Basic Information

Insect: Calameuta pygmaea
Gene Symbol: -
Assembly: GCA_031762395.1
Location: JASANN010000352.1:1815048-1817902[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.2e-05 0.048 13.7 2.6 4 44 32 68 29 68 0.84

2 11 0.054 82 3.4 1.0 17 29 75 87 69 99 0.82

3 11 0.12 1.8e+02 2.3 0.4 17 31 104 118 91 123 0.79

4 11 0.00018 0.28 11.3 1.3 8 29 124 144 117 154 0.80

5 11 0.00041 0.62 10.2 0.2 18 40 160 179 146 182 0.89

6 11 0.15 2.3e+02 1.9 0.4 18 29 188 199 183 207 0.83

7 11 0.035 53 4.0 2.4 12 41 210 236 204 238 0.79

8 11 0.071 1.1e+02 3.0 1.6 4 29 231 255 228 263 0.75

9 11 0.0032 4.9 7.3 0.7 5 44 260 295 256 295 0.84

10 11 0.017 26 5.0 0.1 16 41 301 323 297 325 0.87

11 11 0.001 1.6 8.9 1.9 15 43 328 353 322 354 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.2e-05	0.048	13.7	2.6	4	44	32	68	29	68	0.84
2	11	0.054	82	3.4	1.0	17	29	75	87	69	99	0.82
3	11	0.12	1.8e+02	2.3	0.4	17	31	104	118	91	123	0.79
4	11	0.00018	0.28	11.3	1.3	8	29	124	144	117	154	0.80
5	11	0.00041	0.62	10.2	0.2	18	40	160	179	146	182	0.89
6	11	0.15	2.3e+02	1.9	0.4	18	29	188	199	183	207	0.83
7	11	0.035	53	4.0	2.4	12	41	210	236	204	238	0.79
8	11	0.071	1.1e+02	3.0	1.6	4	29	231	255	228	263	0.75
9	11	0.0032	4.9	7.3	0.7	5	44	260	295	256	295	0.84
10	11	0.017	26	5.0	0.1	16	41	301	323	297	325	0.87
11	11	0.001	1.6	8.9	1.9	15	43	328	353	322	354	0.86

Sequence Information

Coding Sequence: ATGGATGTCACTATAGTATTAGAGGGACATAAATCTGATCAACTTAGTAATATTGGATCCAGCGAGAAGCAACAAGTAAGAGTAGAGAAGCATTATAAATACAGCCATGAAAACGCCTCAGAAAATGTACAAGGTTGCAATGCATGTGGTAAACAATTAAATAGTCTAAAAACTCTAAGGACTCACATTAAAATGAAGCATAGCCAAAGTAACAGGCAAGGATTTCGCTGTCGCCTCTGTGaagagaaattcaataaaaaagagGACAGAAAGCTTCATTATGAGAAAATCCATTGTGGAGAGAGTCCATTCATATGCATGGATTGCGGAAAGGGATTCTCTAGTAAATCAGGACTATATGGTCATCGACAACTTCACAAAAAAGACCAACAATCAACTTGCCAATATTGTGGAAAAATCTTTAACAGGCGAGACAGCTATCACGAACACGTTCTCATCCATGTGGGTCCTCGGCATCGCTGTCCCTACTGCCCAAAAGAATTTGTGCAGCGTAGTAATCTCATACGTCATATACGAATTCATACAGGACAGAAACCGTATTCCTGCACCTTTTGCGAGAAACGCTTCTCCGACAAGGGTGCTTGTAATTCGCATATTCGAGTTCATACAAAGGAGGAGCAATGTGCCTGCCCATATTGTGGTCAAGTTTTCACTAAGAAACAAAAGTTGAAATATCATATTCGCAAACATACCGGGGAAGGTTTATTGAGTTGTGAGATTTGTGCAAAAACTTTTACAAATACTTTTGCCTTGAAGGAGCACAGAACTATTCACGATAGGCAAACACAAATGATGTGTATAGAATGTGGAAGAGCTTTTAGTAATCAAAAATACCTAGAAAGACACATGGCTACTGTACATCCTGGTCCTgaatctttatcttttacctGTCCAATCTGTGATAAAGTTTTTCATCAACAGTCCAGACTGAAatACCACATCGTAACGCATACtgagaagaaatattttgattgtGAACTCTGCGGAAAACGCTATAGCACCAGAAAGTCTATGCAAAATCATTTACAACGGTATCATGATCGCCAGAGTAATGGAGTGGAGTATAAGAGTGCTAAAACTAATATGCTCGACGAAGTGGAATTGAAGAATACAGCAGGTGTTGATTGGATATCAAAGAAAGATGAATTAGTTGCTGAAAAGCTGCTTAATGGAAAGTGCGAGCCAGATGAAATTGGAATGCCAGAAGATggtaagaatataaattttgcacgCGGCTCTTATGATGAACGACTGAACGGCATAGGGCCGCTCACGAACAAAGAATCCGTtccaaagaaagaagataaaagttTACTTGATGTTAACTCCGTACTGAATGAATGGATGAATGCAATGTATAAACAAAATCTTGCGTTGGTATCTACCGGGAAAATCAATGGAGCGGAAAAACATTGCCAAAATAATTGTGACAAAGCCTTAAATTTAGTCAAATTTACCGCAACATCTGCGAGTAGTAATGAAGATTTAGAAAGTAGTACTTCTAAAGTACTCATAACTCAAGGTCAGTATTCACGAAACGAACAATCCATATCTGATAATCAGAAAGTAATTAATGATGGAGCGCTAACTTTGTTACATGAAAgaggtaaaataaatgaagttgATGTTAAATCTACCGGTTCAAACGAAACAGTGAAATATATCGAAAAGTTGAACGCAAGCACGTcaaaagtaatatataatcgtcgaaaatatttgacaaaacCGAAAAAGTACGTTCCTTCCATTAATGTTGAACGTGCGGAAAAGCATGAATTAACGTATGAATTCGAGAAAAACAGGATAGATGCGCCTAATGTTTCATTCGAATGa
Protein Sequence: MDVTIVLEGHKSDQLSNIGSSEKQQVRVEKHYKYSHENASENVQGCNACGKQLNSLKTLRTHIKMKHSQSNRQGFRCRLCEEKFNKKEDRKLHYEKIHCGESPFICMDCGKGFSSKSGLYGHRQLHKKDQQSTCQYCGKIFNRRDSYHEHVLIHVGPRHRCPYCPKEFVQRSNLIRHIRIHTGQKPYSCTFCEKRFSDKGACNSHIRVHTKEEQCACPYCGQVFTKKQKLKYHIRKHTGEGLLSCEICAKTFTNTFALKEHRTIHDRQTQMMCIECGRAFSNQKYLERHMATVHPGPESLSFTCPICDKVFHQQSRLKYHIVTHTEKKYFDCELCGKRYSTRKSMQNHLQRYHDRQSNGVEYKSAKTNMLDEVELKNTAGVDWISKKDELVAEKLLNGKCEPDEIGMPEDGKNINFARGSYDERLNGIGPLTNKESVPKKEDKSLLDVNSVLNEWMNAMYKQNLALVSTGKINGAEKHCQNNCDKALNLVKFTATSASSNEDLESSTSKVLITQGQYSRNEQSISDNQKVINDGALTLLHERGKINEVDVKSTGSNETVKYIEKLNASTSKVIYNRRKYLTKPKKYVPSINVERAEKHELTYEFEKNRIDAPNVSFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00294653;
90% Identity: iTF_01474892;
80% Identity: iTF_00255265;