Cnem020466.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- zfy1
- Assembly
- GCA_002245505.1
- Location
- NJDD01003395.1:43358-70909[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0018 0.15 13.2 3.4 1 23 295 318 295 318 0.96 2 11 1.6 1.3e+02 3.9 0.4 1 23 325 347 325 349 0.91 3 11 0.014 1.2 10.4 3.0 1 23 351 374 351 374 0.98 4 11 0.77 64 4.9 0.9 1 9 381 389 381 403 0.75 5 11 1.2e-05 0.00097 20.1 0.5 2 23 408 430 407 430 0.92 6 11 0.00032 0.027 15.5 0.7 1 23 436 458 436 458 0.97 7 11 0.0017 0.14 13.3 1.6 2 21 471 490 471 495 0.93 8 11 0.0012 0.1 13.7 2.0 1 23 503 526 503 526 0.94 9 11 2.6e-05 0.0022 19.0 2.1 1 23 531 554 531 554 0.98 10 11 1.5e-06 0.00013 22.8 0.7 3 23 563 583 562 583 0.98 11 11 1.5e-06 0.00013 22.9 2.9 1 23 589 612 589 612 0.96
Sequence Information
- Coding Sequence
- ATGGATGTTAAGGAAGAAGgcaatagttatttattatgtatggcCTGTTTATGTGTGGGGAGAACCATAAAGATAATAACGGATGATAAACTTAGGCAATATTATTTCGATACTCTAAGAGAAATTCCGCTGTGTGATGTTCCACAAGTTGTGCCTAATGTTTGTTGGGAATGTGAGGCACTTTTGCGTAAAGTGCTAGCATTTAGGGAGCAGGTAAAGGACTCCTACAGGATACTACAGACTTATACCAATGAGATTCTCCATGAGTGCCTTCTTAGTGATGTTTCTCGACCTCCAAGATTAAAGATACACAAAATTGACCCAATATCTATCAAACCTTTGGCAAATAATGATAGTGTCAAGAGTGAAGAGGATATGAATGATGgaaacaTCCTAAAAAGAGAAGAATATAATGTGAGTCCTTTATCAAATAAGACTGAAGAAGAACAGTTATCAGAATTGTGTCAAATTCCAAATAAACAGcaAACTAAAGTAAAAAGGAAAGCTGGATTGAAAAAAGAAACTGTCTCATCAATTCCGGAAATAGAGAAGTGTGAAGTGGATCAGCTAGATAGTGATGATAGCTACCAGGACGACGATATCGATGGTATTGCCAGTGataATTCTGAAGAATTTAATGTTATGAAAATTGAAGTGGATGTCATAGACTCTAAGGACCAAGTGAAAAACGAATTCAAACAAGAAATCACAAAGATCACAAAAGAAAAAAGAGTGAAACCAACCAAGAAGACTGATAAAAAGataTTAAAAGCATCGAAAAACCTCTACAAGCAGAAGATTCTAACCATAGAACTATCGTATGAAGAAATGTTGTCTGAAAGGACCCAAACCGCTCAGAGCACTTCGTTTATTAATGCTCAATACAAATGTGCCAGCTGTCTCCGTGTGTTCCGTAATCCTAAACATTTGAAGGAGCATAACAAGTCTAAACATGCACCGGAATTGGGTGAATATATATGCCCTATTTGCTACGTCATCGAGTCTTCAATAAACACTTTTAAAGCGCACTATAAGAGACATACAAGAAGGTTTGAATGCGACGTGTGTCACACGCGGACAACGGACCTGAATACGATGTACAAACATCTACAGACGCGACACTCCATCCCGTGTGGCCTTTACACCTGCAACATCTGTGGAAAACTTTCCAATTCCATAGACACGCACCGGTACCACAAGGACTCGCACAAGACGCGTGTTCCGTGCAAGGACTGCGACAAGACTTTCAGCCACCGAGCTGGACTGATGAATCATAGACTAGCAGTCCACGAATCTCAGAACCAGTTTCCCTGCACGGCGTGTGATAAGGTGTTCCGATGGAAAACCAGCCTCAACCGCCATCTTGAGAAACATCGGGGCAAGAACCCGGATACGGTGGTCGGTAAGGCGTACTGTTCAGATTGCGACATCGGCTTTTCGTCTGTCTGTTCCCTTCAGCGACATCTTCGTAACAGCCTAAAACATGTCACGCACGACCAACTCAAATTCATATGTGACCATTGTCAAAGTCGTTTCGCTGACAAAACCAAACTACGGAACCACATCGAAGAGAAACATTTGCACAGGACTTACCAGTGTCATATATGTCATaaaCCTTCGAAGAATCGTGTGGGCTTGGAACAACATATACGTAACGTGCACAAGGGACGACCCAATAACAAAATTTGTCATCTCTGCGGCAAGGGGTTCCCGACGAAAGTCCAGCTGGAGTCGCACATCAGGTCGCACACGGGCGAGCGGCCCTTCATCTGCGAGTACTGCCCCACCACATTCTCCCAGCAGTCCAACTTGTACAAGCACCACAGGCAGgTACATATGAATATAAAATCGAAGAAATACGCAATGTGCAAGAAAAGGAAAGTCGAAAGGAATCAAACCGACAACCCCCCGACTGTCGAACACGGATTCACG
- Protein Sequence
- MDVKEEGNSYLLCMACLCVGRTIKIITDDKLRQYYFDTLREIPLCDVPQVVPNVCWECEALLRKVLAFREQVKDSYRILQTYTNEILHECLLSDVSRPPRLKIHKIDPISIKPLANNDSVKSEEDMNDGNILKREEYNVSPLSNKTEEEQLSELCQIPNKQQTKVKRKAGLKKETVSSIPEIEKCEVDQLDSDDSYQDDDIDGIASDNSEEFNVMKIEVDVIDSKDQVKNEFKQEITKITKEKRVKPTKKTDKKILKASKNLYKQKILTIELSYEEMLSERTQTAQSTSFINAQYKCASCLRVFRNPKHLKEHNKSKHAPELGEYICPICYVIESSINTFKAHYKRHTRRFECDVCHTRTTDLNTMYKHLQTRHSIPCGLYTCNICGKLSNSIDTHRYHKDSHKTRVPCKDCDKTFSHRAGLMNHRLAVHESQNQFPCTACDKVFRWKTSLNRHLEKHRGKNPDTVVGKAYCSDCDIGFSSVCSLQRHLRNSLKHVTHDQLKFICDHCQSRFADKTKLRNHIEEKHLHRTYQCHICHKPSKNRVGLEQHIRNVHKGRPNNKICHLCGKGFPTKVQLESHIRSHTGERPFICEYCPTTFSQQSNLYKHHRQVHMNIKSKKYAMCKKRKVERNQTDNPPTVEHGFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -