Cnem023689.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- Arid4b
- Assembly
- GCA_002245505.1
- Location
- NJDD01003579.1:54945-61623[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-30 1.7e-26 93.0 0.1 1 89 59 145 59 145 0.96
Sequence Information
- Coding Sequence
- TTACACGGTGCCGAAGAAGGAGGCGCGCGAGTTCCGTCGGGGCGGGGCGGCGGCCGAGTGGAGCGGGGTGGGGGCGGCNNNNNNGGCGTGCTGCCGCCGCACTGGGACCGGGACGCGCTCTTCAACGAGCCGCGGAACACCGACGACGACAGCTCGGACGACGAGCCGCGCGAGGAGAAGGACCACTTCGTGGCACAGCTGTACAAGTTCATGGACGACCGCGGCACACCGCTCAACCGCAACCCcaccatcgccaaccgggacatCGGCCTCTACAGGCTCTTCCGGGTAGTCCAGAAACTTGGTGGCTATAACAGAGTGACAAATCAAAACCAGTGGAAAACTATCGCAGACAAAATGGGCTTCCACCCCGTCACCACCAGCATCACCAATCTGTGCAAACAAGCAtataaaaaGTTCCTGCACAGCTTCGAGGACTTCTACCGCAAGTTGGGTGTGACGCTGGTGGCCCACCCCCGCGGCCCCGCCGGCCGCTCCCTCATCCGCGACCGGGACAAGCAACCCCCCACCACCACCGCGCCCGCGCCGCACCCCTCACATCCCACGCACACCTTGCGCAGCAAAGATTCTGATAAAAGTGAGACCGATAAAAGTGAGAAAAGCGAAAAGGAAGATAAAATAGAGAAAAGCGAGAAATCCAAAGACAAACCCCGGACCAGCGACGAGGACGACAGCGCTGACAACCAACCTCTCATTGCTGCAAACcctaagtaa
- Protein Sequence
- LHGAEEGGARVPSGRGGGRVERGGGGXXGVLPPHWDRDALFNEPRNTDDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIGLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGPAGRSLIRDRDKQPPTTTAPAPHPSHPTHTLRSKDSDKSETDKSEKSEKEDKIEKSEKSKDKPRTSDEDDSADNQPLIAANPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00776563;
- 90% Identity
- -
- 80% Identity
- -