Cnem006003.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Calephelis nemesis
Gene Symbol
-
Assembly
GCA_002245505.1
Location
NJDD01003933.1:327924-343396[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 2.5e-08 1.1e-05 26.0 4.5 1 44 112 155 112 155 0.93
2 7 3.3e-08 1.4e-05 25.6 6.8 1 44 219 270 219 270 0.95
3 7 7.7e-11 3.3e-08 34.0 6.0 3 44 299 340 297 340 0.96
4 7 3.8e-07 0.00016 22.2 2.5 2 39 400 437 399 442 0.92
5 7 5.5e-09 2.3e-06 28.1 8.2 3 44 492 533 490 533 0.95
6 7 2.5e-10 1.1e-07 32.4 7.6 3 44 596 637 594 637 0.96
7 7 3.9e-14 1.7e-11 44.6 2.3 1 44 699 743 699 743 0.96

Sequence Information

Coding Sequence
atgatattccTCGAAGTAAAACAATATGTCAATTTTCTTACAGTTGAGGTGATCACTATGATGAACGGACGGACCAGTATAGTATACGACGGCCATACTTTTTTCTATAGGTATACGATGCAACACACTCAAAGAGAAAAGTGGTGTTGTACTCGGTTCCCTAAGTGCAAAGCGTATTTGTTGATACGCGACCAGGATATAGGACAAGATTCCATGTTGCTGCATAATCATGAGAAGGACAAAATTTTCATGTGCTCCAATGGCAGATACGCGAAATTAAGGAATGATTCAGAATCAGATTATGAAGATGTCCCTAGTAAAAGCCGAGAAAAAAGCTCTGTCTggtattactttaaaaaaagtaaatatgttcATGCTGGAAAATGCAGTATCTGTGGAAAGATTTTGAAATGCACTTCTAGCAGCACCTCGGGGCTGTTGAGACACTTAAAGCTAAGACACAATATTATTCTTGAAAGTGAAAGCCCTGGTCCTGACTGTTCAGAAGTAACGACAAAAGATATAGAAGATGAAACACCTGAAGAGAAAAATGAATCAAATGCTAGTGAATCGCTTGAACAGAGTATTGCAAAACAAGAAATTGTGGattCAGATACTGATTATGAAGAAGTCACTGTAAAAAGCGTGAACCAATCATCAGTTTGGCGTTATTTCCAAAAAAGTATAGATAAAAACAAATCCAAAGGTCTACATAAGAAAAAAGCAAAATGTAAACTTtgtcttaaaattttgaaatgtaccAACGGATGTACCACAGGTCTACAGAAACATTTGAAGTATATTCACAAGAAAGAATTCATAGATgattacttttttatagatttcGAATCTGATTTTGAAGATGTACCTTTCAAAAATTTGGACCCTCAATCAGTTTGGTATTACTTTCGGAAAAGCAAGGACAAGCGCACAGCGAAATGTACGCTTTGTGGACGAGTCCTAAAATGCTCGGGGGGCACCACAACCTGCTTGAAAaaccatttaaaatataagcacAAGGTAACATTTACCAAAATTACCAACTCTGATGCAGTGTCTTCAGACGGTGCATCTTCTTCGGAAGAGGAAGAAATTCTCAAGAAATGTTCTAAAACAAGTGTCTTTTCTCCATCTCAATTGCAGGAAGATTCAGAATTTGATTTCGAAGAAGTCCAcgaaaaaagcaaaaacattaACTCAGTTTGGtattacttcaaaaaatgtaaagctaAGCAAACCGCAAAATGCAATCTTTGCGGGAATATTTTGAGATGCCCTGAAAGCACCACAACGAGCTTACAAACTCATTTGTTGGGTATTCACGATAAATTACTTAAACCAAGTCCATTAGAAGAAGGGGAAGAAGATATGCTTGACACAGAATCCAAATTATCCACTCCTCCATCTGAATGGCCACcagATTCAGATTCGGACTACGAAGAAGTGCCTGTAAAAAGCCAAAATGTAAAATCAGTTTGGtatcattttagaaaaaataaagacaaacaaacTGCCAAGTGTAAATATTGTAGGAATATTTTGAACTGCAATGGAGGCTGCACTTCTGCCTTACAAAAACACTTAAAACGAAGTCATAGAGAAAAAATTAACAGAACAGAATTGCCAACGTCAAGTCCTTCAGGCATTGCGCAGTCGGAAGCGGAAGAAGAAATAAAGATTGAAATACCAAATACTGAATCGTCTAACTTATCTGAATCTGACGTGTTACAAGaTTCAGATTCGGACTATGAAGAAGTGCCTGTAAAAAGCCAAAATATAAAATCAGTTTGGtatcattttagaaaaaataaggaCAAACAAACTGCTAAGTGTAAATATTGCAGGAATATTTTGAGCTGCAGTGGAGGCTGCACTTCTGCCTTACGAAACCACTTAAAACGAattcatagagaaaaaaataatagaacagAACTGCCAACGTCAAGTCCCTCAGTCATTGCGCAGTCGGAAGcagaagaagaaataaaaaatgaaataccaAATACTGATTCGCCTAACTTATCTCAATCTGAATTGTTAAAAGTTTCTGATACTGAATATGAAGAAATCTATGATAAAAACCGGATAGGCCAATCGGCTGTTTGGAATTactttcaaagaaataaaaaagacaaagagAAAGCAAAATGCAAGATTTGTTTAAGAGTTTTGTCGTGCAATGGTGGTACTACTTCAGGATTGATGAATCACCTAAAAAAAATCCACAATAAAGAATTTGTAGACGTAGTCATCGTGACTGAAACTCAAACATAA
Protein Sequence
MIFLEVKQYVNFLTVEVITMMNGRTSIVYDGHTFFYRYTMQHTQREKWCCTRFPKCKAYLLIRDQDIGQDSMLLHNHEKDKIFMCSNGRYAKLRNDSESDYEDVPSKSREKSSVWYYFKKSKYVHAGKCSICGKILKCTSSSTSGLLRHLKLRHNIILESESPGPDCSEVTTKDIEDETPEEKNESNASESLEQSIAKQEIVDSDTDYEEVTVKSVNQSSVWRYFQKSIDKNKSKGLHKKKAKCKLCLKILKCTNGCTTGLQKHLKYIHKKEFIDDYFFIDFESDFEDVPFKNLDPQSVWYYFRKSKDKRTAKCTLCGRVLKCSGGTTTCLKNHLKYKHKVTFTKITNSDAVSSDGASSSEEEEILKKCSKTSVFSPSQLQEDSEFDFEEVHEKSKNINSVWYYFKKCKAKQTAKCNLCGNILRCPESTTTSLQTHLLGIHDKLLKPSPLEEGEEDMLDTESKLSTPPSEWPPDSDSDYEEVPVKSQNVKSVWYHFRKNKDKQTAKCKYCRNILNCNGGCTSALQKHLKRSHREKINRTELPTSSPSGIAQSEAEEEIKIEIPNTESSNLSESDVLQDSDSDYEEVPVKSQNIKSVWYHFRKNKDKQTAKCKYCRNILSCSGGCTSALRNHLKRIHREKNNRTELPTSSPSVIAQSEAEEEIKNEIPNTDSPNLSQSELLKVSDTEYEEIYDKNRIGQSAVWNYFQRNKKDKEKAKCKICLRVLSCNGGTTSGLMNHLKKIHNKEFVDVVIVTETQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-