Cpyg012142.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Calameuta pygmaea
Gene Symbol
HIVEP2
Assembly
GCA_031762395.1
Location
JASANN010000565.1:102250-120440[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 8e-05 0.0057 17.1 0.6 1 23 179 201 179 201 0.98
2 8 6.9e-05 0.0049 17.3 0.9 1 23 207 231 207 231 0.91
3 8 0.0013 0.096 13.2 0.2 1 21 423 443 423 444 0.95
4 8 1.8e-06 0.00013 22.3 1.6 1 23 1165 1187 1165 1187 0.99
5 8 2e-05 0.0014 19.0 4.3 1 23 1193 1217 1193 1217 0.92
6 8 2.5e-06 0.00018 21.8 0.1 2 23 1892 1913 1891 1913 0.97
7 8 0.00097 0.069 13.7 1.8 1 23 1919 1943 1919 1943 0.92
8 8 0.0017 0.12 12.9 3.3 1 23 1964 1988 1964 1988 0.93

Sequence Information

Coding Sequence
ATGGGCTCTGACCCAAGTTGCATTACACTGGCACTCTTGTCCCAGGGGGTATCTGCTTTGGCCGGATACGTAGGTAGAGACGGTATGGGTGCTATGGAAAATGGTTGTGAGGTAAACGGGACGGGCAGGTGCAAGGATCCTTGTAAACGTGTCCAGGACCTTTATGTTTTGGAATTCCCGTGGTACGGGTTGGCGCCACCTGTTCCTTACTTAGACCCGCCAGAGACCCACACTGTGGCGATGACAGACCCACAgttgaacaataataataacaacaataagaataataataacaacaacgaTGGCGAGCCCAAGTACCTGCacaagaaattcaagaagatGGCCACGACGGAAGTGGCGCCTGTGGAATCTCGGAAGGAGACTTCACCGGATCCCGCCACACCGGAACCTGCTAAGAAGAAGGATACCAGGGACAGCAAGGATGCCAAGGATAACAAGGATAGAAAGGAATCGACCAAGGTTGAAGCGTCTCCGGAACCTGACGGTGAACCCGTCGAGACCAGAAAGAGCGGATACGTCTGTCCCTACTGTAAATTATCCTGCGCGAAACCAAGTGTTCTCCAGAAGCACATCCGGGCCCACACGAATGAAAGGCCCTACCCATGCGTGCTCTGTGGATTCGCCTTTAAGACCAAGTCTAATCTGTACAAGCACAGCAGGTCGAGGGCGCATGTTCTCAAGATGAAAGGAATCGACGCCAGCAAGGTGTCCGAGGATTCGGATATAAGTCTGTCGGATAGCGCCAGTAATGGTACCGGTACGCCACCTCCACCGCCGGCGTCGACTCCCAGCTCTGTCTCCAGCACGAAAACCGTAAGGACCGGTAAGATCTACAAGCCAAAGTTCCACACAGCCCTGCAGAGCGTGAGCAACGACGCCGAGACCTCTTCCCTCTCGTCGAATTCCTCCACGAGCTCCACCTCCAATTCAAAGCCTAACGCGGAACAGCTGCAGGAGCACATCGATAAGATAATCACGGACAATCAGGCCATTGTTGACGCGGTTGATCCGAGACTGCATAAGCTGATGCAGAGGCAGCAGAGCCTTGTGGAGCCGAAACATTGTGAGCAGCCGCTGAATTTATCCTCGGCGGAGGAAACGTCGCCGAGGAAAAGGTGCTACAGCGATAGCTTCGCCCAGGAACTGGATAATCCTCAGAATCCAGAAGGTTCTATAATCAAGGATCTACTTCTGAAGACTCGTGGTCAGAATCCTGAGACCATAGACGCCATTGACTGTGGCAACTTTGTTTGTCCCTTCTGCAAGATTTCATACACGAGTGCTGATAACTTGGACGCTCATAGGAAGTATTATTGCAAGGGTGCATCCGGTGCGAGGAGGGCGGACTTTCAGTTGGACCTTGAGAAGAAAGAATCCGAGTTCGAGGTTAAGtctgattattataatacccTGCAACCCCTACCGTCACCCGGACCTCTTCTGGGCAACACAAGGCTGGTGGACGCCTACGCACCGCCTACTAAGAAACAAAAGTCCGAGACGGTGCCTACTACACTACGTTCACTCGAGGAATTCATTACGAACATTCACTCCAGACCGAATTCATTGCAAATGTTCGGCGGTGAGGTTAGGATACTGGATAATACTGGTGAAACAAAGACCATGAGAATTGAACCGCGGCAAACGAACTCACCAAACGAGCACATTGTCAACAGCAAGTGCGCAACCTCCGCTACTGCATCTATTGTAGTAAGATCTGGTCTTCACTCGGGTGGTACTATGGTTCACAAGCCACCTGGTACACCAGCGAGCACTCCAAGTTCCTCTATATCCCTGCCGAATACTCGGGCCATGCTGGCACCCATCATACCGAACATATCACCACCTAACTTAGCTCCTAGGATGACGTGTTACAATTATCTCGAGCCCCATTTAAATCCCTTGACGAGCATCACTGCCTATAACCCTCTGACCTTACCCCAGGCTGGTATCACTAGCATATTACATGGTGGTAAGGTCATTCCGTACGTTCCTGGTATGCCAGGACCACATACCCTTACTGGAGCACCAACTGTAGACATATCCGGAAGTATCGCGACTGGTGATTCCTCTGGGTACAAGGTGATACCTGGTATACCTGGTCTTCATATGATTCCTCAACCTCTGGATCTTGCTAGTCCGGTCAAAGTTCAGACTCCCAACGTACCCGGGATCCCGGGTCCACTGTCTAATATGCAAATGTCCAGCCTGGGACAGCCACTGGATCTCGCCAGTCCTGCTAAGGATTTTAAGCTCAGCTTTAAAACTCCAAGTAGCGAAGGCTTAAGAAGTGGACTGACCAGTCCCAAAGTTCCTAATGTTAAGGCGGATGCCCCGACGGATAAATACAGAGGAAGGTTATCCACGACGATGACCAGCGAGTTGACTCGGGCCGAGCTCGATCGTCATATCAAGAACAGTGTCGCCATGAAGTATAAGGGAATTGAGAGTCCACGGGATAGACGAGACTGTAGCTATGAAAAAAGTCCTCAAGTGGATAAAGcttttgtttattcaaatGGCGCGATGGATAGCTCTGTCAATACTGTGAATTCTTATGGGAAAACAAGATTCTCACCTAAAACGGTACCAGAGAGCAGAAAAAGATCATCTAACTGGAACGTCACGGAGTTAGAGTCCAGCAGAGCATCAGTGGAGACGCTGAGCCACAGTCCTGTGTCAAAGTACGAGCCACCTTCGCAGGAAAATGGCCGATTAAAGGTCAATCTTCCTGAAGGGAAGACCAAGATAATAGAGAATTATGGTACGGTGAACGGTGCAAAACCAAGAACCGATACTGTAACGCCTGTCATCACTGTGAATCTAGATTCTTCCAAGACAGAAGTGCCAAACAAAACTTCTCTAGAATTAGTCGTTAAGCCAGACAAGTCTGAAGCTAAGTCGCCAAAAAGTTGCGAAAGTGCTAAAGAGGAAACTAACACTAAGTTTTTAAGGCCCACGTCCCTACCGCTGAAGCCGGGTACTTTCACGCCCAAGAGGCATCACGGAATCACACCAACGGCTAATACGCTACCTCTGATAAGTCCCGAAACGCCCAGGCCCAAGAAATCATACGGCCAGTTATATTTAAACGGACATGCCTATACCTACCTGGGCCTCAAGTGTTCCACCAGGGTGTTTTATTGTACCTTAAACAGACCTCAGCCGATGTACGTCTCGCAGCAGCATGGTCTCTCCATGTACTCCAACTGGAAGATTTGCAAGGAGGCCCCACCTGACCTCGACATGGCCCATTATGACTCTAGACACAGACCTCTGAACTACAGCGTCGCTTGGAAGAAGCAGGAAGACATCCTGACGCATTCCTCCCAGAGGCCCACTACTCCCACGAGTCCTGACAGTGGTCTAGAGAGTGATACACCTGAGAAGGCTAAGAGGGTGAAGATCTTCGATGGCGGTTTCGAGAGCAACGAGGATTATACCTACGTAAGAGGTAGAGgtCGAGGTCGATATGTATGCGAGGAGTGTGGCATTCGATGTAAGAAACCATCGATGCTGAAGAAACATATCAGAACTCATACGGACGTTAGACCTTACACCTGCAAGCACTGCGCTTTTAGTTTTAAGACAAAGGGGAACCTCACGAAGCATATGAAGTCCAAAGCTCACTATAAGAAGTGTTTAGAGCTTGGAGTTGTTCCTGTTCCGACGTCCGTGTGCGATGAGAACATCGACAAGGAGGCGATAGCACGATTGGCAGCTGGTGGAGGAAATGCAGAAGAATCTtcggaagaggaggaagagacagATGGAGAGGAGAGTGAAGAGTCCGGGAGCGAGGAGCATGAAGCTGCTCAGAGCCTTTTGAGTTTATCCCAGCGAAGTTCAAACAGGCTTCCGGGATTGTTGCCTTCCGGAAGACCAACCACATATCCCTATACCTTGACCTTACCAACAACTTCGGCCACTACCAGTATAGTGACCAGTGGAACGAATTCGGCCCCTTTGAGTAGTCAGGCAGCTGCAGTAATCCAGAGTGAACTCTCTCATCGATATTACTTCCCGTCTACTCGTGCTGTACCTGAAGAAGCCAGATCTAGTGTTATACAGTCTTCCAAGAAAGAGGATTCCGACGTGGAATTAGAGGAAGTAAGAAGTTCAGAGGTTAGACATCAGTTGCCACAGCCTATAGATCTTACCACGAAACAGACTCCGCAGCCACTTCCATCTCCGATAATTCAACCAGCTAAACCTGCTGATATTATAACACCAGTATCAGAACCTGTGTTGTTACAAACTTTGGTCCAGACCATGGAGAGATTACCCATCCAGGGTAGAGAATGGAAGCAGGATGCAGAGGGTCACATGTTACAAGCTTATCTCACCGAAAGGCACGTCATGGACAGTAAAATCAAACAGCAGTACCGCGTTGGAAATTCAAAGTTGGATAAACACGCGATGGAAAGAGAATTGTACCTGAAACAACAGGATTCGTTAAGGTCAAGACACATGGAGATGAATAGTATACCCACTGTTACTTATACAGATCCTAGTAAGATGCAACACACGATCTTGGAGTCAAGGATAAAGAACATCTCGAAGCAGACTCTGGATGATATTAAACTAGAGATCAGAGAAAAGATCTATCAGAATAATGCTACTATTGAGAGGCGGCCTTTTGACATTGAATCTATTCACAAAGATAAGGATATCTCTGGTAGACTAATAGCGGAACGCGATAACTATGAACGCAGACTAACCAGTCCTGGTGCGCGAATCAATGCTGATTATCCTATAGGTTTGAATAAGAGTAACTCTATGGAGAGGTCTAGCTTCTCTTTAGAATTACCAATTAGAAGTACACCGAGTGTGGAAAGGCAATCTCCAAAGAACTGTAATCTGGAGATGAGTAATAGGATGGCACCAGGGTCGCAGCATGCGATGAACGAGATAGATAGAAATGCAATGTTCACCGcgataaaaatgttaagtgAAATAGAACGACCACGTGAGAGTCATACGCCAAATCAGGAACCTAGACCGCCCAGTCATGAGATGAGGCCACCTTCGACAGAATTGCGAATCCAGAGTCACAGTCCACGTTCCCAGGACATGCGACCGCCTAGTCGTGAGACCAGGATACCAAGTCAGGAATACAGACCACCTAGTAGAGAGCTGAGACCACTTATTCAAGAATTCAAGCTGCCCGGTCAAGAATTGAGGTCGAGCAGTCAAGAATTCAAACCTTTAGGTCAGGATCTGCGACCTAGGGAATTGTCACCAGTACCTGGGTCAGAGATGCGACAAGTCAACTCCGACTCCAGACCGCCTAGTAGAGATACGAGATTACTCGCGGAATTCAGATCCCAACCACAGGAAACCAGACCGAATTTTGAACCAATGCAATCAGGAATTCACGATTCGTCTAAGCACCAGGATAGCCCACGGTCACAAAATATTGATACCAGGAATGCTGAAAGAATCGACATCAAGCATAGCATTGAAATGCCTAAGCAGAATATATCTGAGAACATAAAGCACTCGGTGGCGAGAAAAATGGTCGTAGGTGGTCCAGGATTTCGATCTCCGTCTCCGCCAGGGAGTTCAAAACCGCAGGCGGAATTCTTGCAACCATCTAGCGGACCAGCTCCAAATTATGTTAGTTACAGTGTCACTGAAGATGGCCGTAGTGTCTGCGGTATCTGTAACAAGGTGTTCAGCAAGCCTAGTCAACTAAGGTTGCACATCAACATTCATTATTTTGAGCGACCATTTAGATGCGAGAGTTGTGCTGTCTCCTTTAGAACAAAAGGGCACTTAACAAAGCATGAACGATCAGTCTCTCATCACAACAAGGTCAGCATGACGTCTACCTTCGGAGCTGCCACGACGAGTAATCCCAGGCCTTTCAAATGTACTGACTGTAAGATCGCCTTCAGGATACACGGCCACCTGGCCAAGCATCTCCGAAGTAAAATGCACATAATGAAACTAGAATGCTTGGGTAAACTGCCATTTGGCACATATGCTGAGATGGAAAGGTCAGGTGTCAATCTAAATGACATAGACACTACCGACTGTGATAATAGTCTAACTAGTCTCCAGATTCTGGCTCAAAAGCTTTACGAGAAGGATCCCACTAAGATGGGACAATGGGATGCAGAAATGCTTCCAAACCAGGGTGCCAGTGGTGGTGAAACATCCTCAGACGAGGGTGAGCCAATTCCCCCTCATCCGATGCATCAGTATCCTCCTCAGATGCCATCCGAGAATGATGTTCCACGTGGATACCACATGCCAATCCTCGTCAGTGAGGAGTCCAAGTCCATGAACGACATCAGGCATGCAAATCCACAATTCAGCCAGCCAAGGACGGATTACTCCTTGAAGGAGAGGCAGAATCCACCTAGCAGATCGTTAACGGATGAGGTAAGAGCTGAGGAATTATCCTCTCACATTCAGTGCTACAATTGTCAGCTGTGTACGGCACCCATGCGAACCGTGAACAAACTTCAGGTACATTGTTTCGTCGAGCACAACATCGACGGGGATGCAGTCGCTAATAATCATGGCAGTGGCAGCGTTACTGACATCCGAGACAATGAAAACATTCAGAAGAGGCTGAGAGATGAGACTGTACCAACTACGGATGAGCACAACAGGCAGAAGGTCGACGATACGTAG
Protein Sequence
