Cnem027277.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- arid5b
- Assembly
- GCA_002245505.1
- Location
- NJDD01004389.1:55276-69168[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-14 2.2e-10 41.4 0.1 2 89 226 300 225 300 0.91
Sequence Information
- Coding Sequence
- ATGTATTTGAACGAACGGAGACAGgATGAAGTCCTAGCCATCAACGACAAGGTGGTACTCCGGGCTGAGGATCTGCTGAGCTGGGTCTGCCCTGGTGTTGAGTGGCGATGGGGTCTGAAAGCGGTGTGGCGAGGAGCCTGCGCCCCCCCGACAGATCCTCGACTGACTGCGCCCTTGCACCATACCAAGTTGGATTTCAGTGACGTGGAGAAAGAGAAAAGTTCTATAACGGTGGACGCGGAAAGTCCAGGCGTGGTGGTGTTCTCATACCCTCGCTACTGCCGCTACCGGGCGTTGCTCGCGCGTCTCGAGGGTATGCAATCCGACTGGCTGAGGGACTCCTTGGTCGCTGCACTGGGCGGGTACGCTGCACCCACTAAGAACACCACCATATTATATTGCAAGgaTACATTCGAATATCCGGAGCTGGAAGGGCACGAGTTCGTGTGTAACCACCTAGCTCCCAAACTGAAGGGTCGGCCGCGGGGCAGGAGACGGAGGGCCGGTCGACCCTGCTCCAGGGACAGGTCGCCTGACAGATCACCAGATTCGAGGTCTAGTGACAGCGATGCCAGGAATTCGCCGGAaactaaaTCTCCAAGAAGACTGTCATTACGTAACGGAGCACCAGAAAAGGTGGAAGAAGAAAAGAACGAGAAAGAGGGAAACTCCGACGATGAATCTTTCATGCAGACACTGATAGACTTTTACAAAGACAAGAGCGACCAGCTCAGAATAGCGCACACTTTGAAGcacatgTCCCTTCGGTCTGTGTATGCCATGGTGAGTTCGAAGGGCGGCTACGAGACGGTTTGTCGGGAGAAGTTATGGAAGCAACTTTATTCAGATTTAGGGTCTAGGGTCAGAAGAATGTATGAAAGATGTCTTCTTCCATACGAAAATTATGAGAGGCGAAAGAATACGAAGCTTTTGCCAAAGCCAAATGGTAAAATCGACGATACCAAAATAGATACAGTTGAAATATCGGATTCTCCACTTAGAGAGATCAATGTTAAACATAATCTACCAGAGAAGAGGCTCAGGACACCATCCCCGAAAAAAGAAAGGGAGAAGTACGAGCTGGACTGCGAAACGGGAGAAATCAAAGAAGAGTTGATAATCACTTCGAAACCGGCAGAGGAGTTGAATAGAGAGTTTCTAGAATCACTCCCCAAAGAGGAGAAACCCGTGAAGATATCAGTGAAACCGGTGGAAAAGCTGATAGAACCTAGTTTGAAAGACGGGAAGGGTTTCGAAAGTACCACACTGCTGTCGGAGCTGACTAAGCACCATTTTGGTTCTAGCAAAGCTGAAGATAAACAAAACGACAGCAATACCGTATTCGATTTGGCgaagaaactaaatttaaGTAATACAGAATCCAGGCTTCAAAGGGACTTGGGTCCACAGGGCGAGCCAGGCAGACCGAGCTTGTTGGGAGACCGGTACGCCAACGGGCATGACCGAGCGGCCGAGCAGAAGAGCCGTCCGCTGGGCCGCAGCTCGCTCCGCGCGGTGCGGGTCAAGCCGGCCCGGCCCCCGCACAACTCCTCCAACACGCCACCAGCCAGTGTTCGTCCATCGCCACCTCCGGTCACCAACTTCGGCATACACCGGCCGAGGCCGCCGAGTGACGATGATATCGTCGAGgTTCCCTATAAACCTAAAAGTCCAGAAATCATCGACCTCGATGAATATCCAGAAAGTCCTCAAAACGTCAAGAAAAAGAAGCTCGATATCCTTAAGGAAAGGGGTTTGGAAGTTACCGCTTTACCCCCACAGCCTCTTTGGCCACAACAAATACCTAACCCCATTACACCCCTTATTAACCCCAGTCCTATAATCCTTAATCCTACAGTACAACATCAGCTTATGGCTCAAGCACCCCTTTTTCAAATGTATAATCTTATACCTCCCTCTGTTCCTGGGGCAAAAGCTCCTAAAGTCATCCAAGCAGCAAGTGCTTTTGGAAATGCTGGTCCAGAAAAAACTGTTTACGGTCACCCGAAAGACCCATTTATGCCTCCCCCACATGTCCTACAGGGTACCCCTATTAAACCTCAAAGAAGTGTTCAGACGCCCACTCCTACCCCGCAAGATATACTAGATTTGACTTGTAAAACTCAAACACCTCCTTTGCAAAAACCAGCCGTTGAAATAGTCAGAATCCCAAACTCTCCTTCTCCTTCTAAAACCCCTACACCCCAAAATTTAACcaaaaattatactttattagaAGGAAAAGCGGTTGTAGGTTCGAATTTAGAAATAACTTTGGTTAATCCAAAATCCCAGACACCTCCAAAAAGAGGAATTCAAAAAAGATCGTCAAACGGAAAATTTGTGGCCACAAAAACCCCGACACCTCCAAAAGATTACCCCAAACCATACCCCCCACCTTCCCCATCGGGGATCAAAAAGAACCCCATTGTAGTTCCTAATTACCAAATTAACCCACGCGACGACGTATCCCCAACTAGCTCAACCGGGTCAAAGGACTCACAGACCTCGCATCAAAACCTCCAAAATGCGCTAAAGGGTCAAAGTCTTGCACAAATGATGGAAATGCAAAAAACTGTCCCTACATTTTCCCCTTTTATAGACCCTTTGTACATGAACGCATTGTATAGTAGTTTGGGTCAAATGGACCAACGCCAGCTCGCTATGTATAGAGACTTTATGGCTAGTCAATTTAGGGGATATTCGGGGcttttaaatataggtacacCCACAACGAAGAATTAG
- Protein Sequence
- MYLNERRQDEVLAINDKVVLRAEDLLSWVCPGVEWRWGLKAVWRGACAPPTDPRLTAPLHHTKLDFSDVEKEKSSITVDAESPGVVVFSYPRYCRYRALLARLEGMQSDWLRDSLVAALGGYAAPTKNTTILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAGRPCSRDRSPDRSPDSRSSDSDARNSPETKSPRRLSLRNGAPEKVEEEKNEKEGNSDDESFMQTLIDFYKDKSDQLRIAHTLKHMSLRSVYAMVSSKGGYETVCREKLWKQLYSDLGSRVRRMYERCLLPYENYERRKNTKLLPKPNGKIDDTKIDTVEISDSPLREINVKHNLPEKRLRTPSPKKEREKYELDCETGEIKEELIITSKPAEELNREFLESLPKEEKPVKISVKPVEKLIEPSLKDGKGFESTTLLSELTKHHFGSSKAEDKQNDSNTVFDLAKKLNLSNTESRLQRDLGPQGEPGRPSLLGDRYANGHDRAAEQKSRPLGRSSLRAVRVKPARPPHNSSNTPPASVRPSPPPVTNFGIHRPRPPSDDDIVEVPYKPKSPEIIDLDEYPESPQNVKKKKLDILKERGLEVTALPPQPLWPQQIPNPITPLINPSPIILNPTVQHQLMAQAPLFQMYNLIPPSVPGAKAPKVIQAASAFGNAGPEKTVYGHPKDPFMPPPHVLQGTPIKPQRSVQTPTPTPQDILDLTCKTQTPPLQKPAVEIVRIPNSPSPSKTPTPQNLTKNYTLLEGKAVVGSNLEITLVNPKSQTPPKRGIQKRSSNGKFVATKTPTPPKDYPKPYPPPSPSGIKKNPIVVPNYQINPRDDVSPTSSTGSKDSQTSHQNLQNALKGQSLAQMMEMQKTVPTFSPFIDPLYMNALYSSLGQMDQRQLAMYRDFMASQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00256635;
- 90% Identity
- iTF_00256635;
- 80% Identity
- -