Basic Information

Gene Symbol
-
Assembly
GCA_002245505.1
Location
NJDD01000105.1:110045-116734[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.5 2.3e+03 -0.6 0.0 23 42 342 360 310 364 0.73
2 6 0.00035 0.54 11.0 0.6 16 44 429 462 411 464 0.75
3 6 0.088 1.4e+02 3.3 0.0 27 45 593 610 567 611 0.84
4 6 0.00045 0.7 10.7 0.3 3 44 662 712 660 714 0.79
5 6 0.00011 0.18 12.6 0.0 23 45 851 873 832 874 0.80
6 6 3.3 5.1e+03 -1.7 0.2 3 14 1010 1021 1009 1031 0.86

Sequence Information

Coding Sequence
ATGGAGCAATTAGTGATAAAAACTGAAATGCAGCCGAATGGAGATATATTACTTTACTATGTAGATGaaaataatgaagaaatagATTCAGCAGTACTTGAACAGGATGATTTACAAATGCAACCAGAAACCAAGTATATAATTGAAGATAATGGAGAAGGAGAGTCAGCAGATGAATTAGATATTGCTCAAGCAACTGAACAAGTTTCAAAAGAAATATGGTCAGATGACGACATTAGTagacttttaattttctatatagacaataagaaaacttttttggaTGGAGCAactaagaaaaaacatttatggGCTGTTGCATGTCGAACTATGCTTACAGGAAAAAATCCATTGTCATGTGAAATAAAACTCAGAATGCTTAGAAAAGAGTATACtgaattttgtttagaaaagcTTAAAGGAGGTTCTATTCAATggccatattttaatatttgctatcaAGCTTTCCGTGATGATAGTATTATTAATGCTGCTGTTAGTGAAAACGCTAATGACAACTTAATATATGATGTACCTGTTACTCAAATTGTACATGAAGATGGGATTTTGGTTTCTAAGACACCAAATGTCGGACATGTCGATGAAGATGTTGAAAATATGcttaaaatgtacatcaaacataaagatatgtttccaaaaattaatttaactaaaagtaTCTGGGAAACAATAGCATTAGAAATAGGCCATGAAAGTGCTGATTATTGGcacaaaagatttttaaattttaagcaacATTATGTAAGATTGTTGTAtaagagaaatgaaaatggcccTGAAAACACAAATTGGCGATATAAGAAATACTTTGATCAGATATTTGGAGATGATATGGAGTTTCAACAAAAATACTTTCCTCAACTTATCAACAATGTCGACTGTCAAGTTCATATCAAAACTGAGACAAATGTTTGGAGTAATACAGAAAAAACATTCTtagtaaagtattattttgatagttttaatgaatttcaagATCCCTCTATACCTGATAATTTTTTATGGCATGATGTAGGTAGACTGTTAAATAAAGATCCAGAAAGTTGTCACATAAAGTATGAAGAACTGAAAGAAGGTCATTTTAACTTGCTTAAATCTGGAAGTTATGATTTACCAAACAGGATGCCATTAGCTATATTATTTGACAGTATAATTGCTAGAGAAGCTGAAATAGAAATTTCGAAAACGATAAGAAGTGCTGATGTGAATGACAGGTGGAAAACAGAACAAATAGATGAATTGGTACAATATTTGTATGACAATGTACATATGTTCAAAGACTCAGTTTGTTACTATGTTTGTTGGGCAATTATTgctaaacaaatacataaaagcATAAAGGCTTGTAGAAAACAGTGGAATGATTTGACCTCATTGTATAAATCCATTTTGGAAGACAAAAAAGAGAATCCAGACAAGCAAATTGATTGGAGATACATTGATTTGTTTGATAGGATTTTTGATTATGGTATGGATACTAATTTACTAAATGGGTatgaaaaacttaaacaaatgAGTCAACTCAAAGGATCTGAAAAAGTTGTTGCtaaaaaattgacaataaaAGATATTGATGAACAGTTTAAAGAAAATGGTTCAGATGATGAAGAAAGTTATGATGAGAGAGGTTTTATGAAACGCACAAAGAAAGGCTATGGCGATAAGAAAGCATTTCATATATTAGATTACTATCTTAAGCATAAAgacaaatttgcatcaagtcATCATAAAAAATTGTCACTGTGGGAAGTTCCAGCAAAGCAAATAGGCATAACACCTTCAGAATGTGCACATAGGTTTAGGAATTTTAAGCAGGTTTACACATCATATGTTCAGAGAGAGATAACAAAACCCGAAATGCCAATACTTTGGCCATATTATGGACTTTGCAAAAAAGTTTTTGGATATAGAGCCATTAAATCTAAATTGAAGAATGGGAAGATGGATTCAGATGATGCAGAAGACTGGACTGCTAGGgatattaaaaagttgattaagTATTTTGCCAAAAATAGTCAAGAATTGATTGAAGACCCTGAAGAAACATCAAAATGGGCTGATTTGGCAAAAGAATTGGGTAAAACTGAAATTAGTTGTTGTGAGAAATTTTTGGAACTTAGAAAATCGTATAGAAAATTAAAGACAATGAAATCAAGAAATCCTGATGTAAAGGTGtcttggaaatattttaatatgattgaTGATGTTTATAATAACACAACTCAAAATACTGAGGTTTTAGAAAATATGCATGTAGACGAAAATTCCTTTAACTATGATGTTGATCAAAAAATTGAACCACAGGaTGAAGATTATCAATGCATCATTGTGATGCCAGAAGGTGAAGACGATATCTTTTACCAAAATAATTATTCTGAAGCAATTGAAGAGGAAGTGAAAGAAATACTAGAAGTTCCATTTCAACAAACTAGAAGAATGTTTACATGGAATAAACGTAGCAAAAAACGTCTCCTAattttatgtttgaagtatctaAGAACACATGAAAATATAATTCCATCTGAAATGTGGACTGAAATAGCATCAAACATGGATGATAAAACAGCTAAAGCGTGTAGAAATATGTATTTGAAGttaaaaaacaatcataaaTTAGCAAATGAAGAAAAAACACCTTATTCTTTATTACTGGATAAGATATTGGCTATAAAACGTAAAAAGTGTATATTACAAGAGAATAAATCGTTTAAAGATGTTATAATATCAGATGAAAAGGTTATTAAGGCATTggaatattatttagaaaatctaGAAGACTTTATAAGTCCAAAGTTTGAGAAAAAAGTCCTATGGGGCGAATTAGCGAAACATGTGACAGAGCCTGTAgtgaaagtttttaataagataaattatttgaaacagaATTTCGATGATGCTTTAGATTCGCCCATAAATGATTTACTAAGAGATATATTTGCAAAAGAAAATAGTCTTAAAAGCATTGCGAATACAAGTGATAATTCTATAACAGAAGATGAAAATGTTACTTGGTCAGATGTTGAAACTGAGCGACTGCTAACTTGGTATTTAGCTCATTTAGATAAGTTTAAGAATCCGAAATTTATAAGGAGTTACTTATGGATGGAAGCATCGGATATATTGAAGAAGAGTCCTTTAGCTTGTTCAAAGAAAATGTTAGAAATACGTTCTGAATATAGAAAAatggtaaaagaaaatttggaggATTTGGAAAAGTGGCGGTTTAACAATTTATGTCAGAGGATTTATGGCaccggtaaaaaataa
Protein Sequence
MEQLVIKTEMQPNGDILLYYVDENNEEIDSAVLEQDDLQMQPETKYIIEDNGEGESADELDIAQATEQVSKEIWSDDDISRLLIFYIDNKKTFLDGATKKKHLWAVACRTMLTGKNPLSCEIKLRMLRKEYTEFCLEKLKGGSIQWPYFNICYQAFRDDSIINAAVSENANDNLIYDVPVTQIVHEDGILVSKTPNVGHVDEDVENMLKMYIKHKDMFPKINLTKSIWETIALEIGHESADYWHKRFLNFKQHYVRLLYKRNENGPENTNWRYKKYFDQIFGDDMEFQQKYFPQLINNVDCQVHIKTETNVWSNTEKTFLVKYYFDSFNEFQDPSIPDNFLWHDVGRLLNKDPESCHIKYEELKEGHFNLLKSGSYDLPNRMPLAILFDSIIAREAEIEISKTIRSADVNDRWKTEQIDELVQYLYDNVHMFKDSVCYYVCWAIIAKQIHKSIKACRKQWNDLTSLYKSILEDKKENPDKQIDWRYIDLFDRIFDYGMDTNLLNGYEKLKQMSQLKGSEKVVAKKLTIKDIDEQFKENGSDDEESYDERGFMKRTKKGYGDKKAFHILDYYLKHKDKFASSHHKKLSLWEVPAKQIGITPSECAHRFRNFKQVYTSYVQREITKPEMPILWPYYGLCKKVFGYRAIKSKLKNGKMDSDDAEDWTARDIKKLIKYFAKNSQELIEDPEETSKWADLAKELGKTEISCCEKFLELRKSYRKLKTMKSRNPDVKVSWKYFNMIDDVYNNTTQNTEVLENMHVDENSFNYDVDQKIEPQDEDYQCIIVMPEGEDDIFYQNNYSEAIEEEVKEILEVPFQQTRRMFTWNKRSKKRLLILCLKYLRTHENIIPSEMWTEIASNMDDKTAKACRNMYLKLKNNHKLANEEKTPYSLLLDKILAIKRKKCILQENKSFKDVIISDEKVIKALEYYLENLEDFISPKFEKKVLWGELAKHVTEPVVKVFNKINYLKQNFDDALDSPINDLLRDIFAKENSLKSIANTSDNSITEDENVTWSDVETERLLTWYLAHLDKFKNPKFIRSYLWMEASDILKKSPLACSKKMLEIRSEYRKMVKENLEDLEKWRFNNLCQRIYGTGKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00256871;
90% Identity
iTF_00256871;
80% Identity
-