MGSDPSCITLALLSQGVSALAGYVGRDGMGAMENGCEVNGTGRCKDPCKRVQDLYVLEFPWYGLAPPVPYLDPPETHTVAMTDPQLNNNNNNNKNNNNNNDGEPKYLHKKFKKMATTEVAPVESRKETSPDPATPEPAKKKDTRDSKDAKDNKDRKESTKVEASPEPDGEPVETRKSGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVLCGFAFKTKSNLYKHSRSRAHVLKMKGIDASKVSEDSDISLSDSASNGTGTPPPPPASTPSSVSSTKTVRTGKIYKPKFHTALQSVSNDAETSSLSSNSSTSSTSNSKPNAEQLQEHIDKIITDNQAIVDAVDPRLHKLMQRQQSLVEPKHCEQPLNLSSAEETSPRKRCYSDSFAQELDNPQNPEGSIIKDLLLKTRGQNPETIDAIDCGNFVCPFCKISYTSADNLDAHRKYYCKGASGARRADFQLDLEKKESEFEVKSDYYNTLQPLPSPGPLLGNTRLVDAYAPPTKKQKSETVPTTLRSLEEFITNIHSRPNSLQMFGGEVRILDNTGETKTMRIEPRQTNSPNEHIVNSKCATSATASIVVRSGLHSGGTMVHKPPGTPASTPSSSISLPNTRAMLAPIIPNISPPNLAPRMTCYNYLEPHLNPLTSITAYNPLTLPQAGITSILHGGKVIPYVPGMPGPHTLTGAPTVDISGSIATGDSSGYKVIPGIPGLHMIPQPLDLASPVKVQTPNVPGIPGPLSNMQMSSLGQPLDLASPAKDFKLSFKTPSSEGLRSGLTSPKVPNVKADAPTDKYRGRLSTTMTSELTRAELDRHIKNSVAMKYKGIESPRDRRDCSYEKSPQVDKAFVYSNGAMDSSVNTVNSYGKTRFSPKTVPESRKRSSNWNVTELESSRASVETLSHSPVSKYEPPSQENGRLKVNLPEGKTKIIENYGTVNGAKPRTDTVTPVITVNLDSSKTEVPNKTSLELVVKPDKSEAKSPKSCESAKEETNTKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVSQQHGLSMYSNWKICKEAPPDLDMAHYDSRHRPLNYSVAWKKQEDILTHSSQRPTTPTSPDSGLESDTPEKAKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHYKKCLELGVVPVPTSVCDENIDKEAIARLAAGGGNAEESSEEEEETDGEESEESGSEEHEAAQSLLSLSQRSSNRLPGLLPSGRPTTYPYTLTLPTTSATTSIVTSGTNSAPLSSQAAAVIQSELSHRYYFPSTRAVPEEARSSVIQSSKKEDSDVELEEVRSSEVRHQLPQPIDLTTKQTPQPLPSPIIQPAKPADIITPVSEPVLLQTLVQTMERLPIQGREWKQDAEGHMLQAYLTERHVMDSKIKQQYRVGNSKLDKHAMERELYLKQQDSLRSRHMEMNSIPTVTYTDPSKMQHTILESRIKNISKQTLDDIKLEIREKIYQNNATIERRPFDIESIHKDKDISGRLIAERDNYERRLTSPGARINADYPIGLNKSNSMERSSFSLELPIRSTPSVERQSPKNCNLEMSNRMAPGSQHAMNEIDRNAMFTAIKMLSEIERPRESHTPNQEPRPPSHEMRPPSTELRIQSHSPRSQDMRPPSRETRIPSQEYRPPSRELRPLIQEFKLPGQELRSSSQEFKPLGQDLRPRELSPVPGSEMRQVNSDSRPPSRDTRLLAEFRSQPQETRPNFEPMQSGIHDSSKHQDSPRSQNIDTRNAERIDIKHSIEMPKQNISENIKHSVARKMVVGGPGFRSPSPPGSSKPQAEFLQPSSGPAPNYVSYSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLTSLQILAQKLYEKDPTKMGQWDAEMLPNQGASGGETSSDEGEPIPPHPMHQYPPQMPSENDVPRGYHMPILVSEESKSMNDIRHANPQFSQPRTDYSLKERQNPPSRSLTDEVRAEELSSHIQCYNCQLCTAPMRTVNKLQVHCFVEHNIDGDAVANNHGSGSVTDIRDNENIQKRLRDETVPTTDEHNRQKVDDT