Cnem005062.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- JARID2
- Assembly
- GCA_002245505.1
- Location
- NJDD01001623.1:17278-55965[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-14 6e-11 43.2 0.0 7 89 572 651 567 651 0.87
Sequence Information
- Coding Sequence
- ATGCCTCGCCATTGTCTGTTAAGGCCGTCAGTCCATGTTGTGGCGTCACATTCACACTCAGGGCCAAATCCTGTTGTTGTGTTGGAGAGACTCAAACCGCTCGAGCCAGTCGCACCAATCGCACGAAAAGTATCCACCCCGGTCTTAAAGCAAAAAAGAACTATGTGTTTGCGTCCTCGGGCAATTAAACaaagtaaattagttttttcaatAAGACAAAAAAGAAGGCTCGCATCAAAAACGAACAGAGAAAATACAACGACAAACTCAAAGTTGCCAATATTTGGTCTTGATGATGAATTACCCCTGTCATCCTTTCGGAAGAATCCCAATGTCGACAAACGAAAGCCAAATATAGAGGTTGAGCGTGTTGAAAAAGcTTCTAACACAAGCCCAGAGCCAAGAAAACGACCAAAGCCATCTACGGAATCACCGAAAGgtGAACCGTTCTTAAAACCAATGGCTTTAAGAAGGCGCAGGCTAACATCTAGGACCGGGAGTATTGTAGcgTTGAAGTTGAAACGAGgtagaaaaagtaataaaacccGTGCAGAGAAACCCTCGacagaGGCCCGGTGCAGCTCCAACAAtcaattttatagtgaaaaTGAAATTCGAAAATGGATTATCCAAGCTAGGTCGATCACAAACGAGGATTTTAGAAACCTAGGCGACGTTAAAGATGAAAGTGTTCCTCCTCTAGACAAAGCCAACGCTAACACTGGGATAGAATGCCCGTTGGAGAAACTTACCACATTTTATGAAGTTATAACCTGTTCGATGCAAGATTTAAATAATAGAtgtaaaacttgtaaaaattgtaCCAGGATTGACGAACTACTTAAAGTTGATAAACGTTCTGACCAAGAGACGGTAGAAGTGGAAGTACCCGAAGACTCTGAACCTTCATGTTCAGTGGAATCACCAAAAAAACCTACACCGCCACGCCCTGTGAAACCACCCAGTGAACCTAAACCCTCTGGTAGCCAAGACGTAGATCCTACACAAATTATACATCTGTCATCAGATTATAAAGTTGAAAAAGTTGTAGAAGAAGAAAGCTCCGTAAGAAATACTATGTTTACATCCGAACCAAGTAAGTCCACTAATTATAAAGTGTTGAGTTTATTTGCGAATTCAGTAACGAAAATCATAAACATTTGCGATGACATTGCAGATGATACCATATCAATAAAAGAAAGTTCGATTAACGAGAATGAAATTAAAGAAGAAAACGATGATGTCATTTGTATATCTGATAATGAGAAACCAGACGGTCCATCAACACCAGTAAAAGATTATCATAATGTGCCTGGTACATCTAGGAGACAACGAGATTTTGGTGGAAATCCATCGCCAACACATGAATCTACTAACACCGCGGACACCAATGCACAATCAGATAAATCGAAATATCCTCGACGTGGAAGAGGTGCGAAAGTGGATAAACCTCGTCCTGGGTACCTGCAAAGTTTAGATATGCCTAAACTATTGGAGGCACCAACATTTTACCCCACTGAGTTGGAATTcgctgatCCAATTGTGTATTATGAAAAGATAAAGCCCATCGCCTCGAAATTTGGAATCTGCAAAGTAGTTCCACCTAAGGGTTTTGCTCCAGAATGCGTGCTCAATGACAAGAGCAAGTTTACGACGACCAATCAGTACGTCGCCAGACTGTACACACGTTGGGGGCCGGCCTCTCGTGAGATGTGTGCCATGCGTGCCTGTCTGGCTACACATGACGTCCATTTCTCAAAATCACCATTGatgGACGGACTACAAATCAACTTGCCAAAGATGTTCCACACTGTCCAAAGACTAAGAGGCCCTAAGGCTGTATTTGATAAGAAAAAGTGGGCTCGGGTCGCTGAAGAAATGCATTACTTTGATATACTCAACCCAGAGAAGAAACTTGATCAAATCTACGTGAGATATTTGATCCCCTACGACACGTTGACATCCCACGAACGTCAACAAATAATGACTGAGGTTGAAGAACTTTGGTACAAGAAACATAAGAAAATGTTGGAGAGAGCGTTGAACCCCTTGCATAGCCAAAAACAATTACTTGGGGAATCAGATTCTGAATCTGAGGAAGAAGTGGAACAAGACAGTAATTTATCTAAAGCATTGAAGGAGGCAGAGGACTGCATAGTACCTGGGCGTGTCATGAATCTTGTCAGCTTCATGAAGgtgGCCAGCAATGCGTTTAAGCAGTACATGCCTCCAAATGAGACTATTTCGACAAATCTCATAGAAGCCATGTATTGGAAGCTCGTGTTACTCGGCACAGACCACGTGTGTGTCAACAGTGCGTCAGTCGACACCGGTGAAGAGGGTTACGGTTTTATGAAAAGCAAAACTGTCCTGGATGGCAGACACCCGTGGaatttgaagGTACTAAGTCGTAATACGCGCAACCTGCTGAGAAGTCTGGGTTCAGTTCTGGGCGTCACCGTACCAACACTCCACTTGGGAATGATATTTTCTACCAGTTGCTGGCATCGGGACCCCCATGGCTTGCCATGGATAGAATACATGCATAAAGGATCTGAGAAAATCTGgtacGGTATCCCGGACAAAGAGAGCTACAACTTCCGCAAAGCGGTTGAAACGCTATGTCCAACCGTGTGCCAAAATAAAGAGATATGGCTTCCTTCGGATATAACAATGATACCACCGAATCTTCTGATGGAACATCAAGTATCTCTATCACGATTGATACAAAAACCGGGAGAATTCGTCTTCGTATTTCCAAAGGCATACTCCAGTTCCATCTGCACCGGGTTTTGCGTGTCTGAGAGTGTGTATTTTGCAACCAGCGCCTGGCTTTCTACTATACAGCAAGACTTTGAGAAAGTGCGCAAAAGTTGCGAACCGACGACGTTTGCAGTAGAGCAATTACTGATCGCTATAGCAAAGGATTCACGGATTCCCGTGTCGGTGTTGCAACATGTACattccattttaaatattttgatctcGGAAGAAATAAAGAACCGTTTCGAACTGGAAAGTCTAGGCTTGGTGCCCCGTGTGTGTGATCTAAGTCGGAAGCCCTTCAAGACTAGAAAAATGGAACAAGAGGAGGAATGCTATGTGTGCCGGACAAAGCTCTACCTGTCCAAGGTAAGAGGATTTTTGGGCAATAGCTCCGCGATGTGCTTGCAACACGCATTGCGcattttgcaaaacaaaaaCTCGAAGAAGAAACCAGTTGACAGGCTGGAATTGGAAGTTTATGTTACAGTGGATGAGCTCGAACATATTCTGAAAAACCTACAAGATAGACTTATTCCACAAACTAACACCAGCAAATAA
- Protein Sequence
- MPRHCLLRPSVHVVASHSHSGPNPVVVLERLKPLEPVAPIARKVSTPVLKQKRTMCLRPRAIKQSKLVFSIRQKRRLASKTNRENTTTNSKLPIFGLDDELPLSSFRKNPNVDKRKPNIEVERVEKASNTSPEPRKRPKPSTESPKGEPFLKPMALRRRRLTSRTGSIVALKLKRGRKSNKTRAEKPSTEARCSSNNQFYSENEIRKWIIQARSITNEDFRNLGDVKDESVPPLDKANANTGIECPLEKLTTFYEVITCSMQDLNNRCKTCKNCTRIDELLKVDKRSDQETVEVEVPEDSEPSCSVESPKKPTPPRPVKPPSEPKPSGSQDVDPTQIIHLSSDYKVEKVVEEESSVRNTMFTSEPSKSTNYKVLSLFANSVTKIINICDDIADDTISIKESSINENEIKEENDDVICISDNEKPDGPSTPVKDYHNVPGTSRRQRDFGGNPSPTHESTNTADTNAQSDKSKYPRRGRGAKVDKPRPGYLQSLDMPKLLEAPTFYPTELEFADPIVYYEKIKPIASKFGICKVVPPKGFAPECVLNDKSKFTTTNQYVARLYTRWGPASREMCAMRACLATHDVHFSKSPLMDGLQINLPKMFHTVQRLRGPKAVFDKKKWARVAEEMHYFDILNPEKKLDQIYVRYLIPYDTLTSHERQQIMTEVEELWYKKHKKMLERALNPLHSQKQLLGESDSESEEEVEQDSNLSKALKEAEDCIVPGRVMNLVSFMKVASNAFKQYMPPNETISTNLIEAMYWKLVLLGTDHVCVNSASVDTGEEGYGFMKSKTVLDGRHPWNLKVLSRNTRNLLRSLGSVLGVTVPTLHLGMIFSTSCWHRDPHGLPWIEYMHKGSEKIWYGIPDKESYNFRKAVETLCPTVCQNKEIWLPSDITMIPPNLLMEHQVSLSRLIQKPGEFVFVFPKAYSSSICTGFCVSESVYFATSAWLSTIQQDFEKVRKSCEPTTFAVEQLLIAIAKDSRIPVSVLQHVHSILNILISEEIKNRFELESLGLVPRVCDLSRKPFKTRKMEQEEECYVCRTKLYLSKVRGFLGNSSAMCLQHALRILQNKNSKKKPVDRLELEVYVTVDELEHILKNLQDRLIPQTNTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -