAACGTCACACCAATGAAATTACGGAAAAGGTCGAAGGACCGTATTGTGAGACTTGTAATGTCAGATTCGCGAACCAGGACGCTTTTGACAGACATATGCTCGTGTCCTCAATGCATACAGACGAGAAGACGCTGAAATCTGTTAAAAATGTTGACGAAAAATATTACCGGCGCTGGAGCTATAAGAAAGTAGGGAAAGGAAACCGCTGGGGAAAGCCGTGCGAAGTgTGCGGGGAAGTGCAGTCGTGCTTCGCAAGCTACAAGAGGCACGTGGAAACCCAACACCCGGGACATAAGCAAACCAAACATATATTCAAGCCTATCTCGAATACACCACATATGTGTGAACTGTGCGGGAAAATTGTTAAGACTCACATGAAGTACCACATGCTGGTCCACACTGGAAAGAAGGTCCAGTGCCCTCACTGCGAGGTCAGCCTCATGTCCTACAACCTGCGGCGGCACGTCGACTCGGTACATAAGAAAATATTGAGGTACCCGTGTTACATTTGTGGCAAGAGCTTGACCACGGAACAGGGCAGGAAGGCCCACATAGCTCACGTGCACCAGGGAGTGCCGAGACCGAAGAGGGTGCGGGTTCGAGTCCCACCCGACACGGGAGAGATGGCCGTGAAGTGA
Protein Sequence: MPAACVVVSCKSGTSLTRYKSSGVTFHRFPEIKEVRDAWIEFVRNNRNDASWLPPDSPCICSLHFLEQDKHYTEGGKIRLARNAVPWNNIFKAQPPAPSNDQMKMEFNKNNEPDSVNGIAVKNVCRICLAFGVRMFNITERSLYQIYRSVTGIFIKPDQLPKMLCWECTARLKSAQMVKNKAKAANEFLLNLTKRNSYITNSVMQNVAYKFKSSLTNKCYTDHYDLIMQDKIEYENVKDECKIEHESQDAATLMFKNIYNDIEMLGVEKNDIEMLNVKKYDTEKHKAKGVVNGRTENSDFKIDFNSDTSEVYITENIKLEHKNNVIEVGEKELVKKKAGINGKRKSSGKKRVTGVKRARVRKKSEPKLKKKISKQGSNRIFPRAYFLSHQTVKRLSYEQQLADLEERQESDAYLNAVHKCTICYEVFNYEHSLQRHMIRHTDVRGKLECAMCRFRFNTKKRLHNHIKDKHTQEFICKTCGYVTPSRYKASDHIRSHLGRSFTCQHCGKTFLRRSTYFIHVRMRHPSRHVCNLCGYAFLSEKGVFVHKDKRHTNEITEKVEGPYCETCNVRFANQDAFDRHMLVSSMHTDEKTLKSVKNVDEKYYRRWSYKKVGKGNRWGKPCEVCGEVQSCFASYKRHVETQHPGHKQTKHIFKPISNTPHMCELCGKIVKTHMKYHMLVHTGKKVQCPHCEVSLMSYNLRRHVDSVHKKILRYPCYICGKSLTTEQGRKAHIAHVHQGVPRPKRVRVRVPPDTGEMAVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00256985;
90% Identity: iTF_00256985;
80% Identity: iTF_00255978;